Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:56:33 (1934393): wrapper (7.7.26015): starting
20:56:33 (1934393): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:56:33] Arguments: --nthreads 8
[2025-11-26 20:56:33] Threads: 8
[2025-11-26 20:56:33] Checking for CVMFS
[2025-11-26 20:56:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:56:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:56:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:56:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:56:34] 2.13.3.0 12525 30723 236628 153342 0 661 36449182 40960000 44447 16776704 0 243842416 99.716 188302023 35063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 20:56:34] CVMFS is ok
[2025-11-26 20:56:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 20:56:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 20:56:34] Further information can be found at the LHC@home message board.
[2025-11-26 20:56:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:56:34] Checking for apptainer binary...
[2025-11-26 20:56:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:56:34] Running /usr/bin/apptainer --version
[2025-11-26 20:56:34] apptainer version 1.4.4-1.el9
[2025-11-26 20:56:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:56:34] c7-4-30.aglt2.org
[2025-11-26 20:56:34] apptainer works
[2025-11-26 20:56:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:56:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:56:34] Starting ATLAS job with PandaID=6897999560
[2025-11-26 20:56:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:57:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:57:55] 2025-11-27 16:57:14,033 | INFO     | time since job start (54023s) is within the limit (172800.0s)
[2025-11-27 11:57:55] 2025-11-27 16:57:15,742 | INFO     | monitor loop #2966: job 0:6897999560 is in state 'finished'
[2025-11-27 11:57:55] 2025-11-27 16:57:15,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:57:55] 2025-11-27 16:57:16,040 | INFO     | time since job start (54025s) is within the limit (172800.0s)
[2025-11-27 11:57:55] 2025-11-27 16:57:16,040 | INFO     | 54027s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 11:57:55] 2025-11-27 16:57:18,046 | INFO     | time since job start (54027s) is within the limit (172800.0s)
[2025-11-27 11:57:55] 2025-11-27 16:57:18,246 | INFO     | monitor loop #2967: job 0:6897999560 is in state 'finished'
[2025-11-27 11:57:55] 2025-11-27 16:57:18,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,053 | INFO     | time since job start (54029s) is within the limit (172800.0s)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,503 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 11:57:55] 2025-11-27 16:57:20,511 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3238.8654062500013
[2025-11-27 11:57:55] 2025-11-27 16:57:20,527 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897999560/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,528 | INFO     | extracted standard info from prmon json
[2025-11-27 11:57:55] 2025-11-27 16:57:20,528 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:57:55] 2025-11-27 16:57:20,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:57:55] 2025-11-27 16:57:20,542 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:57:55] 2025-11-27 16:57:20,543 | INFO     | sum of square deviations: 214935898362.19897
[2025-11-27 11:57:55] 2025-11-27 16:57:20,559 | INFO     | sum of deviations: 5637951214279.978
[2025-11-27 11:57:55] 2025-11-27 16:57:20,560 | INFO     | mean x: 1764235611.5344632
[2025-11-27 11:57:55] 2025-11-27 16:57:20,560 | INFO     | mean y: 3619048.492655367
[2025-11-27 11:57:55] 2025-11-27 16:57:20,560 | INFO     | intersect: -46273779860.29772
[2025-11-27 11:57:55] 2025-11-27 16:57:20,561 | INFO     | chi2: 13.996503187147004
[2025-11-27 11:57:55] 2025-11-27 16:57:20,562 | INFO     | sum of square deviations: 211313611915.76227
[2025-11-27 11:57:55] 2025-11-27 16:57:20,577 | INFO     | sum of deviations: 6046743291039.889
[2025-11-27 11:57:55] 2025-11-27 16:57:20,577 | INFO     | mean x: 1764235459.0375
[2025-11-27 11:57:55] 2025-11-27 16:57:20,577 | INFO     | mean y: 3636263.1852272726
[2025-11-27 11:57:55] 2025-11-27 16:57:20,577 | INFO     | intersect: -50479997181.13027
[2025-11-27 11:57:55] 2025-11-27 16:57:20,578 | INFO     | chi2: 9.883292923145355
[2025-11-27 11:57:55] 2025-11-27 16:57:20,578 | INFO     | current chi2=9.883292923145355 (change=29.387413477523534 %)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,579 | INFO     | sum of square deviations: 207732203033.38953
[2025-11-27 11:57:55] 2025-11-27 16:57:20,594 | INFO     | sum of deviations: 6154517912626.701
[2025-11-27 11:57:55] 2025-11-27 16:57:20,594 | INFO     | mean x: 1764235306.5394285
[2025-11-27 11:57:55] 2025-11-27 16:57:20,594 | INFO     | mean y: 3640841.254857143
[2025-11-27 11:57:55] 2025-11-27 16:57:20,594 | INFO     | intersect: -52265663761.65316
[2025-11-27 11:57:55] 2025-11-27 16:57:20,595 | INFO     | chi2: 9.026706214878738
[2025-11-27 11:57:55] 2025-11-27 16:57:20,595 | INFO     | current chi2=9.026706214878738 (change=8.667017308174739 %)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,595 | INFO     | right removable region: 874
