Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:54:55 (7822): wrapper (7.7.26015): starting
18:54:55 (7822): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:54:55] Arguments: --nthreads 8
[2025-11-26 18:54:55] Threads: 8
[2025-11-26 18:54:55] Checking for CVMFS
[2025-11-26 18:54:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:54:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:54:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:54:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:54:55] 2.11.2.0 2466 118356 135112 153340 0 82 11922279 18432000 1885 130560 0 84100325 99.973 5103428 28312 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:54:55] CVMFS is ok
[2025-11-26 18:54:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:54:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:54:55] Further information can be found at the LHC@home message board.
[2025-11-26 18:54:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:54:55] Checking for apptainer binary...
[2025-11-26 18:54:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:54:55] Running /usr/bin/apptainer --version
[2025-11-26 18:54:55] apptainer version 1.3.2-1.el7
[2025-11-26 18:54:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:54:56] c-206-20.aglt2.org
[2025-11-26 18:54:56] apptainer works
[2025-11-26 18:54:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:54:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:54:56] Starting ATLAS job with PandaID=6896990443
[2025-11-26 18:54:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:52:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:52:28] 2025-11-27 18:51:54,203 | INFO     | monitor loop #4884: job 0:6896990443 is in state 'finished'
[2025-11-27 13:52:28] 2025-11-27 18:51:54,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,307 | INFO     | time since job start (68208s) is within the limit (172800.0s)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,614 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 13:52:28] 2025-11-27 18:51:55,620 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5
[2025-11-27 13:52:28] 2025-11-27 18:51:55,625 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896990443/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,625 | INFO     | extracted standard info from prmon json
[2025-11-27 13:52:28] 2025-11-27 18:51:55,626 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:52:28] 2025-11-27 18:51:55,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:52:28] 2025-11-27 18:51:55,646 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:52:28] 2025-11-27 18:51:55,647 | INFO     | sum of square deviations: 433314989253.579
[2025-11-27 13:52:28] 2025-11-27 18:51:55,669 | INFO     | sum of deviations: 1918735306565.5312
[2025-11-27 13:52:28] 2025-11-27 18:51:55,669 | INFO     | mean x: 1764235402.1010733
[2025-11-27 13:52:28] 2025-11-27 18:51:55,669 | INFO     | mean y: 2854174.8890876565
[2025-11-27 13:52:28] 2025-11-27 18:51:55,669 | INFO     | intersect: -7809247504.158026
[2025-11-27 13:52:28] 2025-11-27 18:51:55,670 | INFO     | chi2: 6.58166087170977
[2025-11-27 13:52:28] 2025-11-27 18:51:55,671 | INFO     | sum of square deviations: 427527448484.26385
[2025-11-27 13:52:28] 2025-11-27 18:51:55,693 | INFO     | sum of deviations: 2262512245750.79
[2025-11-27 13:52:28] 2025-11-27 18:51:55,693 | INFO     | mean x: 1764235249.6037736
[2025-11-27 13:52:28] 2025-11-27 18:51:55,693 | INFO     | mean y: 2863228.4303683736
[2025-11-27 13:52:28] 2025-11-27 18:51:55,694 | INFO     | intersect: -9333622348.730555
[2025-11-27 13:52:28] 2025-11-27 18:51:55,695 | INFO     | chi2: 3.758111464658269
[2025-11-27 13:52:28] 2025-11-27 18:51:55,695 | INFO     | current chi2=3.758111464658269 (change=42.90025666907395 %)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,696 | INFO     | sum of square deviations: 421791676127.4329
[2025-11-27 13:52:28] 2025-11-27 18:51:55,717 | INFO     | sum of deviations: 2453390666899.2935
[2025-11-27 13:52:28] 2025-11-27 18:51:55,717 | INFO     | mean x: 1764235097.1064982
[2025-11-27 13:52:28] 2025-11-27 18:51:55,717 | INFO     | mean y: 2868303.3619133574
[2025-11-27 13:52:28] 2025-11-27 18:51:55,717 | INFO     | intersect: -10258969865.652962
[2025-11-27 13:52:28] 2025-11-27 18:51:55,718 | INFO     | chi2: 2.8214063579735127
[2025-11-27 13:52:28] 2025-11-27 18:51:55,718 | INFO     | current chi2=2.8214063579735127 (change=24.924888883516193 %)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,719 | INFO     | right removable region: 1107
[2025-11-27 13:52:28] 2025-11-27 18:51:55,720 | INFO     | sum of square deviations: 427527038564.264
[2025-11-27 13:52:28] 2025-11-27 18:51:55,761 | INFO     | sum of deviations: 1632019147062.302
[2025-11-27 13:52:28] 2025-11-27 18:51:55,761 | INFO     | mean x: 1764235554.6037736
[2025-11-27 13:52:28] 2025-11-27 18:51:55,761 | INFO     | mean y: 2861720.451931716
[2025-11-27 13:52:28] 2025-11-27 18:51:55,762 | INFO     | intersect: -6731837948.394017
[2025-11-27 13:52:28] 2025-11-27 18:51:55,763 | INFO     | chi2: 4.563415257156121
[2025-11-27 13:52:28] 2025-11-27 18:51:55,763 | INFO     | current chi2=4.563415257156121 (change=30.66468561497538 %)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,765 | INFO     | sum of square deviations: 421791059845.0641
