Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:20 (2774376): wrapper (7.7.26015): starting
00:00:20 (2774376): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:00:20] Arguments: --nthreads 9
[2025-11-27 00:00:20] Threads: 9
[2025-11-27 00:00:20] Checking for CVMFS
[2025-11-27 00:00:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:00:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:00:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:00:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:00:21] 2.13.3.0 11502 30996 352296 153347 1 834 18723298 32935937 68581 16776704 0 304524112 99.633 285570745 36501 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:00:21] CVMFS is ok
[2025-11-27 00:00:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:00:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:00:21] Further information can be found at the LHC@home message board.
[2025-11-27 00:00:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:00:21] Checking for apptainer binary...
[2025-11-27 00:00:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:00:21] Running /usr/bin/apptainer --version
[2025-11-27 00:00:21] apptainer version 1.4.4-1.el9
[2025-11-27 00:00:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:00:22] c7-2-15.aglt2.org
[2025-11-27 00:00:22] apptainer works
[2025-11-27 00:00:22] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:00:22] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:00:22] Starting ATLAS job with PandaID=6898039685
[2025-11-27 00:00:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 22:30:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 22:30:36] 2025-11-28 03:29:45,910 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 22:30:36] 2025-11-28 03:29:45,910 | INFO     | log transfer has been attempted: DONE
[2025-11-27 22:30:36] 2025-11-28 03:29:45,911 | INFO     | job 6898039685 has finished - writing final server update
[2025-11-27 22:30:36] 2025-11-28 03:29:45,911 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 22:30:36] 2025-11-28 03:29:45,941 | INFO     | executing command: lscpu
[2025-11-27 22:30:36] 2025-11-28 03:29:46,034 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 22:30:36] 2025-11-28 03:29:47,421 | INFO     | time since job start (80922s) is within the limit (172800.0s)
[2025-11-27 22:30:36] 2025-11-28 03:29:47,663 | INFO     | monitor loop #4681: job 0:6898039685 is in state 'finished'
[2025-11-27 22:30:36] 2025-11-28 03:29:47,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:30:36] 2025-11-28 03:29:50,226 | INFO     | monitor loop #4682: job 0:6898039685 is in state 'finished'
[2025-11-27 22:30:36] 2025-11-28 03:29:50,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:30:36] 2025-11-28 03:29:50,817 | INFO     | PID=2779934 has CPU usage=17.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 22:30:36] 2025-11-28 03:29:50,818 | INFO     | .. there are 95 such processes running
[2025-11-27 22:30:36] 2025-11-28 03:29:51,841 | INFO     | time since job start (80926s) is within the limit (172800.0s)
[2025-11-27 22:30:36] 2025-11-28 03:29:52,747 | INFO     | monitor loop #4683: job 0:6898039685 is in state 'finished'
[2025-11-27 22:30:36] 2025-11-28 03:29:52,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 22:30:36] 2025-11-28 03:29:53,859 | INFO     | time since job start (80928s) is within the limit (172800.0s)
[2025-11-27 22:30:36] 2025-11-28 03:29:54,388 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 22:30:36] 2025-11-28 03:29:54,394 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3317.8024687499988
[2025-11-27 22:30:36] 2025-11-28 03:29:54,409 | INFO     | using path: /tmp/boinchome/slots/9/PanDA_Pilot-6898039685/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 22:30:36] 2025-11-28 03:29:54,410 | INFO     | extracted standard info from prmon json
[2025-11-27 22:30:36] 2025-11-28 03:29:54,410 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 22:30:36] 2025-11-28 03:29:54,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 22:30:36] 2025-11-28 03:29:54,428 | INFO     | fitting pss+swap vs Time
[2025-11-27 22:30:36] 2025-11-28 03:29:54,429 | INFO     | sum of square deviations: 721322369303.3629
[2025-11-27 22:30:36] 2025-11-28 03:29:54,506 | INFO     | sum of deviations: 5451837176923.452
[2025-11-27 22:30:36] 2025-11-28 03:29:54,508 | INFO     | mean x: 1764260129.594717
[2025-11-27 22:30:36] 2025-11-28 03:29:54,508 | INFO     | mean y: 2961965.522264151
[2025-11-27 22:30:36] 2025-11-28 03:29:54,508 | INFO     | intersect: -13331518391.128202
[2025-11-27 22:30:36] 2025-11-28 03:29:54,509 | INFO     | chi2: 18.452873242455098
[2025-11-27 22:30:36] 2025-11-28 03:29:54,511 | INFO     | sum of square deviations: 713187536181.599
[2025-11-27 22:30:36] 2025-11-28 03:29:54,699 | INFO     | sum of deviations: 5869097845269.306
[2025-11-27 22:30:36] 2025-11-28 03:29:54,699 | INFO     | mean x: 1764259977.0969696
[2025-11-27 22:30:36] 2025-11-28 03:29:54,699 | INFO     | mean y: 2969787.7007575757
[2025-11-27 22:30:36] 2025-11-28 03:29:54,700 | INFO     | intersect: -14515812306.435703
[2025-11-27 22:30:36] 2025-11-28 03:29:54,701 | INFO     | chi2: 15.777634392993336
[2025-11-27 22:30:36] 2025-11-28 03:29:54,701 | INFO     | current chi2=15.777634392993336 (change=14.49768182066496 %)
[2025-11-27 22:30:36] 2025-11-28 03:29:54,701 | INFO     | right removable region: 1319