[2025-11-27 11:57:55] 2025-11-27 16:57:20,596 | INFO     | sum of square deviations: 211313323385.7623
[2025-11-27 11:57:55] 2025-11-27 16:57:20,612 | INFO     | sum of deviations: 5302521188507.663
[2025-11-27 11:57:55] 2025-11-27 16:57:20,612 | INFO     | mean x: 1764235764.0375
[2025-11-27 11:57:55] 2025-11-27 16:57:20,612 | INFO     | mean y: 3633153.6159090907
[2025-11-27 11:57:55] 2025-11-27 16:57:20,612 | INFO     | intersect: -44266635140.135025
[2025-11-27 11:57:55] 2025-11-27 16:57:20,613 | INFO     | chi2: 11.758721504584418
[2025-11-27 11:57:55] 2025-11-27 16:57:20,613 | INFO     | current chi2=11.758721504584418 (change=15.9881482727596 %)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,613 | INFO     | left removable region: 10
[2025-11-27 11:57:55] 2025-11-27 16:57:20,614 | INFO     | sum of square deviations: 199995628479.2395
[2025-11-27 11:57:55] 2025-11-27 16:57:20,629 | INFO     | sum of deviations: 5684180816243.334
[2025-11-27 11:57:55] 2025-11-27 16:57:20,629 | INFO     | mean x: 1764235581.0451388
[2025-11-27 11:57:55] 2025-11-27 16:57:20,629 | INFO     | mean y: 3661651.734953704
[2025-11-27 11:57:55] 2025-11-27 16:57:20,630 | INFO     | intersect: -50138604563.607185
[2025-11-27 11:57:55] 2025-11-27 16:57:20,630 | INFO     | chi2: 6.669680203097892
[2025-11-27 11:57:55] 2025-11-27 16:57:20,630 | INFO     | current memory leak: 28.42 B/s (using 864 data points, chi2=6.67)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,631 | INFO     | could have reported an average CPU frequency of 3110 MHz (33 samples)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,631 | INFO     | ..............................
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . Timing measurements:
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . get job = 0 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . initial setup = 2 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . payload setup = 9 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . stage-in = 0 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . payload execution = 53983 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . stage-out = 4 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | . log creation = 0 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,632 | INFO     | ..............................
[2025-11-27 11:57:55] 2025-11-27 16:57:20,709 | INFO     | 
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | job summary report
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | --------------------------------------------------
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | PanDA job id: 6897999560
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | task id: 47556173
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | errors: (none)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | pilot state: finished 
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | transexitcode: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | exeerrorcode: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | exeerrordiag: 
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | exitcode: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:20,710 | INFO     | exitmsg: OK
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | cpuconsumptiontime: 201285 s
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | nevents: 1000
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | neventsw: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | pid: 1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | pgrp: 1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | corecount: 8
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | event service: False
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | sizes: {0: 2284264, 8: 2284526, 11: 2284554, 53994: 2334077, 53998: 2343071, 54001: 2343127, 54011: 2343565}
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | --------------------------------------------------
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | 
[2025-11-27 11:57:55] 2025-11-27 16:57:20,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,747 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | job 6897999560 has completed (purged errors)
[2025-11-27 11:57:55] 2025-11-27 16:57:20,748 | INFO     | overall cleanup function is called
[2025-11-27 11:57:55] 2025-11-27 16:57:21,766 | INFO     | --- collectZombieJob: --- 10, [1961392]
[2025-11-27 11:57:55] 2025-11-27 16:57:21,766 | INFO     | zombie collector waiting for pid 1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:21,767 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:57:55] 2025-11-27 16:57:21,767 | INFO     | collected zombie processes
[2025-11-27 11:57:55] 2025-11-27 16:57:21,767 | INFO     | will attempt to kill all subprocesses of pid=1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:22,494 | INFO     | process IDs to be killed: [1961392] (in reverse order)
[2025-11-27 11:57:55] 2025-11-27 16:57:22,744 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:57:55] 2025-11-27 16:57:22,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:57:55] 2025-11-27 16:57:22,773 | INFO     | did not find any defunct processes belonging to 1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:22,803 | INFO     | did not find any defunct processes belonging to 1961392
