Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:16:31 (2361566): wrapper (7.7.26015): starting
19:16:31 (2361566): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:16:31] Arguments: --nthreads 8
[2025-11-26 19:16:31] Threads: 8
[2025-11-26 19:16:31] Checking for CVMFS
[2025-11-26 19:16:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:16:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:16:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:16:32] 2.13.3.0 12537 30756 359768 153341 1 181 30177223 40960001 35830 16776704 43 183820041 99.716 137753235 36947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:16:32] CVMFS is ok
[2025-11-26 19:16:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:16:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:16:32] Further information can be found at the LHC@home message board.
[2025-11-26 19:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:16:32] Checking for apptainer binary...
[2025-11-26 19:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:16:32] Running /usr/bin/apptainer --version
[2025-11-26 19:16:32] apptainer version 1.4.4-1.el9
[2025-11-26 19:16:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:16:32] c7-11-14.aglt2.org
[2025-11-26 19:16:32] apptainer works
[2025-11-26 19:16:33] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:16:33] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:16:33] Starting ATLAS job with PandaID=6896766812
[2025-11-26 19:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:08:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:08:24] 2025-11-27 12:07:36,121 | INFO     | sum of deviations: 611541270435.1006
[2025-11-27 07:08:24] 2025-11-27 12:07:36,121 | INFO     | mean x: 1764223950.2464182
[2025-11-27 07:08:24] 2025-11-27 12:07:36,121 | INFO     | mean y: 2887802.0401146132
[2025-11-27 07:08:24] 2025-11-27 12:07:36,121 | INFO     | intersect: -10227446585.058033
[2025-11-27 07:08:24] 2025-11-27 12:07:36,122 | INFO     | chi2: 11.772392068572856
[2025-11-27 07:08:24] 2025-11-27 12:07:36,123 | INFO     | sum of square deviations: 103210918404.75601
[2025-11-27 07:08:24] 2025-11-27 12:07:36,140 | INFO     | sum of deviations: 867389401891.5754
[2025-11-27 07:08:24] 2025-11-27 12:07:36,141 | INFO     | mean x: 1764223797.7590187
[2025-11-27 07:08:24] 2025-11-27 12:07:36,141 | INFO     | mean y: 2905136.787878788
[2025-11-27 07:08:24] 2025-11-27 12:07:36,141 | INFO     | intersect: -14823714453.398458
[2025-11-27 07:08:24] 2025-11-27 12:07:36,141 | INFO     | chi2: 7.909645793634647
[2025-11-27 07:08:24] 2025-11-27 12:07:36,142 | INFO     | current chi2=7.909645793634647 (change=32.811906470988625 %)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,142 | INFO     | sum of square deviations: 100993611394.1732
[2025-11-27 07:08:24] 2025-11-27 12:07:36,151 | INFO     | sum of deviations: 1114192798296.4321
[2025-11-27 07:08:24] 2025-11-27 12:07:36,152 | INFO     | mean x: 1764223645.2718024
[2025-11-27 07:08:24] 2025-11-27 12:07:36,152 | INFO     | mean y: 2922111.82122093
[2025-11-27 07:08:24] 2025-11-27 12:07:36,152 | INFO     | intersect: -19460539517.193577
[2025-11-27 07:08:24] 2025-11-27 12:07:36,152 | INFO     | chi2: 4.433226740328719
[2025-11-27 07:08:24] 2025-11-27 12:07:36,152 | INFO     | current chi2=4.433226740328719 (change=43.95164011141441 %)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,153 | INFO     | sum of square deviations: 98808221174.49474
[2025-11-27 07:08:24] 2025-11-27 12:07:36,170 | INFO     | sum of deviations: 1232326882529.7368
[2025-11-27 07:08:24] 2025-11-27 12:07:36,170 | INFO     | mean x: 1764223492.7818449
[2025-11-27 07:08:24] 2025-11-27 12:07:36,171 | INFO     | mean y: 2930333.494875549
[2025-11-27 07:08:24] 2025-11-27 12:07:36,171 | INFO     | intersect: -22000299874.50701
[2025-11-27 07:08:24] 2025-11-27 12:07:36,171 | INFO     | chi2: 3.200131472922503
[2025-11-27 07:08:24] 2025-11-27 12:07:36,171 | INFO     | current chi2=3.200131472922503 (change=27.814847731311453 %)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,172 | INFO     | sum of square deviations: 96654473888.91606
[2025-11-27 07:08:24] 2025-11-27 12:07:36,183 | INFO     | sum of deviations: 1229480415261.7124
[2025-11-27 07:08:24] 2025-11-27 12:07:36,183 | INFO     | mean x: 1764223340.2876105
[2025-11-27 07:08:24] 2025-11-27 12:07:36,183 | INFO     | mean y: 2930127.0014749262
[2025-11-27 07:08:24] 2025-11-27 12:07:36,183 | INFO     | intersect: -22438638873.97529
[2025-11-27 07:08:24] 2025-11-27 12:07:36,184 | INFO     | chi2: 3.163456276709877
[2025-11-27 07:08:24] 2025-11-27 12:07:36,184 | INFO     | current chi2=3.163456276709877 (change=1.146052795735075 %)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,184 | INFO     | right removable region: 677
[2025-11-27 07:08:24] 2025-11-27 12:07:36,185 | INFO     | sum of square deviations: 103210174814.75601
[2025-11-27 07:08:24] 2025-11-27 12:07:36,202 | INFO     | sum of deviations: 377125933741.03296
[2025-11-27 07:08:24] 2025-11-27 12:07:36,202 | INFO     | mean x: 1764224102.7590187
[2025-11-27 07:08:24] 2025-11-27 12:07:36,202 | INFO     | mean y: 2903677.754689755
