Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:39 (2312917): wrapper (7.7.26015): starting
22:10:39 (2312917): wrapper: running run_atlas (--nthreads 3)
[2025-12-01 22:10:39] Arguments: --nthreads 3
[2025-12-01 22:10:39] Threads: 3
[2025-12-01 22:10:39] Checking for CVMFS
[2025-12-01 22:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 22:10:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 22:10:39] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 22:10:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 22:10:39] 2.9.2.0 193215 81197 106688 153531 0 81 12937170 36864000 12 130560 1 26967011 99.968 2863336 1099 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-01 22:10:39] CVMFS is ok
[2025-12-01 22:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 22:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-01 22:10:39] Further information can be found at the LHC@home message board.
[2025-12-01 22:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 22:10:39] Checking for apptainer binary...
[2025-12-01 22:10:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 22:10:39] Running /usr/bin/apptainer --version
[2025-12-01 22:10:39] apptainer version 1.4.1-1.1
[2025-12-01 22:10:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 22:10:39] thA383
[2025-12-01 22:10:39] apptainer works
[2025-12-01 22:10:39] Set ATHENA_PROC_NUMBER=3
[2025-12-01 22:10:39] Set ATHENA_CORE_NUMBER=3
[2025-12-01 22:10:39] Starting ATLAS job with PandaID=6898000250
[2025-12-01 22:10:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 06:26:24]  *** The last 200 lines of the pilot log: ***
[2025-12-02 06:26:24] 
[2025-12-02 06:26:24] 2025-12-02 05:25:50,186 | INFO     | ***************************************
[2025-12-02 06:26:24] 2025-12-02 05:25:50,690 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | INFO     | sufficient remaining disk space (241243783168 B)
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | INFO     | update_server=False
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 06:26:24] 2025-12-02 05:25:50,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 06:26:24] 2025-12-02 05:25:51,023 | INFO     | all payload control threads have been joined
[2025-12-02 06:26:24] 2025-12-02 05:25:51,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 06:26:24] 2025-12-02 05:25:51,042 | INFO     | aborting loop
[2025-12-02 06:26:24] 2025-12-02 05:25:51,707 | INFO     | [job] queue monitor thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:51,707 | INFO     | [job] retrieve thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:51,800 | INFO     | all data control threads have been joined
[2025-12-02 06:26:24] 2025-12-02 05:25:51,873 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,029 | INFO     | [payload] control thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,048 | INFO     | [job] job monitor thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,130 | INFO     | all job control threads have been joined
[2025-12-02 06:26:24] 2025-12-02 05:25:52,147 | INFO     | [data] copytool_in thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,414 | INFO     | [job] validate thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,418 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,538 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,607 | INFO     | [payload] validate_post thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,709 | INFO     | [data] copytool_out thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,806 | INFO     | [data] control thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:52,828 | INFO     | [payload] failed_post thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:53,136 | INFO     | [job] control thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:25:54,710 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:26:01,372 | INFO     | job.realtimelogging is not enabled
[2025-12-02 06:26:24] 2025-12-02 05:26:02,378 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 06:26:24] 2025-12-02 05:26:18,901 | INFO     | [monitor] cgroup control has ended
[2025-12-02 06:26:24] 2025-12-02 05:26:18,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292017571648)>', '<ExcThread(monitor, started 140291524773632)>']
[2025-12-02 06:26:24] 2025-12-02 05:26:20,211 | INFO     | PID=2316639 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 06:26:24] 2025-12-02 05:26:20,212 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 06:26:24] 2025-12-02 05:26:20,212 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 06:26:24] 2025-12-02 05:26:20,212 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 06:26:24] 2025-12-02 05:26:20,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 06:26:24] 2025-12-02 05:26:20,212 | INFO     | [monitor] control thread has ended
[2025-12-02 06:26:24] 2025-12-02 05:26:23,983 | INFO     | all workflow threads have been joined
[2025-12-02 06:26:24] 2025-12-02 05:26:23,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 06:26:24] 2025-12-02 05:26:23,984 | INFO     | traces error code: 0
[2025-12-02 06:26:24] 2025-12-02 05:26:23,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 06:26:24] 2025-12-02 05:26:24,034 [wrapper] ==== pilot stdout END ====
[2025-12-02 06:26:24] 2025-12-02 05:26:24,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 06:26:24] 2025-12-02 05:26:24,039 [wrapper] pilotpid: 2316639
[2025-12-02 06:26:24] 2025-12-02 05:26:24,041 [wrapper] Pilot exit status: 0
[2025-12-02 06:26:24] 2025-12-02 05:26:24,050 [wrapper] pandaids: 6898000250
[2025-12-02 06:26:24] 2025-12-02 05:26:24,066 [wrapper] cleanup supervisor_pilot 2375608 2316640
[2025-12-02 06:26:24] 2025-12-02 05:26:24,068 [wrapper] Test setup, not cleaning
[2025-12-02 06:26:24] 2025-12-02 05:26:24,070 [wrapper] apfmon messages muted
[2025-12-02 06:26:24] 2025-12-02 05:26:24,072 [wrapper] ==== wrapper stdout END ====
[2025-12-02 06:26:24] 2025-12-02 05:26:24,075 [wrapper] ==== wrapper stderr END ====
[2025-12-02 06:26:24]  *** Error codes and diagnostics ***
[2025-12-02 06:26:24]     "exeErrorCode": 0,
[2025-12-02 06:26:24]     "exeErrorDiag": "",
[2025-12-02 06:26:24]     "pilotErrorCode": 0,
[2025-12-02 06:26:24]     "pilotErrorDiag": "",
[2025-12-02 06:26:24]  *** Listing of results directory ***
[2025-12-02 06:26:24] total 1328816
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc    576529 Nov 26 03:38 pilot3.tar.gz
[2025-12-02 06:26:24] -rwx------ 1 boinc boinc     36292 Nov 26 03:41 runpilot2-wrapper.sh
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      5112 Nov 26 03:41 queuedata.json
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc       100 Dec  1 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 06:26:24] -rwxr-xr-x 1 boinc boinc      7986 Dec  1 22:10 run_atlas
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc       105 Dec  1 22:10 job.xml
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc 411938696 Dec  1 22:10 EVNT.47483658._002389.pool.root.1
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc    590096 Dec  1 22:10 input.tar.gz
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:10 start_atlas.sh
[2025-12-02 06:26:24] drwxrwx--x 2 boinc boinc      4096 Dec  1 22:10 shared
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc         0 Dec  1 22:10 boinc_setup_complete
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      6440 Dec  1 22:10 init_data.xml
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc         0 Dec  1 22:10 boinc_lockfile
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      2782 Dec  1 22:10 pandaJob.out
[2025-12-02 06:26:24] -rw------- 1 boinc boinc    992004 Dec  1 22:10 agis_schedconf.cvmfs.json
[2025-12-02 06:26:24] drwx------ 5 boinc boinc      4096 Dec  1 22:10 pilot3
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc       532 Dec  2 06:22 boinc_task_state.xml
[2025-12-02 06:26:24] -rw------- 1 boinc boinc 934145095 Dec  2 06:25 HITS.47556161._003711.pool.root.1
[2025-12-02 06:26:24] -rw------- 1 boinc boinc      1025 Dec  2 06:25 memory_monitor_summary.json
[2025-12-02 06:26:24] -rw------- 1 boinc boinc   1516240 Dec  2 06:25 agis_ddmendpoints.agis.ALL.json
[2025-12-02 06:26:24] -rw------- 1 boinc boinc   1180345 Dec  2 06:25 log.47556161._003711.job.log.tgz.1
[2025-12-02 06:26:24] -rw------- 1 boinc boinc      8562 Dec  2 06:25 heartbeat.json
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      8192 Dec  2 06:26 boinc_mmap_file
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc        28 Dec  2 06:26 wrapper_checkpoint.txt
[2025-12-02 06:26:24] -rw------- 1 boinc boinc        95 Dec  2 06:26 pilot_heartbeat.json
[2025-12-02 06:26:24] -rw------- 1 boinc boinc      4824 Dec  2 06:26 pilotlog.txt
[2025-12-02 06:26:24] -rw------- 1 boinc boinc   4181060 Dec  2 06:26 log.47556161._003711.job.log.1
[2025-12-02 06:26:24] -rw------- 1 boinc boinc       353 Dec  2 06:26 output.list
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc       620 Dec  2 06:26 runtime_log
[2025-12-02 06:26:24] -rw------- 1 boinc boinc   5386240 Dec  2 06:26 result.tar.gz
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      8898 Dec  2 06:26 runtime_log.err
[2025-12-02 06:26:24] -rw------- 1 boinc boinc       665 Dec  2 06:26 AlzKDmreKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSnJKDmpcgMHm.diag
[2025-12-02 06:26:24] -rw-r--r-- 1 boinc boinc      8083 Dec  2 06:26 stderr.txt
[2025-12-02 06:26:24] HITS file was successfully produced:
[2025-12-02 06:26:24] -rw------- 1 boinc boinc 934145095 Dec  2 06:25 shared/HITS.pool.root.1
[2025-12-02 06:26:24]  *** Contents of shared directory: ***
[2025-12-02 06:26:24] total 1320396
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc 411938696 Dec  1 22:10 ATLAS.root_0
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc    590096 Dec  1 22:10 input.tar.gz
[2025-12-02 06:26:24] -rw-r--r-- 2 boinc boinc     15847 Dec  1 22:10 start_atlas.sh
[2025-12-02 06:26:24] -rw------- 1 boinc boinc 934145095 Dec  2 06:25 HITS.pool.root.1
[2025-12-02 06:26:24] -rw------- 1 boinc boinc   5386240 Dec  2 06:26 result.tar.gz
06:26:26 (2312917): run_atlas exited; CPU time 87805.688822
06:26:26 (2312917): called boinc_finish(0)

</stderr_txt>
]]>

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