[2025-11-27 11:57:55] 2025-11-27 16:57:22,805 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:57:55] 2025-11-27 16:57:22,805 | INFO     | ready for new job
[2025-11-27 11:57:55] 2025-11-27 16:57:22,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:57:55] 2025-11-27 16:57:22,809 | INFO     | ***************************************
[2025-11-27 11:57:55] 2025-11-27 16:57:22,809 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:57:55] 2025-11-27 16:57:22,809 | INFO     | ***************************************
[2025-11-27 11:57:55] 2025-11-27 16:57:22,809 | INFO     | 
[2025-11-27 11:57:55] 2025-11-27 16:57:22,814 | INFO     | architecture information:
[2025-11-27 11:57:55] 2025-11-27 16:57:22,814 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:57:55] 2025-11-27 16:57:22,842 | INFO     | cat /etc/os-release:
[2025-11-27 11:57:55] NAME="CentOS Linux"
[2025-11-27 11:57:55] VERSION="7 (Core)"
[2025-11-27 11:57:55] ID="centos"
[2025-11-27 11:57:55] ID_LIKE="rhel fedora"
[2025-11-27 11:57:55] VERSION_ID="7"
[2025-11-27 11:57:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:57:55] ANSI_COLOR="0;31"
[2025-11-27 11:57:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:57:55] HOME_URL="https://www.centos.org/"
[2025-11-27 11:57:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:57:55] 
[2025-11-27 11:57:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:57:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:57:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:57:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:57:55] 
[2025-11-27 11:57:55] 2025-11-27 16:57:22,843 | INFO     | ***************************************
[2025-11-27 11:57:55] 2025-11-27 16:57:23,347 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 11:57:55] 2025-11-27 16:57:23,376 | INFO     | sufficient remaining disk space (119163322368 B)
[2025-11-27 11:57:55] 2025-11-27 16:57:23,376 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:57:55] 2025-11-27 16:57:23,376 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:57:55] 2025-11-27 16:57:23,376 | INFO     | update_server=False
[2025-11-27 11:57:55] 2025-11-27 16:57:23,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:57:55] 2025-11-27 16:57:23,612 | INFO     | all job control threads have been joined
[2025-11-27 11:57:55] 2025-11-27 16:57:23,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:57:55] 2025-11-27 16:57:24,177 | INFO     | all data control threads have been joined
[2025-11-27 11:57:55] 2025-11-27 16:57:24,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:57:55] 2025-11-27 16:57:24,269 | INFO     | aborting loop
[2025-11-27 11:57:55] 2025-11-27 16:57:24,388 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:24,427 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:24,493 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:24,545 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:24,617 | INFO     | [job] control thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:24,639 | INFO     | all payload control threads have been joined
[2025-11-27 11:57:55] 2025-11-27 16:57:25,057 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,073 | INFO     | [job] validate thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,137 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,186 | INFO     | [data] control thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,277 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,467 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,645 | INFO     | [payload] control thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:25,736 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:57:55] 2025-11-27 16:57:25,931 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:57:55] 2025-11-27 16:57:25,958 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:26,743 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:28,979 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:57:55] 2025-11-27 16:57:29,940 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:34,081 | INFO     | job.realtimelogging is not enabled
[2025-11-27 11:57:55] 2025-11-27 16:57:35,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:57:55] 2025-11-27 16:57:35,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485831780160)>', '<ExcThread(monitor, started 140485326780160)>']
[2025-11-27 11:57:55] 2025-11-27 16:57:40,630 | INFO     | all workflow threads have been joined
[2025-11-27 11:57:55] 2025-11-27 16:57:40,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:57:55] 2025-11-27 16:57:40,631 | INFO     | traces error code: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:40,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:57:55] 2025-11-27 16:57:54,523 | INFO     | PID=1943244 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:57:55] 2025-11-27 16:57:54,523 | INFO     | .. there are 68 such processes running