[2025-11-27 07:08:24] 2025-11-27 12:07:36,202 | INFO     | intersect: -6443502049.932419
[2025-11-27 07:08:24] 2025-11-27 12:07:36,203 | INFO     | chi2: 8.92289199231713
[2025-11-27 07:08:24] 2025-11-27 12:07:36,203 | INFO     | current chi2=8.92289199231713 (change=24.2049369376904 %)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,203 | INFO     | left removable region: 10
[2025-11-27 07:08:24] 2025-11-27 12:07:36,203 | INFO     | sum of square deviations: 92026007277.27122
[2025-11-27 07:08:24] 2025-11-27 12:07:36,212 | INFO     | sum of deviations: 933943613739.7771
[2025-11-27 07:08:24] 2025-11-27 12:07:36,212 | INFO     | mean x: 1764223614.8035982
[2025-11-27 07:08:24] 2025-11-27 12:07:36,212 | INFO     | mean y: 2950808.5097451275
[2025-11-27 07:08:24] 2025-11-27 12:07:36,213 | INFO     | intersect: -17901611466.916428
[2025-11-27 07:08:24] 2025-11-27 12:07:36,213 | INFO     | chi2: 0.11831451463906482
[2025-11-27 07:08:24] 2025-11-27 12:07:36,213 | INFO     | current memory leak: 10.15 B/s (using 667 data points, chi2=0.12)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | could have reported an average CPU frequency of 3288 MHz (27 samples)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | ..............................
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . Timing measurements:
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . get job = 0 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . initial setup = 3 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . payload setup = 19 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . stage-in = 0 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,214 | INFO     | . payload execution = 42540 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,215 | INFO     | . stage-out = 7 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,215 | INFO     | . log creation = 2 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,215 | INFO     | ..............................
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | 
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | job summary report
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | --------------------------------------------------
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | PanDA job id: 6896766812
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | task id: 47556185
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | errors: (none)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | pilot state: finished 
[2025-11-27 07:08:24] 2025-11-27 12:07:36,806 | INFO     | transexitcode: 0
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | exeerrorcode: 0
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | exeerrordiag: 
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | exitcode: 0
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | exitmsg: OK
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | cpuconsumptiontime: 200150 s
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | nevents: 1000
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | neventsw: 0
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | pid: 2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | pgrp: 2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | corecount: 8
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | event service: False
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | sizes: {0: 2283434, 1: 2284290, 2: 2284290, 13: 2284636, 23: 2284636, 42563: 2328623, 42564: 2328750, 42573: 2337856, 42601: 2338046}
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | --------------------------------------------------
[2025-11-27 07:08:24] 2025-11-27 12:07:36,807 | INFO     | 
[2025-11-27 07:08:24] 2025-11-27 12:07:36,808 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 07:08:24] 2025-11-27 12:07:36,962 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | job 6896766812 has completed (purged errors)
[2025-11-27 07:08:24] 2025-11-27 12:07:36,964 | INFO     | overall cleanup function is called
[2025-11-27 07:08:24] 2025-11-27 12:07:38,075 | INFO     | --- collectZombieJob: --- 10, [2390802]
[2025-11-27 07:08:24] 2025-11-27 12:07:38,075 | INFO     | zombie collector waiting for pid 2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:38,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:08:24] 2025-11-27 12:07:38,075 | INFO     | collected zombie processes
[2025-11-27 07:08:24] 2025-11-27 12:07:38,075 | INFO     | will attempt to kill all subprocesses of pid=2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:38,391 | INFO     | PID=2368443 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:08:24] 2025-11-27 12:07:38,391 | INFO     | .. there are 56 such processes running
[2025-11-27 07:08:24] 2025-11-27 12:07:40,557 | INFO     | process IDs to be killed: [2390802] (in reverse order)
[2025-11-27 07:08:24] 2025-11-27 12:07:41,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:08:24] 2025-11-27 12:07:41,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:08:24] 2025-11-27 12:07:41,338 | INFO     | did not find any defunct processes belonging to 2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:41,434 | INFO     | did not find any defunct processes belonging to 2390802