[2025-11-27 13:52:28] 2025-11-27 18:51:55,793 | INFO     | sum of deviations: 1561868621478.8154
[2025-11-27 13:52:28] 2025-11-27 18:51:55,793 | INFO     | mean x: 1764235707.1037905
[2025-11-27 13:52:28] 2025-11-27 18:51:55,793 | INFO     | mean y: 2863585.1146209384
[2025-11-27 13:52:28] 2025-11-27 18:51:55,793 | INFO     | intersect: -6530002220.125717
[2025-11-27 13:52:28] 2025-11-27 18:51:55,794 | INFO     | chi2: 4.5157451026769495
[2025-11-27 13:52:28] 2025-11-27 18:51:55,794 | INFO     | current chi2=4.5157451026769495 (change=1.0446157492333796 %)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,795 | INFO     | left removable region: 20
[2025-11-27 13:52:28] 2025-11-27 18:51:55,796 | INFO     | sum of square deviations: 398260392798.3923
[2025-11-27 13:52:28] 2025-11-27 18:51:55,824 | INFO     | sum of deviations: 2037183050025.063
[2025-11-27 13:52:28] 2025-11-27 18:51:55,825 | INFO     | mean x: 1764235676.6108556
[2025-11-27 13:52:28] 2025-11-27 18:51:55,825 | INFO     | mean y: 2881265.4351425944
[2025-11-27 13:52:28] 2025-11-27 18:51:55,825 | INFO     | intersect: -9021543662.65588
[2025-11-27 13:52:28] 2025-11-27 18:51:55,827 | INFO     | chi2: 0.5892603896687919
[2025-11-27 13:52:28] 2025-11-27 18:51:55,827 | INFO     | current memory leak: 5.12 B/s (using 1087 data points, chi2=0.59)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,828 | INFO     | could have reported an average CPU frequency of 2622 MHz (41 samples)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,828 | INFO     | ..............................
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . Timing measurements:
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . get job = 0 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . initial setup = 2 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . payload setup = 5 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . stage-in = 0 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,829 | INFO     | . payload execution = 68174 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,830 | INFO     | . stage-out = 4 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,830 | INFO     | . log creation = 0 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,830 | INFO     | ..............................
[2025-11-27 13:52:28] 2025-11-27 18:51:55,994 | INFO     | 
[2025-11-27 13:52:28] 2025-11-27 18:51:55,994 | INFO     | job summary report
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | --------------------------------------------------
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | PanDA job id: 6896990443
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | task id: 47556161
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | errors: (none)
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:52:28] 2025-11-27 18:51:55,995 | INFO     | pilot state: finished 
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | transexitcode: 0
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | exeerrorcode: 0
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | exeerrordiag: 
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | exitcode: 0
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | exitmsg: OK
[2025-11-27 13:52:28] 2025-11-27 18:51:55,996 | INFO     | cpuconsumptiontime: 529372 s
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | nevents: 1000
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | neventsw: 0
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | pid: 18146
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | pgrp: 18146
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | corecount: 8
[2025-11-27 13:52:28] 2025-11-27 18:51:55,997 | INFO     | event service: False
[2025-11-27 13:52:28] 2025-11-27 18:51:55,998 | INFO     | sizes: {0: 2284094, 1: 2284293, 4: 2284555, 12: 2284583, 68183: 2340449, 68188: 2349443, 68189: 2349627, 68193: 2349969}
[2025-11-27 13:52:28] 2025-11-27 18:51:55,998 | INFO     | --------------------------------------------------
[2025-11-27 13:52:28] 2025-11-27 18:51:55,998 | INFO     | 
[2025-11-27 13:52:28] 2025-11-27 18:51:55,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 13:52:28] 2025-11-27 18:51:56,021 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,021 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,021 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,022 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,022 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,022 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,022 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,022 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,023 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,024 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:52:28] 2025-11-27 18:51:56,025 | INFO     | job 6896990443 has completed (purged errors)
[2025-11-27 13:52:28] 2025-11-27 18:51:56,025 | INFO     | overall cleanup function is called
[2025-11-27 13:52:28] 2025-11-27 18:51:57,040 | INFO     | --- collectZombieJob: --- 10, [18146]
[2025-11-27 13:52:28] 2025-11-27 18:51:57,040 | INFO     | zombie collector waiting for pid 18146
[2025-11-27 13:52:28] 2025-11-27 18:51:57,040 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:52:28] 2025-11-27 18:51:57,040 | INFO     | collected zombie processes
[2025-11-27 13:52:28] 2025-11-27 18:51:57,040 | INFO     | will attempt to kill all subprocesses of pid=18146
[2025-11-27 13:52:28] 2025-11-27 18:51:57,193 | INFO     | process IDs to be killed: [18146] (in reverse order)
[2025-11-27 13:52:28] 2025-11-27 18:51:57,253 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:52:28] 2025-11-27 18:51:57,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:52:28] 2025-11-27 18:51:57,257 | INFO     | did not find any defunct processes belonging to 18146
[2025-11-27 13:52:28] 2025-11-27 18:51:57,259 | INFO     | did not find any defunct processes belonging to 18146
[2025-11-27 13:52:28] 2025-11-27 18:51:57,260 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:52:28] 2025-11-27 18:51:57,261 | INFO     | ready for new job
[2025-11-27 13:52:28] 2025-11-27 18:51:57,261 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:52:28] 2025-11-27 18:51:57,264 | INFO     | ***************************************
[2025-11-27 13:52:28] 2025-11-27 18:51:57,265 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:52:28] 2025-11-27 18:51:57,265 | INFO     | ***************************************
[2025-11-27 13:52:28] 2025-11-27 18:51:57,265 | INFO     | 
[2025-11-27 13:52:28] 2025-11-27 18:51:57,266 | INFO     | architecture information:
[2025-11-27 13:52:28] 2025-11-27 18:51:57,266 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:52:28] 2025-11-27 18:51:57,275 | INFO     | cat /etc/os-release:
[2025-11-27 13:52:28] NAME="CentOS Linux"
[2025-11-27 13:52:28] VERSION="7 (Core)"
[2025-11-27 13:52:28] ID="centos"
[2025-11-27 13:52:28] ID_LIKE="rhel fedora"
[2025-11-27 13:52:28] VERSION_ID="7"
[2025-11-27 13:52:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:52:28] ANSI_COLOR="0;31"
[2025-11-27 13:52:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:52:28] HOME_URL="https://www.centos.org/"
[2025-11-27 13:52:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:52:28] 
[2025-11-27 13:52:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:52:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:52:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:52:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:52:28] 
[2025-11-27 13:52:28] 2025-11-27 18:51:57,276 | INFO     | ***************************************
[2025-11-27 13:52:28] 2025-11-27 18:51:57,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 13:52:28] 2025-11-27 18:51:57,911 | INFO     | sufficient remaining disk space (24836571136 B)
[2025-11-27 13:52:28] 2025-11-27 18:51:57,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:52:28] 2025-11-27 18:51:57,912 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:52:28] 2025-11-27 18:51:57,912 | INFO     | update_server=False
[2025-11-27 13:52:28] 2025-11-27 18:51:57,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:52:28] 2025-11-27 18:51:57,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:52:28] 2025-11-27 18:51:57,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:52:28] 2025-11-27 18:51:57,913 | INFO     | aborting loop
[2025-11-27 13:52:28] 2025-11-27 18:51:58,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:52:28] 2025-11-27 18:51:58,336 | INFO     | all data control threads have been joined
[2025-11-27 13:52:28] 2025-11-27 18:51:58,365 | INFO     | all payload control threads have been joined
[2025-11-27 13:52:28] 2025-11-27 18:51:58,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:52:28] 2025-11-27 18:51:58,918 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:58,918 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:58,919 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:58,953 | INFO     | all job control threads have been joined
[2025-11-27 13:52:28] 2025-11-27 18:51:59,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,297 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,341 | INFO     | [data] control thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,371 | INFO     | [payload] control thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,536 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,764 | INFO     | [job] validate thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,850 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,895 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:51:59,959 | INFO     | [job] control thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:52:00,032 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:52:00,221 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:52:28] 2025-11-27 18:52:00,308 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:52:00,601 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:52:02,303 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:52:28] 2025-11-27 18:52:04,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140191266211648)>', '<ExcThread(monitor, started 140190618220288)>']
[2025-11-27 13:52:28] 2025-11-27 18:52:09,094 | INFO     | all workflow threads have been joined
[2025-11-27 13:52:28] 2025-11-27 18:52:09,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:52:28] 2025-11-27 18:52:09,094 | INFO     | traces error code: 0
[2025-11-27 13:52:28] 2025-11-27 18:52:09,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:52:28] 2025-11-27 18:52:28,548 | INFO     | PID=11771 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 13:52:28] 2025-11-27 18:52:28,549 | INFO     | .. there are 3 such processes running
[2025-11-27 13:52:28] 2025-11-27 18:52:28,549 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:52:28] 2025-11-27 18:52:28,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:52:28] 2025-11-27 18:52:28,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:52:28] 2025-11-27 18:52:28,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:52:28] 2025-11-27 18:52:28,550 | INFO     | [monitor] control thread has ended
[2025-11-27 13:52:28] 2025-11-27 18:52:28,669 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:52:28] 2025-11-27 18:52:28,672 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:52:28] 2025-11-27 18:52:28,675 [wrapper] pilotpid: 11771
[2025-11-27 13:52:28] 2025-11-27 18:52:28,677 [wrapper] Pilot exit status: 0
[2025-11-27 13:52:28] 2025-11-27 18:52:28,685 [wrapper] pandaids: 6896990443
[2025-11-27 13:52:28] 2025-11-27 18:52:28,714 [wrapper] cleanup supervisor_pilot 14484 11772
[2025-11-27 13:52:28] 2025-11-27 18:52:28,716 [wrapper] Test setup, not cleaning
[2025-11-27 13:52:28] 2025-11-27 18:52:28,719 [wrapper] apfmon messages muted
[2025-11-27 13:52:28] 2025-11-27 18:52:28,721 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:52:28] 2025-11-27 18:52:28,723 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:52:28]  *** Error codes and diagnostics ***
[2025-11-27 13:52:28]     "exeErrorCode": 0,
[2025-11-27 13:52:28]     "exeErrorDiag": "",
[2025-11-27 13:52:28]     "pilotErrorCode": 0,
[2025-11-27 13:52:28]     "pilotErrorDiag": "",
[2025-11-27 13:52:28]  *** Listing of results directory ***
[2025-11-27 13:52:28] total 1320316
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 13:52:28] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:52:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:54 run_atlas
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:54 job.xml
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas 410999326 Nov 26 18:54 EVNT.47483658._002175.pool.root.1
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:54 start_atlas.sh
[2025-11-27 13:52:28] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:54 shared
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 18:54 input.tar.gz
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:54 boinc_lockfile
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 18:54 pandaJob.out
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas        57 Nov 26 18:54 setup.sh.local
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas    991538 Nov 26 18:55 agis_schedconf.cvmfs.json
[2025-11-27 13:52:28] drwx------ 5 boincer umatlas      4096 Nov 26 18:55 pilot3
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas       532 Nov 27 13:32 boinc_task_state.xml
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 13:48 init_data.xml
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas 913614065 Nov 27 13:51 HITS.47556161._001588.pool.root.1
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas      1068 Nov 27 13:51 memory_monitor_summary.json
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas   1516240 Nov 27 13:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas   2289674 Nov 27 13:51 log.47556161._001588.job.log.tgz.1
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas      8666 Nov 27 13:51 heartbeat.json
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 13:52 boinc_mmap_file
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas        29 Nov 27 13:52 wrapper_checkpoint.txt
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas        95 Nov 27 13:52 pilot_heartbeat.json
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas       820 Nov 27 13:52 pilotlog.txt
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas   9442410 Nov 27 13:52 log.47556161._001588.job.log.1
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas       353 Nov 27 13:52 output.list
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas       620 Nov 27 13:52 runtime_log
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas  11755520 Nov 27 13:52 result.tar.gz
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 13:52 runtime_log.err
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas       668 Nov 27 13:52 7UQMDmTWBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSTMKDmuYY6On.diag
[2025-11-27 13:52:28] -rw-r--r-- 1 boincer umatlas     21292 Nov 27 13:52 stderr.txt
[2025-11-27 13:52:28] HITS file was successfully produced:
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas 913614065 Nov 27 13:51 shared/HITS.pool.root.1
[2025-11-27 13:52:28]  *** Contents of shared directory: ***
[2025-11-27 13:52:28] total 1305656
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas 410999326 Nov 26 18:54 ATLAS.root_0
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:54 start_atlas.sh
[2025-11-27 13:52:28] -rw-r--r-- 2 boincer umatlas    590112 Nov 26 18:54 input.tar.gz
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas 913614065 Nov 27 13:51 HITS.pool.root.1
[2025-11-27 13:52:28] -rw------- 1 boincer umatlas  11755520 Nov 27 13:52 result.tar.gz
13:52:30 (7822): run_atlas exited; CPU time 528875.910508
13:52:30 (7822): called boinc_finish(0)

</stderr_txt>
]]>

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