[2025-11-27 11:57:55] 2025-11-27 16:57:54,524 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:57:55] 2025-11-27 16:57:54,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:57:55] 2025-11-27 16:57:54,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:57:55] 2025-11-27 16:57:54,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:57:55] 2025-11-27 16:57:54,524 | INFO     | [monitor] control thread has ended
[2025-11-27 11:57:55] 2025-11-27 16:57:54,659 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:57:55] 2025-11-27 16:57:54,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:57:55] 2025-11-27 16:57:54,680 [wrapper] pilotpid: 1943244
[2025-11-27 11:57:55] 2025-11-27 16:57:54,705 [wrapper] Pilot exit status: 0
[2025-11-27 11:57:55] 2025-11-27 16:57:54,762 [wrapper] pandaids: 6897999560
[2025-11-27 11:57:55] 2025-11-27 16:57:54,993 [wrapper] cleanup supervisor_pilot 3211297 1943245
[2025-11-27 11:57:55] 2025-11-27 16:57:55,045 [wrapper] Test setup, not cleaning
[2025-11-27 11:57:55] 2025-11-27 16:57:55,105 [wrapper] apfmon messages muted
[2025-11-27 11:57:55] 2025-11-27 16:57:55,163 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:57:55] 2025-11-27 16:57:55,170 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:57:55]  *** Error codes and diagnostics ***
[2025-11-27 11:57:55]     "exeErrorCode": 0,
[2025-11-27 11:57:55]     "exeErrorDiag": "",
[2025-11-27 11:57:55]     "pilotErrorCode": 0,
[2025-11-27 11:57:55]     "pilotErrorDiag": "",
[2025-11-27 11:57:55]  *** Listing of results directory ***
[2025-11-27 11:57:55] total 1327380
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 21:38 pilot3.tar.gz
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:41 queuedata.json
[2025-11-27 11:57:55] -rwx------. 1 boincer umatlas     36292 Nov 25 21:44 runpilot2-wrapper.sh
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas       100 Nov 26 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:57:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 20:56 run_atlas
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas       105 Nov 26 20:56 job.xml
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas 411577891 Nov 26 20:56 EVNT.47483658._003153.pool.root.1
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 20:56 start_atlas.sh
[2025-11-27 11:57:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 20:56 shared
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 20:56 input.tar.gz
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas         0 Nov 26 20:56 boinc_lockfile
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 20:56 pandaJob.out
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas        57 Nov 26 20:56 setup.sh.local
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas    991530 Nov 26 20:56 agis_schedconf.cvmfs.json
[2025-11-27 11:57:55] drwx------. 5 boincer umatlas      4096 Nov 26 20:56 pilot3
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:44 boinc_task_state.xml
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas 926752028 Nov 27 11:56 HITS.47556173._001100.pool.root.1
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas      1074 Nov 27 11:57 memory_monitor_summary.json
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas   2031976 Nov 27 11:57 log.47556173._001100.job.log.tgz.1
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas      8646 Nov 27 11:57 heartbeat.json
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 11:57 init_data.xml
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 11:57 boinc_mmap_file
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas        95 Nov 27 11:57 pilot_heartbeat.json
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas       823 Nov 27 11:57 pilotlog.txt
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas        29 Nov 27 11:57 wrapper_checkpoint.txt
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas   6465086 Nov 27 11:57 log.47556173._001100.job.log.1
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas       353 Nov 27 11:57 output.list
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:57 runtime_log
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas   8519680 Nov 27 11:57 result.tar.gz
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas       664 Nov 27 11:57 yeJLDmnhKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnkMKDm3B2gAo.diag
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 11:57 runtime_log.err
[2025-11-27 11:57:55] -rw-r--r--. 1 boincer umatlas     16095 Nov 27 11:57 stderr.txt
[2025-11-27 11:57:55] HITS file was successfully produced:
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas 926752028 Nov 27 11:56 shared/HITS.pool.root.1
[2025-11-27 11:57:55]  *** Contents of shared directory: ***
[2025-11-27 11:57:55] total 1315888
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas 411577891 Nov 26 20:56 ATLAS.root_0
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 20:56 start_atlas.sh
[2025-11-27 11:57:55] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 20:56 input.tar.gz
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas 926752028 Nov 27 11:56 HITS.pool.root.1
[2025-11-27 11:57:55] -rw-------. 1 boincer umatlas   8519680 Nov 27 11:57 result.tar.gz
11:57:57 (1934393): run_atlas exited; CPU time 202630.274511
11:57:57 (1934393): called boinc_finish(0)

</stderr_txt>
]]>

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