Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:15:36 (6925): wrapper (7.7.26015): starting
19:15:36 (6925): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:15:36] Arguments: --nthreads 8
[2025-11-26 19:15:36] Threads: 8
[2025-11-26 19:15:36] Checking for CVMFS
[2025-11-26 19:15:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:15:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:15:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:15:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:15:36] 2.11.2.0 28705 118550 143604 153340 0 82 10623330 18432001 1717 130560 0 86930235 99.975 5045000 32090 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:15:36] CVMFS is ok
[2025-11-26 19:15:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:15:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:15:36] Further information can be found at the LHC@home message board.
[2025-11-26 19:15:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:15:36] Checking for apptainer binary...
[2025-11-26 19:15:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:15:36] Running /usr/bin/apptainer --version
[2025-11-26 19:15:36] apptainer version 1.3.2-1.el7
[2025-11-26 19:15:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:15:37] c-206-27.aglt2.org
[2025-11-26 19:15:37] apptainer works
[2025-11-26 19:15:37] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:15:37] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:15:37] Starting ATLAS job with PandaID=6897372672
[2025-11-26 19:15:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:27:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:27:47] 2025-11-27 19:26:45,504 | INFO     | monitor loop #4935: job 0:6897372672 is in state 'finished'
[2025-11-27 14:27:47] 2025-11-27 19:26:45,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,377 | INFO     | time since job start (69058s) is within the limit (172800.0s)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,716 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 14:27:47] 2025-11-27 19:26:46,722 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2533.375
[2025-11-27 14:27:47] 2025-11-27 19:26:46,727 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897372672/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,728 | INFO     | extracted standard info from prmon json
[2025-11-27 14:27:47] 2025-11-27 19:26:46,728 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:27:47] 2025-11-27 19:26:46,728 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:27:47] 2025-11-27 19:26:46,758 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:27:47] 2025-11-27 19:26:46,760 | INFO     | sum of square deviations: 449798828046.92004
[2025-11-27 14:27:47] 2025-11-27 19:26:46,806 | INFO     | sum of deviations: 2043540105590.464
[2025-11-27 14:27:47] 2025-11-27 19:26:46,806 | INFO     | mean x: 1764237068.09894
[2025-11-27 14:27:47] 2025-11-27 19:26:46,807 | INFO     | mean y: 2874957.1386925797
[2025-11-27 14:27:47] 2025-11-27 19:26:46,807 | INFO     | intersect: -8012462077.16198
[2025-11-27 14:27:47] 2025-11-27 19:26:46,808 | INFO     | chi2: 5.310070896788719
[2025-11-27 14:27:47] 2025-11-27 19:26:46,810 | INFO     | sum of square deviations: 443865100320.1173
[2025-11-27 14:27:47] 2025-11-27 19:26:46,855 | INFO     | sum of deviations: 2395210385555.6895
[2025-11-27 14:27:47] 2025-11-27 19:26:46,855 | INFO     | mean x: 1764236915.601597
[2025-11-27 14:27:47] 2025-11-27 19:26:46,856 | INFO     | mean y: 2883990.5093167704
[2025-11-27 14:27:47] 2025-11-27 19:26:46,856 | INFO     | intersect: -9517392732.715998
[2025-11-27 14:27:47] 2025-11-27 19:26:46,857 | INFO     | chi2: 2.496401399889491
[2025-11-27 14:27:47] 2025-11-27 19:26:46,858 | INFO     | current chi2=2.496401399889491 (change=52.98741865387905 %)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,859 | INFO     | sum of square deviations: 437983792180.8
[2025-11-27 14:27:47] 2025-11-27 19:26:46,903 | INFO     | sum of deviations: 2516212348323.176
[2025-11-27 14:27:47] 2025-11-27 19:26:46,903 | INFO     | mean x: 1764236763.104278
[2025-11-27 14:27:47] 2025-11-27 19:26:46,903 | INFO     | mean y: 2887124.7762923352
[2025-11-27 14:27:47] 2025-11-27 19:26:46,904 | INFO     | intersect: -10132634800.78435
[2025-11-27 14:27:47] 2025-11-27 19:26:46,905 | INFO     | chi2: 2.025719204204084
[2025-11-27 14:27:47] 2025-11-27 19:26:46,905 | INFO     | current chi2=2.025719204204084 (change=18.854427645579868 %)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,906 | INFO     | right removable region: 1121
[2025-11-27 14:27:47] 2025-11-27 19:26:46,907 | INFO     | sum of square deviations: 443864686740.1178
[2025-11-27 14:27:47] 2025-11-27 19:26:46,954 | INFO     | sum of deviations: 1781862147143.9937
[2025-11-27 14:27:47] 2025-11-27 19:26:46,954 | INFO     | mean x: 1764237220.601597
[2025-11-27 14:27:47] 2025-11-27 19:26:46,954 | INFO     | mean y: 2881672.445430346
[2025-11-27 14:27:47] 2025-11-27 19:26:46,954 | INFO     | intersect: -7079518923.691886
[2025-11-27 14:27:47] 2025-11-27 19:26:46,956 | INFO     | chi2: 3.535925795704726
[2025-11-27 14:27:47] 2025-11-27 19:26:46,956 | INFO     | current chi2=3.535925795704726 (change=33.41094941231223 %)
[2025-11-27 14:27:47] 2025-11-27 19:26:46,958 | INFO     | sum of square deviations: 437982965020.7999
[2025-11-27 14:27:47] 2025-11-27 19:26:47,002 | INFO     | sum of deviations: 1711154806020.3928
[2025-11-27 14:27:47] 2025-11-27 19:26:47,002 | INFO     | mean x: 1764237373.104278
[2025-11-27 14:27:47] 2025-11-27 19:26:47,002 | INFO     | mean y: 2883505.210338681
[2025-11-27 14:27:47] 2025-11-27 19:26:47,002 | INFO     | intersect: -6889812104.092208
[2025-11-27 14:27:47] 2025-11-27 19:26:47,004 | INFO     | chi2: 3.4893922820400882
[2025-11-27 14:27:47] 2025-11-27 19:26:47,004 | INFO     | current chi2=3.4893922820400882 (change=1.31602065069251 %)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,004 | INFO     | left removable region: 20
[2025-11-27 14:27:47] 2025-11-27 19:26:47,006 | INFO     | sum of square deviations: 413847817100.485
[2025-11-27 14:27:47] 2025-11-27 19:26:47,048 | INFO     | sum of deviations: 2078372407342.5566
[2025-11-27 14:27:47] 2025-11-27 19:26:47,048 | INFO     | mean x: 1764237342.6158037
[2025-11-27 14:27:47] 2025-11-27 19:26:47,049 | INFO     | mean y: 2899073.1289736605
[2025-11-27 14:27:47] 2025-11-27 19:26:47,049 | INFO     | intersect: -8857223081.401405
[2025-11-27 14:27:47] 2025-11-27 19:26:47,050 | INFO     | chi2: 0.1429798600366683
[2025-11-27 14:27:47] 2025-11-27 19:26:47,051 | INFO     | current memory leak: 5.02 B/s (using 1101 data points, chi2=0.14)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,052 | INFO     | could have reported an average CPU frequency of 2614 MHz (41 samples)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,052 | INFO     | ..............................
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . Timing measurements:
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . get job = 0 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . initial setup = 2 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . payload setup = 4 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . stage-in = 0 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,053 | INFO     | . payload execution = 69024 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,054 | INFO     | . stage-out = 4 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,054 | INFO     | . log creation = 0 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,054 | INFO     | ..............................
[2025-11-27 14:27:47] 2025-11-27 19:26:47,655 | INFO     | 
[2025-11-27 14:27:47] 2025-11-27 19:26:47,655 | INFO     | job summary report
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | --------------------------------------------------
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | PanDA job id: 6897372672
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | task id: 47556161
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | errors: (none)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:27:47] 2025-11-27 19:26:47,656 | INFO     | pilot state: finished 
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | transexitcode: 0
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | exeerrorcode: 0
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | exeerrordiag: 
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | exitcode: 0
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | exitmsg: OK
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | cpuconsumptiontime: 539911 s
[2025-11-27 14:27:47] 2025-11-27 19:26:47,657 | INFO     | nevents: 1000
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | neventsw: 0
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | pid: 17151
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | pgrp: 17151
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | corecount: 8
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | event service: False
[2025-11-27 14:27:47] 2025-11-27 19:26:47,658 | INFO     | sizes: {0: 2283437, 1: 2284293, 4: 2284555, 12: 2284583, 69033: 2340702, 69034: 2340701, 69038: 2349879, 69040: 2349935, 69044: 2350277}
[2025-11-27 14:27:47] 2025-11-27 19:26:47,659 | INFO     | --------------------------------------------------
[2025-11-27 14:27:47] 2025-11-27 19:26:47,659 | INFO     | 
[2025-11-27 14:27:47] 2025-11-27 19:26:47,659 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 14:27:47] 2025-11-27 19:26:47,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,681 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,681 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:27:47] 2025-11-27 19:26:47,681 | INFO     | job 6897372672 has completed (purged errors)
[2025-11-27 14:27:47] 2025-11-27 19:26:47,681 | INFO     | overall cleanup function is called
[2025-11-27 14:27:47] 2025-11-27 19:26:48,696 | INFO     | --- collectZombieJob: --- 10, [17151]
[2025-11-27 14:27:47] 2025-11-27 19:26:48,696 | INFO     | zombie collector waiting for pid 17151
[2025-11-27 14:27:47] 2025-11-27 19:26:48,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:27:47] 2025-11-27 19:26:48,697 | INFO     | collected zombie processes
[2025-11-27 14:27:47] 2025-11-27 19:26:48,697 | INFO     | will attempt to kill all subprocesses of pid=17151
[2025-11-27 14:27:47] 2025-11-27 19:26:48,871 | INFO     | process IDs to be killed: [17151] (in reverse order)
[2025-11-27 14:27:47] 2025-11-27 19:26:48,934 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:27:47] 2025-11-27 19:26:48,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:27:47] 2025-11-27 19:26:48,940 | INFO     | did not find any defunct processes belonging to 17151
[2025-11-27 14:27:47] 2025-11-27 19:26:48,945 | INFO     | did not find any defunct processes belonging to 17151
[2025-11-27 14:27:47] 2025-11-27 19:26:48,946 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:27:47] 2025-11-27 19:26:48,947 | INFO     | ready for new job
[2025-11-27 14:27:47] 2025-11-27 19:26:48,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:27:47] 2025-11-27 19:26:48,952 | INFO     | ***************************************
[2025-11-27 14:27:47] 2025-11-27 19:26:48,952 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:27:47] 2025-11-27 19:26:48,952 | INFO     | ***************************************
[2025-11-27 14:27:47] 2025-11-27 19:26:48,952 | INFO     | 
[2025-11-27 14:27:47] 2025-11-27 19:26:48,954 | INFO     | architecture information:
[2025-11-27 14:27:47] 2025-11-27 19:26:48,954 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:27:47] 2025-11-27 19:26:48,967 | INFO     | cat /etc/os-release:
[2025-11-27 14:27:47] NAME="CentOS Linux"
[2025-11-27 14:27:47] VERSION="7 (Core)"
[2025-11-27 14:27:47] ID="centos"
[2025-11-27 14:27:47] ID_LIKE="rhel fedora"
[2025-11-27 14:27:47] VERSION_ID="7"
[2025-11-27 14:27:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:27:47] ANSI_COLOR="0;31"
[2025-11-27 14:27:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:27:47] HOME_URL="https://www.centos.org/"
[2025-11-27 14:27:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:27:47] 
[2025-11-27 14:27:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:27:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:27:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:27:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:27:47] 
[2025-11-27 14:27:47] 2025-11-27 19:26:48,968 | INFO     | ***************************************
[2025-11-27 14:27:47] 2025-11-27 19:26:49,470 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 14:27:47] 2025-11-27 19:26:49,482 | INFO     | sufficient remaining disk space (24877465600 B)
[2025-11-27 14:27:47] 2025-11-27 19:26:49,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:27:47] 2025-11-27 19:26:49,483 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:27:47] 2025-11-27 19:26:49,483 | INFO     | update_server=False
[2025-11-27 14:27:47] 2025-11-27 19:26:49,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:27:47] 2025-11-27 19:26:49,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:27:47] 2025-11-27 19:26:49,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:27:47] 2025-11-27 19:26:49,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:27:47] 2025-11-27 19:26:49,485 | INFO     | aborting loop
[2025-11-27 14:27:47] 2025-11-27 19:26:50,095 | INFO     | all data control threads have been joined
[2025-11-27 14:27:47] 2025-11-27 19:26:50,449 | INFO     | all job control threads have been joined
[2025-11-27 14:27:47] 2025-11-27 19:26:50,488 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:50,490 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:50,781 | INFO     | [job] validate thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:50,950 | INFO     | all payload control threads have been joined
[2025-11-27 14:27:47] 2025-11-27 19:26:50,982 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,101 | INFO     | [data] control thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,454 | INFO     | [job] control thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,489 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,707 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,708 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,737 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,944 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:51,955 | INFO     | [payload] control thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:52,022 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:52,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:27:47] 2025-11-27 19:26:53,230 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:26:53,492 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:27:47] 2025-11-27 19:27:19,654 | INFO     | PID=10697 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 14:27:47] 2025-11-27 19:27:19,654 | INFO     | .. there are 3 such processes running
[2025-11-27 14:27:47] 2025-11-27 19:27:19,654 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:27:47] 2025-11-27 19:27:19,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:27:47] 2025-11-27 19:27:19,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:27:47] 2025-11-27 19:27:42,600 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:27:47] 2025-11-27 19:27:42,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185854232384)>', '<ExcThread(monitor, started 140184913966848)>']
[2025-11-27 14:27:47] 2025-11-27 19:27:42,768 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:27:47] 2025-11-27 19:27:42,768 | INFO     | [monitor] control thread has ended
[2025-11-27 14:27:47] 2025-11-27 19:27:47,652 | INFO     | all workflow threads have been joined
[2025-11-27 14:27:47] 2025-11-27 19:27:47,652 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:27:47] 2025-11-27 19:27:47,653 | INFO     | traces error code: 0
[2025-11-27 14:27:47] 2025-11-27 19:27:47,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:27:47] 2025-11-27 19:27:47,776 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:27:47] 2025-11-27 19:27:47,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:27:47] 2025-11-27 19:27:47,781 [wrapper] pilotpid: 10697
[2025-11-27 14:27:47] 2025-11-27 19:27:47,783 [wrapper] Pilot exit status: 0
[2025-11-27 14:27:47] 2025-11-27 19:27:47,793 [wrapper] pandaids: 6897372672
[2025-11-27 14:27:47] 2025-11-27 19:27:47,838 [wrapper] cleanup supervisor_pilot 17196 10698
[2025-11-27 14:27:47] 2025-11-27 19:27:47,840 [wrapper] Test setup, not cleaning
[2025-11-27 14:27:47] 2025-11-27 19:27:47,842 [wrapper] apfmon messages muted
[2025-11-27 14:27:47] 2025-11-27 19:27:47,844 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:27:47] 2025-11-27 19:27:47,846 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:27:47]  *** Error codes and diagnostics ***
[2025-11-27 14:27:47]     "exeErrorCode": 0,
[2025-11-27 14:27:47]     "exeErrorDiag": "",
[2025-11-27 14:27:47]     "pilotErrorCode": 0,
[2025-11-27 14:27:47]     "pilotErrorDiag": "",
[2025-11-27 14:27:47]  *** Listing of results directory ***
[2025-11-27 14:27:47] total 1326376
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 14:27:47] -rwx------ 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas       100 Nov 26 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:27:47] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 19:15 run_atlas
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas       105 Nov 26 19:15 job.xml
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas 410037199 Nov 26 19:15 EVNT.47483658._002201.pool.root.1
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:15 start_atlas.sh
[2025-11-27 14:27:47] drwxrwx--x 2 boincer umatlas      4096 Nov 26 19:15 shared
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 19:15 input.tar.gz
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas         0 Nov 26 19:15 boinc_lockfile
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 19:15 pandaJob.out
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas        57 Nov 26 19:15 setup.sh.local
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas    991538 Nov 26 19:15 agis_schedconf.cvmfs.json
[2025-11-27 14:27:47] drwx------ 5 boincer umatlas      4096 Nov 26 19:15 pilot3
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas       533 Nov 27 14:15 boinc_task_state.xml
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas      5954 Nov 27 14:19 init_data.xml
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas 920546660 Nov 27 14:25 HITS.47556161._001849.pool.root.1
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas        95 Nov 27 14:26 pilot_heartbeat.json
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas      1068 Nov 27 14:26 memory_monitor_summary.json
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas   1516240 Nov 27 14:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas   2292757 Nov 27 14:26 log.47556161._001849.job.log.tgz.1
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas      8663 Nov 27 14:26 heartbeat.json
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas        29 Nov 27 14:27 wrapper_checkpoint.txt
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 14:27 boinc_mmap_file
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas      4821 Nov 27 14:27 pilotlog.txt
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas   9562154 Nov 27 14:27 log.47556161._001849.job.log.1
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas       353 Nov 27 14:27 output.list
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas       620 Nov 27 14:27 runtime_log
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas  11878400 Nov 27 14:27 result.tar.gz
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 14:27 runtime_log.err
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas       668 Nov 27 14:27 mNTNDm8UBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7PMKDmQuVhRm.diag
[2025-11-27 14:27:47] -rw-r--r-- 1 boincer umatlas     20065 Nov 27 14:27 stderr.txt
[2025-11-27 14:27:47] HITS file was successfully produced:
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas 920546660 Nov 27 14:25 shared/HITS.pool.root.1
[2025-11-27 14:27:47]  *** Contents of shared directory: ***
[2025-11-27 14:27:47] total 1311600
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas 410037199 Nov 26 19:15 ATLAS.root_0
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 19:15 start_atlas.sh
[2025-11-27 14:27:47] -rw-r--r-- 2 boincer umatlas    590102 Nov 26 19:15 input.tar.gz
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas 920546660 Nov 27 14:25 HITS.pool.root.1
[2025-11-27 14:27:47] -rw------- 1 boincer umatlas  11878400 Nov 27 14:27 result.tar.gz
14:27:49 (6925): run_atlas exited; CPU time 539478.401455
14:27:49 (6925): called boinc_finish(0)

</stderr_txt>
]]>

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