[2025-11-27 07:08:24] 2025-11-27 12:07:41,460 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:08:24] 2025-11-27 12:07:41,460 | INFO     | ready for new job
[2025-11-27 07:08:24] 2025-11-27 12:07:41,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:08:24] 2025-11-27 12:07:41,487 | INFO     | ***************************************
[2025-11-27 07:08:24] 2025-11-27 12:07:41,487 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:08:24] 2025-11-27 12:07:41,487 | INFO     | ***************************************
[2025-11-27 07:08:24] 2025-11-27 12:07:41,487 | INFO     | 
[2025-11-27 07:08:24] 2025-11-27 12:07:41,519 | INFO     | architecture information:
[2025-11-27 07:08:24] 2025-11-27 12:07:41,546 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:08:24] 2025-11-27 12:07:41,615 | INFO     | cat /etc/os-release:
[2025-11-27 07:08:24] NAME="CentOS Linux"
[2025-11-27 07:08:24] VERSION="7 (Core)"
[2025-11-27 07:08:24] ID="centos"
[2025-11-27 07:08:24] ID_LIKE="rhel fedora"
[2025-11-27 07:08:24] VERSION_ID="7"
[2025-11-27 07:08:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:08:24] ANSI_COLOR="0;31"
[2025-11-27 07:08:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:08:24] HOME_URL="https://www.centos.org/"
[2025-11-27 07:08:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:08:24] 
[2025-11-27 07:08:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:08:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:08:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:08:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:08:24] 
[2025-11-27 07:08:24] 2025-11-27 12:07:41,615 | INFO     | ***************************************
[2025-11-27 07:08:24] 2025-11-27 12:07:42,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 07:08:24] 2025-11-27 12:07:42,650 | INFO     | sufficient remaining disk space (76670828544 B)
[2025-11-27 07:08:24] 2025-11-27 12:07:42,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:08:24] 2025-11-27 12:07:42,652 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:08:24] 2025-11-27 12:07:42,652 | INFO     | update_server=False
[2025-11-27 07:08:24] 2025-11-27 12:07:42,652 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:08:24] 2025-11-27 12:07:42,739 | INFO     | all data control threads have been joined
[2025-11-27 07:08:24] 2025-11-27 12:07:42,768 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 07:08:24] 2025-11-27 12:07:42,768 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 07:08:24] 2025-11-27 12:07:42,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:08:24] 2025-11-27 12:07:42,768 | INFO     | will abort loop
[2025-11-27 07:08:24] 2025-11-27 12:07:43,575 | INFO     | all job control threads have been joined
[2025-11-27 07:08:24] 2025-11-27 12:07:43,660 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,747 | INFO     | [data] control thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,773 | INFO     | [job] validate thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,773 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,774 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:08:24] 2025-11-27 12:07:43,845 | INFO     | all payload control threads have been joined
[2025-11-27 07:08:24] 2025-11-27 12:07:43,864 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,864 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:43,967 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:44,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:44,462 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:44,592 | INFO     | [job] control thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:44,851 | INFO     | [payload] control thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:44,964 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:45,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:08:24] 2025-11-27 12:07:45,836 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:45,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:08:24] 2025-11-27 12:07:46,620 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:07:49,912 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:08:24] 2025-11-27 12:08:12,134 | INFO     | PID=2368443 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:08:24] 2025-11-27 12:08:12,134 | INFO     | .. there are 55 such processes running
[2025-11-27 07:08:24] 2025-11-27 12:08:12,134 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:08:24] 2025-11-27 12:08:12,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:08:24] 2025-11-27 12:08:12,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:08:24] 2025-11-27 12:08:14,142 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:08:24] 2025-11-27 12:08:15,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425350862656)>', '<ExcThread(monitor, started 140424559720192)>']
[2025-11-27 07:08:24] 2025-11-27 12:08:16,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:08:24] 2025-11-27 12:08:16,162 | INFO     | [monitor] control thread has ended
[2025-11-27 07:08:24] 2025-11-27 12:08:21,023 | INFO     | all workflow threads have been joined