[2025-11-27 22:30:36] 2025-11-28 03:29:54,702 | INFO     | sum of square deviations: 713187055501.5992
[2025-11-27 22:30:36] 2025-11-28 03:29:54,877 | INFO     | sum of deviations: 4915852690631.684
[2025-11-27 22:30:36] 2025-11-28 03:29:54,878 | INFO     | mean x: 1764260282.0969696
[2025-11-27 22:30:36] 2025-11-28 03:29:54,878 | INFO     | mean y: 2972011.6196969696
[2025-11-27 22:30:36] 2025-11-28 03:29:54,878 | INFO     | intersect: -12157713726.880156
[2025-11-27 22:30:36] 2025-11-28 03:29:54,879 | INFO     | chi2: 14.40465967917598
[2025-11-27 22:30:36] 2025-11-28 03:29:54,879 | INFO     | current chi2=14.40465967917598 (change=21.938120476356318 %)
[2025-11-27 22:30:36] 2025-11-28 03:29:54,879 | INFO     | left removable region: 10
[2025-11-27 22:30:36] 2025-11-28 03:29:54,880 | INFO     | sum of square deviations: 695505730185.6343
[2025-11-27 22:30:36] 2025-11-28 03:29:55,046 | INFO     | sum of deviations: 4952085074239.954
[2025-11-27 22:30:36] 2025-11-28 03:29:55,047 | INFO     | mean x: 1764260251.6019862
[2025-11-27 22:30:36] 2025-11-28 03:29:55,047 | INFO     | mean y: 2990920.475935829
[2025-11-27 22:30:36] 2025-11-28 03:29:55,047 | INFO     | intersect: -12558755848.599756
[2025-11-27 22:30:36] 2025-11-28 03:29:55,058 | INFO     | chi2: 7.841266346672007
[2025-11-27 22:30:36] 2025-11-28 03:29:55,058 | INFO     | current memory leak: 7.12 B/s (using 1309 data points, chi2=7.84)
[2025-11-27 22:30:36] 2025-11-28 03:29:55,059 | INFO     | could have reported an average CPU frequency of 3296 MHz (48 samples)
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | ..............................
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . Timing measurements:
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . get job = 0 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . initial setup = 4 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . payload setup = 21 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . stage-in = 0 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . payload execution = 80841 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . stage-out = 8 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | . log creation = 2 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,060 | INFO     | ..............................
[2025-11-27 22:30:36] 2025-11-28 03:29:55,608 | INFO     | 
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | job summary report
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | --------------------------------------------------
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | PanDA job id: 6898039685
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | task id: 47556161
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | errors: (none)
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | pilot state: finished 
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | transexitcode: 0
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | exeerrorcode: 0
[2025-11-27 22:30:36] 2025-11-28 03:29:55,609 | INFO     | exeerrordiag: 
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | exitcode: 0
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | exitmsg: OK
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | cpuconsumptiontime: 187265 s
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | nevents: 1000
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | neventsw: 0
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | pid: 2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | pgrp: 2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | corecount: 9
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | event service: False
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | sizes: {0: 2283436, 1: 2284292, 2: 2284292, 12: 2284320, 21: 2284610, 23: 2284638, 80868: 2347949, 80877: 2356943, 80880: 2356999, 80890: 2357245}
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | --------------------------------------------------
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | 
[2025-11-27 22:30:36] 2025-11-28 03:29:55,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 22:30:36] 2025-11-28 03:29:55,651 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,651 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,651 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,651 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,652 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 22:30:36] 2025-11-28 03:29:55,653 | INFO     | job 6898039685 has completed (purged errors)
[2025-11-27 22:30:36] 2025-11-28 03:29:55,653 | INFO     | overall cleanup function is called
[2025-11-27 22:30:36] 2025-11-28 03:29:56,741 | INFO     | --- collectZombieJob: --- 10, [2801610]
[2025-11-27 22:30:36] 2025-11-28 03:29:56,742 | INFO     | zombie collector waiting for pid 2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:56,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 22:30:36] 2025-11-28 03:29:56,742 | INFO     | collected zombie processes
[2025-11-27 22:30:36] 2025-11-28 03:29:56,742 | INFO     | will attempt to kill all subprocesses of pid=2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:57,883 | INFO     | process IDs to be killed: [2801610] (in reverse order)
[2025-11-27 22:30:36] 2025-11-28 03:29:58,192 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 22:30:36] 2025-11-28 03:29:58,192 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 22:30:36] 2025-11-28 03:29:58,235 | INFO     | did not find any defunct processes belonging to 2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:58,307 | INFO     | did not find any defunct processes belonging to 2801610
[2025-11-27 22:30:36] 2025-11-28 03:29:58,320 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 22:30:36] 2025-11-28 03:29:58,320 | INFO     | ready for new job
[2025-11-27 22:30:36] 2025-11-28 03:29:58,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 22:30:36] 2025-11-28 03:29:58,345 | INFO     | ***************************************
[2025-11-27 22:30:36] 2025-11-28 03:29:58,346 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 22:30:36] 2025-11-28 03:29:58,346 | INFO     | ***************************************
[2025-11-27 22:30:36] 2025-11-28 03:29:58,346 | INFO     | 
[2025-11-27 22:30:36] 2025-11-28 03:29:58,393 | INFO     | architecture information:
[2025-11-27 22:30:36] 2025-11-28 03:29:58,418 | INFO     | executing command: cat /etc/os-release
[2025-11-27 22:30:36] 2025-11-28 03:29:58,497 | INFO     | cat /etc/os-release:
[2025-11-27 22:30:36] NAME="CentOS Linux"
[2025-11-27 22:30:36] VERSION="7 (Core)"
[2025-11-27 22:30:36] ID="centos"
[2025-11-27 22:30:36] ID_LIKE="rhel fedora"
[2025-11-27 22:30:36] VERSION_ID="7"
[2025-11-27 22:30:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 22:30:36] ANSI_COLOR="0;31"
[2025-11-27 22:30:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 22:30:36] HOME_URL="https://www.centos.org/"
[2025-11-27 22:30:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 22:30:36] 
[2025-11-27 22:30:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 22:30:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 22:30:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 22:30:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 22:30:36] 
[2025-11-27 22:30:36] 2025-11-28 03:29:58,498 | INFO     | ***************************************
[2025-11-27 22:30:36] 2025-11-28 03:29:59,002 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 22:30:36] 2025-11-28 03:29:59,036 | INFO     | sufficient remaining disk space (69441945600 B)
[2025-11-27 22:30:36] 2025-11-28 03:29:59,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 22:30:36] 2025-11-28 03:29:59,037 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 22:30:36] 2025-11-28 03:29:59,037 | INFO     | update_server=False
[2025-11-27 22:30:36] 2025-11-28 03:29:59,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 22:30:36] 2025-11-28 03:29:59,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 22:30:36] 2025-11-28 03:29:59,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:30:36] 2025-11-28 03:29:59,042 | INFO     | aborting loop
[2025-11-27 22:30:36] 2025-11-28 03:29:59,264 | INFO     | all job control threads have been joined
[2025-11-27 22:30:36] 2025-11-28 03:29:59,718 | INFO     | all data control threads have been joined
[2025-11-27 22:30:36] 2025-11-28 03:30:00,043 | INFO     | [job] retrieve thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,048 | INFO     | [job] job monitor thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,151 | INFO     | all payload control threads have been joined
[2025-11-27 22:30:36] 2025-11-28 03:30:00,266 | INFO     | [payload] failed_post thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,272 | INFO     | [job] control thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,306 | INFO     | [payload] validate_post thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,472 | INFO     | [data] copytool_in thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,476 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,524 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 22:30:36] 2025-11-28 03:30:00,725 | INFO     | [data] control thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,805 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:00,809 | INFO     | [job] validate thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:01,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 22:30:36] 2025-11-28 03:30:01,045 | INFO     | [data] copytool_out thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:01,146 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:01,158 | INFO     | [payload] control thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:01,638 | INFO     | [job] queue monitor thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:05,046 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 22:30:36] 2025-11-28 03:30:28,380 | INFO     | [monitor] cgroup control has ended
[2025-11-27 22:30:36] 2025-11-28 03:30:28,567 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403811575616)>', '<ExcThread(monitor, started 140403437180672)>']
[2025-11-27 22:30:36] 2025-11-28 03:30:30,188 | INFO     | PID=2779934 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 22:30:36] 2025-11-28 03:30:30,188 | INFO     | .. there are 95 such processes running
[2025-11-27 22:30:36] 2025-11-28 03:30:30,189 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 22:30:36] 2025-11-28 03:30:30,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 22:30:36] 2025-11-28 03:30:30,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 22:30:36] 2025-11-28 03:30:30,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 22:30:36] 2025-11-28 03:30:30,189 | INFO     | [monitor] control thread has ended
[2025-11-27 22:30:36] 2025-11-28 03:30:33,593 | INFO     | all workflow threads have been joined
[2025-11-27 22:30:36] 2025-11-28 03:30:33,594 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 22:30:36] 2025-11-28 03:30:33,594 | INFO     | traces error code: 0
[2025-11-27 22:30:36] 2025-11-28 03:30:33,594 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 22:30:36] 2025-11-28 03:30:35,107 [wrapper] ==== pilot stdout END ====
[2025-11-27 22:30:36] 2025-11-28 03:30:35,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 22:30:36] 2025-11-28 03:30:35,155 [wrapper] pilotpid: 2779934
[2025-11-27 22:30:36] 2025-11-28 03:30:35,178 [wrapper] Pilot exit status: 0
[2025-11-27 22:30:36] 2025-11-28 03:30:35,213 [wrapper] pandaids: 6898039685
[2025-11-27 22:30:36] 2025-11-28 03:30:35,500 [wrapper] cleanup supervisor_pilot 3282242 2779935
[2025-11-27 22:30:36] 2025-11-28 03:30:35,510 [wrapper] Test setup, not cleaning
[2025-11-27 22:30:36] 2025-11-28 03:30:35,554 [wrapper] apfmon messages muted
[2025-11-27 22:30:36] 2025-11-28 03:30:35,578 [wrapper] ==== wrapper stdout END ====
[2025-11-27 22:30:36] 2025-11-28 03:30:35,596 [wrapper] ==== wrapper stderr END ====
[2025-11-27 22:30:36]  *** Error codes and diagnostics ***
[2025-11-27 22:30:36]     "exeErrorCode": 0,
[2025-11-27 22:30:36]     "exeErrorDiag": "",
[2025-11-27 22:30:36]     "pilotErrorCode": 0,
[2025-11-27 22:30:36]     "pilotErrorDiag": "",
[2025-11-27 22:30:36]  *** Listing of results directory ***
[2025-11-27 22:30:36] total 1309312
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:02 queuedata.json
[2025-11-27 22:30:36] -rwx------. 1 boincer umatlas     36292 Nov 25 22:03 runpilot2-wrapper.sh
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 22:30:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:00 run_atlas
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:00 job.xml
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas 409834379 Nov 27 00:00 EVNT.47483658._002404.pool.root.1
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:00 start_atlas.sh
[2025-11-27 22:30:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:00 shared
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:00 input.tar.gz
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:00 boinc_lockfile
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:00 pandaJob.out
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas        57 Nov 27 00:00 setup.sh.local
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas    991570 Nov 27 00:01 agis_schedconf.cvmfs.json
[2025-11-27 22:30:36] drwx------. 5 boincer umatlas      4096 Nov 27 00:01 pilot3
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas       532 Nov 27 22:08 boinc_task_state.xml
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 22:27 init_data.xml
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas 901879539 Nov 27 22:28 HITS.47556161._003865.pool.root.1
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas      1063 Nov 27 22:29 memory_monitor_summary.json
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas   1516240 Nov 27 22:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas   2488297 Nov 27 22:29 log.47556161._003865.job.log.tgz.1
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas      8613 Nov 27 22:29 heartbeat.json
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas        95 Nov 27 22:30 pilot_heartbeat.json
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas      4824 Nov 27 22:30 pilotlog.txt
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 22:30 boinc_mmap_file
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas        29 Nov 27 22:30 wrapper_checkpoint.txt
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas  10060478 Nov 27 22:30 log.47556161._003865.job.log.1
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas       353 Nov 27 22:30 output.list
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas       620 Nov 27 22:30 runtime_log
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas  12564480 Nov 27 22:30 result.tar.gz
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 22:30 runtime_log.err
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas       663 Nov 27 22:30 0TnKDmnzKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKmMKDmWHMNYo.diag
[2025-11-27 22:30:36] -rw-r--r--. 1 boincer umatlas     21882 Nov 27 22:30 stderr.txt
[2025-11-27 22:30:36] HITS file was successfully produced:
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas 901879539 Nov 27 22:28 shared/HITS.pool.root.1
[2025-11-27 22:30:36]  *** Contents of shared directory: ***
[2025-11-27 22:30:36] total 1293852
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas 409834379 Nov 27 00:00 ATLAS.root_0
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:00 start_atlas.sh
[2025-11-27 22:30:36] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:00 input.tar.gz
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas 901879539 Nov 27 22:28 HITS.pool.root.1
[2025-11-27 22:30:36] -rw-------. 1 boincer umatlas  12564480 Nov 27 22:30 result.tar.gz
22:30:37 (2774376): run_atlas exited; CPU time 189492.694648
22:30:37 (2774376): called boinc_finish(0)

</stderr_txt>
]]>

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