[2025-11-27 07:08:24] 2025-11-27 12:08:21,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:08:24] 2025-11-27 12:08:21,026 | INFO     | traces error code: 0
[2025-11-27 07:08:24] 2025-11-27 12:08:21,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:08:24] 2025-11-27 12:08:21,315 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:08:24] 2025-11-27 12:08:21,501 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:08:24] 2025-11-27 12:08:21,597 [wrapper] pilotpid: 2368443
[2025-11-27 07:08:24] 2025-11-27 12:08:21,758 [wrapper] Pilot exit status: 0
[2025-11-27 07:08:24] 2025-11-27 12:08:21,963 [wrapper] pandaids: 6896766812
[2025-11-27 07:08:24] 2025-11-27 12:08:22,380 [wrapper] cleanup supervisor_pilot 2142171 2368444
[2025-11-27 07:08:24] 2025-11-27 12:08:22,565 [wrapper] Test setup, not cleaning
[2025-11-27 07:08:24] 2025-11-27 12:08:22,866 [wrapper] apfmon messages muted
[2025-11-27 07:08:24] 2025-11-27 12:08:22,953 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:08:24] 2025-11-27 12:08:22,983 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:08:24]  *** Error codes and diagnostics ***
[2025-11-27 07:08:24]     "exeErrorCode": 0,
[2025-11-27 07:08:24]     "exeErrorDiag": "",
[2025-11-27 07:08:24]     "pilotErrorCode": 0,
[2025-11-27 07:08:24]     "pilotErrorDiag": "",
[2025-11-27 07:08:24]  *** Listing of results directory ***
[2025-11-27 07:08:24] total 1324332
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 04:44 pilot3.tar.gz
[2025-11-27 07:08:24] -rwx------. 1 boincer umatlas     36292 Nov 25 05:21 runpilot2-wrapper.sh
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 05:21 queuedata.json
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:08:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:16 run_atlas
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:16 job.xml
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas 409732007 Nov 26 19:16 EVNT.47483658._004283.pool.root.1
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:16 start_atlas.sh
[2025-11-27 07:08:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:16 shared
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 19:16 input.tar.gz
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:16 boinc_lockfile
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 19:16 pandaJob.out
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas        57 Nov 26 19:16 setup.sh.local
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas    991546 Nov 26 19:16 agis_schedconf.cvmfs.json
[2025-11-27 07:08:24] drwx------. 5 boincer umatlas      4096 Nov 26 19:16 pilot3
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:49 boinc_task_state.xml
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas      6904 Nov 27 07:01 init_data.xml
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas 927897556 Nov 27 07:04 HITS.47556185._000466.pool.root.1
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas      1050 Nov 27 07:06 memory_monitor_summary.json
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:07 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas   1922894 Nov 27 07:07 log.47556185._000466.job.log.tgz.1
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas      8583 Nov 27 07:07 heartbeat.json
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas        95 Nov 27 07:07 pilot_heartbeat.json
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:08 boinc_mmap_file
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:08 wrapper_checkpoint.txt
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas      5010 Nov 27 07:08 pilotlog.txt
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas   5356527 Nov 27 07:08 log.47556185._000466.job.log.1
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas       353 Nov 27 07:08 output.list
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:08 runtime_log
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas   7301120 Nov 27 07:08 result.tar.gz
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 07:08 runtime_log.err
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas       660 Nov 27 07:08 4QDODmGM5h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4PJKDmNaTzxm.diag
[2025-11-27 07:08:24] -rw-r--r--. 1 boincer umatlas     21301 Nov 27 07:08 stderr.txt
[2025-11-27 07:08:24] HITS file was successfully produced:
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas 927897556 Nov 27 07:04 shared/HITS.pool.root.1
[2025-11-27 07:08:24]  *** Contents of shared directory: ***
[2025-11-27 07:08:24] total 1314020
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas 409732007 Nov 26 19:16 ATLAS.root_0
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:16 start_atlas.sh
[2025-11-27 07:08:24] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 19:16 input.tar.gz
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas 927897556 Nov 27 07:04 HITS.pool.root.1
[2025-11-27 07:08:24] -rw-------. 1 boincer umatlas   7301120 Nov 27 07:08 result.tar.gz
07:08:25 (2361566): run_atlas exited; CPU time 200519.856708
07:08:25 (2361566): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN