Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:22:14 (1303682): wrapper (7.7.26015): starting
19:22:14 (1303682): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:22:14] Arguments: --nthreads 8
[2025-11-26 19:22:14] Threads: 8
[2025-11-26 19:22:14] Checking for CVMFS
[2025-11-26 19:22:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:22:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:22:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:22:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:22:15] 2.13.3.0 9702 30766 322932 153341 1 137 28152981 32935937 28114 16776704 0 159575228 99.696 114759976 32294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:22:15] CVMFS is ok
[2025-11-26 19:22:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:22:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:22:15] Further information can be found at the LHC@home message board.
[2025-11-26 19:22:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:22:15] Checking for apptainer binary...
[2025-11-26 19:22:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:22:15] Running /usr/bin/apptainer --version
[2025-11-26 19:22:15] apptainer version 1.4.4-1.el9
[2025-11-26 19:22:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:22:16] c-4-37.aglt2.org
[2025-11-26 19:22:16] apptainer works
[2025-11-26 19:22:16] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:22:16] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:22:16] Starting ATLAS job with PandaID=6897139655
[2025-11-26 19:22:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:26:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:26:30] 2025-11-27 16:51:30,008 | INFO     | monitor loop #3789: job 0:6897139655 is in state 'finished'
[2025-11-27 12:26:30] 2025-11-27 16:51:30,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,738 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 12:26:30] 2025-11-27 16:51:30,747 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.844225
[2025-11-27 12:26:30] 2025-11-27 16:51:30,755 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6897139655/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,756 | INFO     | extracted standard info from prmon json
[2025-11-27 12:26:30] 2025-11-27 16:51:30,756 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:26:30] 2025-11-27 16:51:30,756 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:26:30] 2025-11-27 16:51:30,780 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:26:30] 2025-11-27 16:51:30,781 | INFO     | sum of square deviations: 284767711726.89703
[2025-11-27 12:26:30] 2025-11-27 16:51:30,808 | INFO     | sum of deviations: 1607079024951.9019
[2025-11-27 12:26:30] 2025-11-27 16:51:30,808 | INFO     | mean x: 1764232604.489712
[2025-11-27 12:26:30] 2025-11-27 16:51:30,808 | INFO     | mean y: 2955818.7901234566
[2025-11-27 12:26:30] 2025-11-27 16:51:30,808 | INFO     | intersect: -9953444071.555603
[2025-11-27 12:26:30] 2025-11-27 16:51:30,810 | INFO     | chi2: 7.184377381001931
[2025-11-27 12:26:30] 2025-11-27 16:51:30,811 | INFO     | sum of square deviations: 280396146416.9742
[2025-11-27 12:26:30] 2025-11-27 16:51:30,837 | INFO     | sum of deviations: 1935496013532.6814
[2025-11-27 12:26:30] 2025-11-27 16:51:30,837 | INFO     | mean x: 1764232451.9948294
[2025-11-27 12:26:30] 2025-11-27 16:51:30,837 | INFO     | mean y: 2967276.5367114786
[2025-11-27 12:26:30] 2025-11-27 16:51:30,838 | INFO     | intersect: -12175034887.241488
[2025-11-27 12:26:30] 2025-11-27 16:51:30,839 | INFO     | chi2: 4.170029567482574
[2025-11-27 12:26:30] 2025-11-27 16:51:30,839 | INFO     | current chi2=4.170029567482574 (change=41.956980454428425 %)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,841 | INFO     | sum of square deviations: 276069558694.5
[2025-11-27 12:26:30] 2025-11-27 16:51:30,865 | INFO     | sum of deviations: 2111571437073.9983
[2025-11-27 12:26:30] 2025-11-27 16:51:30,865 | INFO     | mean x: 1764232299.5
[2025-11-27 12:26:30] 2025-11-27 16:51:30,866 | INFO     | mean y: 2973482.548856549
[2025-11-27 12:26:30] 2025-11-27 16:51:30,866 | INFO     | intersect: -13491098625.959196
[2025-11-27 12:26:30] 2025-11-27 16:51:30,867 | INFO     | chi2: 3.1808821289284452
[2025-11-27 12:26:30] 2025-11-27 16:51:30,867 | INFO     | current chi2=3.1808821289284452 (change=23.720393885630703 %)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,867 | INFO     | right removable region: 961
[2025-11-27 12:26:30] 2025-11-27 16:51:30,869 | INFO     | sum of square deviations: 280395559596.97437
[2025-11-27 12:26:30] 2025-11-27 16:51:30,894 | INFO     | sum of deviations: 1325397177625.709
[2025-11-27 12:26:30] 2025-11-27 16:51:30,894 | INFO     | mean x: 1764232756.9948294
[2025-11-27 12:26:30] 2025-11-27 16:51:30,894 | INFO     | mean y: 2965631.7414684594
[2025-11-27 12:26:30] 2025-11-27 16:51:30,895 | INFO     | intersect: -8336357288.196106
[2025-11-27 12:26:30] 2025-11-27 16:51:30,896 | INFO     | chi2: 4.8256047993761975
[2025-11-27 12:26:30] 2025-11-27 16:51:30,896 | INFO     | current chi2=4.8256047993761975 (change=32.83196937654157 %)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,898 | INFO     | sum of square deviations: 276068679994.47394
[2025-11-27 12:26:30] 2025-11-27 16:51:30,922 | INFO     | sum of deviations: 1264770836972.3374
[2025-11-27 12:26:30] 2025-11-27 16:51:30,922 | INFO     | mean x: 1764232909.4948025
[2025-11-27 12:26:30] 2025-11-27 16:51:30,922 | INFO     | mean y: 2967767.467775468
[2025-11-27 12:26:30] 2025-11-27 16:51:30,922 | INFO     | intersect: -8079623613.7803545
[2025-11-27 12:26:30] 2025-11-27 16:51:30,924 | INFO     | chi2: 4.784866507988054
[2025-11-27 12:26:30] 2025-11-27 16:51:30,924 | INFO     | current chi2=4.784866507988054 (change=0.8442111006149803 %)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,924 | INFO     | left removable region: 20
[2025-11-27 12:26:30] 2025-11-27 16:51:30,926 | INFO     | sum of square deviations: 258382033544.87158
[2025-11-27 12:26:30] 2025-11-27 16:51:30,950 | INFO     | sum of deviations: 1735276217351.6663
[2025-11-27 12:26:30] 2025-11-27 16:51:30,950 | INFO     | mean x: 1764232879.0116897
[2025-11-27 12:26:30] 2025-11-27 16:51:30,950 | INFO     | mean y: 2989490.121147715
[2025-11-27 12:26:30] 2025-11-27 16:51:30,951 | INFO     | intersect: -11845478899.176458
[2025-11-27 12:26:30] 2025-11-27 16:51:30,952 | INFO     | chi2: 0.55513706569776
[2025-11-27 12:26:30] 2025-11-27 16:51:30,952 | INFO     | current memory leak: 6.72 B/s (using 941 data points, chi2=0.56)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,953 | INFO     | could have reported an average CPU frequency of 2599 MHz (36 samples)
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | ..............................
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . Timing measurements:
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . get job = 0 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . initial setup = 3 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . payload setup = 10 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . stage-in = 0 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,954 | INFO     | . payload execution = 59288 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,955 | INFO     | . stage-out = 4 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,955 | INFO     | . log creation = 0 s
[2025-11-27 12:26:30] 2025-11-27 16:51:30,955 | INFO     | ..............................
[2025-11-27 12:26:30] 2025-11-27 16:51:31,015 | INFO     | time since job start (59340s) is within the limit (172800.0s)
[2025-11-27 12:26:30] 2025-11-27 16:51:31,080 | INFO     | 
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | job summary report
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | --------------------------------------------------
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | PanDA job id: 6897139655
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | task id: 47556161
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | errors: (none)
[2025-11-27 12:26:30] 2025-11-27 16:51:31,081 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | pilot state: finished 
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | transexitcode: 0
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | exeerrorcode: 0
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | exeerrordiag: 
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | exitcode: 0
[2025-11-27 12:26:30] 2025-11-27 16:51:31,082 | INFO     | exitmsg: OK
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | cpuconsumptiontime: 305499 s
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | nevents: 1000
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | neventsw: 0
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | pid: 1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | pgrp: 1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | corecount: 8
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | event service: False
[2025-11-27 12:26:30] 2025-11-27 16:51:31,083 | INFO     | sizes: {0: 2284265, 6: 2284527, 11: 2284555, 59302: 2337671, 59307: 2346665, 59309: 2346721, 59320: 2347095}
[2025-11-27 12:26:30] 2025-11-27 16:51:31,084 | INFO     | --------------------------------------------------
[2025-11-27 12:26:30] 2025-11-27 16:51:31,084 | INFO     | 
[2025-11-27 12:26:30] 2025-11-27 16:51:31,084 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:26:30] 2025-11-27 16:51:31,112 | INFO     | job 6897139655 has completed (purged errors)
[2025-11-27 12:26:30] 2025-11-27 16:51:31,113 | INFO     | overall cleanup function is called
[2025-11-27 12:26:30] 2025-11-27 16:51:32,130 | INFO     | --- collectZombieJob: --- 10, [1314573]
[2025-11-27 12:26:30] 2025-11-27 16:51:32,130 | INFO     | zombie collector waiting for pid 1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:32,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:26:30] 2025-11-27 16:51:32,131 | INFO     | collected zombie processes
[2025-11-27 12:26:30] 2025-11-27 16:51:32,131 | INFO     | will attempt to kill all subprocesses of pid=1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:32,673 | INFO     | process IDs to be killed: [1314573] (in reverse order)
[2025-11-27 12:26:30] 2025-11-27 16:51:32,843 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:26:30] 2025-11-27 16:51:32,843 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:26:30] 2025-11-27 16:51:32,864 | INFO     | did not find any defunct processes belonging to 1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:32,883 | INFO     | did not find any defunct processes belonging to 1314573
[2025-11-27 12:26:30] 2025-11-27 16:51:32,885 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:26:30] 2025-11-27 16:51:32,885 | INFO     | ready for new job
[2025-11-27 12:26:30] 2025-11-27 16:51:32,886 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:26:30] 2025-11-27 16:51:32,890 | INFO     | ***************************************
[2025-11-27 12:26:30] 2025-11-27 16:51:32,891 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:26:30] 2025-11-27 16:51:32,891 | INFO     | ***************************************
[2025-11-27 12:26:30] 2025-11-27 16:51:32,891 | INFO     | 
[2025-11-27 12:26:30] 2025-11-27 16:51:32,894 | INFO     | architecture information:
[2025-11-27 12:26:30] 2025-11-27 16:51:32,896 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:26:30] 2025-11-27 16:51:32,913 | INFO     | cat /etc/os-release:
[2025-11-27 12:26:30] NAME="CentOS Linux"
[2025-11-27 12:26:30] VERSION="7 (Core)"
[2025-11-27 12:26:30] ID="centos"
[2025-11-27 12:26:30] ID_LIKE="rhel fedora"
[2025-11-27 12:26:30] VERSION_ID="7"
[2025-11-27 12:26:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:26:30] ANSI_COLOR="0;31"
[2025-11-27 12:26:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:26:30] HOME_URL="https://www.centos.org/"
[2025-11-27 12:26:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:26:30] 
[2025-11-27 12:26:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:26:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:26:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:26:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:26:30] 
[2025-11-27 12:26:30] 2025-11-27 16:51:32,914 | INFO     | ***************************************
[2025-11-27 12:26:30] 2025-11-27 16:51:33,416 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 12:26:30] 2025-11-27 16:51:33,436 | INFO     | sufficient remaining disk space (70130860032 B)
[2025-11-27 12:26:30] 2025-11-27 16:51:33,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:26:30] 2025-11-27 16:51:33,436 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:26:30] 2025-11-27 16:51:33,436 | INFO     | update_server=False
[2025-11-27 12:26:30] 2025-11-27 16:51:33,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:26:30] 2025-11-27 16:51:33,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:26:30] 2025-11-27 16:51:33,533 | INFO     | aborting loop
[2025-11-27 12:26:30] 2025-11-27 16:51:33,832 | INFO     | all payload control threads have been joined
[2025-11-27 12:26:30] 2025-11-27 16:51:33,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:26:30] 2025-11-27 16:51:34,182 | INFO     | all data control threads have been joined
[2025-11-27 12:26:30] 2025-11-27 16:51:34,441 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:34,539 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:34,654 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:34,757 | INFO     | all job control threads have been joined
[2025-11-27 12:26:30] 2025-11-27 16:51:34,837 | INFO     | [payload] control thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:34,960 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:26:30] 2025-11-27 16:51:35,187 | INFO     | [data] control thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,265 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,363 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,508 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,577 | INFO     | [job] validate thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,606 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,655 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,723 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,762 | INFO     | [job] control thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:35,894 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:36,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:26:30] 2025-11-27 16:51:37,109 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:51:38,977 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:26:30] 2025-11-27 16:52:04,899 | INFO     | PID=1307425 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:26:30] 2025-11-27 16:52:04,899 | INFO     | .. there are 42 such processes running
[2025-11-27 12:26:30] 2025-11-27 16:52:04,900 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:26:30] 2025-11-27 16:52:04,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:26:30] 2025-11-27 16:52:04,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:26:30] 2025-11-27 16:52:17,046 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:26:30] 2025-11-27 16:52:19,034 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506859894592)>', '<ExcThread(monitor, started 140506587698944)>']
[2025-11-27 12:26:30] 2025-11-27 16:52:20,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:26:30] 2025-11-27 16:52:20,008 | INFO     | [monitor] control thread has ended
[2025-11-27 12:26:30] 2025-11-27 16:52:24,061 | INFO     | all workflow threads have been joined
[2025-11-27 12:26:30] 2025-11-27 16:52:24,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:26:30] 2025-11-27 16:52:24,061 | INFO     | traces error code: 0
[2025-11-27 12:26:30] 2025-11-27 16:52:24,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:26:30] 2025-11-27 16:52:24,229 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:26:30] 2025-11-27 16:52:24,233 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:26:30] 2025-11-27 16:52:24,236 [wrapper] pilotpid: 1307425
[2025-11-27 12:26:30] 2025-11-27 16:52:24,240 [wrapper] Pilot exit status: 0
[2025-11-27 12:26:30] 2025-11-27 16:52:24,257 [wrapper] pandaids: 6897139655
[2025-11-27 12:26:30] 2025-11-27 16:52:24,370 [wrapper] cleanup supervisor_pilot  692085 1307426
[2025-11-27 12:26:30] 2025-11-27 16:52:24,374 [wrapper] Test setup, not cleaning
[2025-11-27 12:26:30] 2025-11-27 16:52:24,378 [wrapper] apfmon messages muted
[2025-11-27 12:26:30] 2025-11-27 16:52:24,381 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:26:30] 2025-11-27 16:52:24,385 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:26:30]  *** Error codes and diagnostics ***
[2025-11-27 12:26:30]     "exeErrorCode": 0,
[2025-11-27 12:26:30]     "exeErrorDiag": "",
[2025-11-27 12:26:30]     "pilotErrorCode": 0,
[2025-11-27 12:26:30]     "pilotErrorDiag": "",
[2025-11-27 12:26:30]  *** Listing of results directory ***
[2025-11-27 12:26:30] total 1335892
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 12:26:30] -rwx------. 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:26:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:22 run_atlas
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:22 job.xml
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas 411464774 Nov 26 19:22 EVNT.47483658._002192.pool.root.1
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:22 start_atlas.sh
[2025-11-27 12:26:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:22 shared
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas    590109 Nov 26 19:22 input.tar.gz
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:22 boinc_lockfile
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 19:22 pandaJob.out
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas        57 Nov 26 19:22 setup.sh.local
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas    991546 Nov 26 19:22 agis_schedconf.cvmfs.json
[2025-11-27 12:26:30] drwx------. 5 boincer umatlas      4096 Nov 26 19:22 pilot3
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:32 boinc_task_state.xml
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas 932708351 Nov 27 11:50 HITS.47556161._001753.pool.root.1
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas      1058 Nov 27 11:51 memory_monitor_summary.json
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas   2141453 Nov 27 11:51 log.47556161._001753.job.log.tgz.1
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas      8611 Nov 27 11:51 heartbeat.json
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas        95 Nov 27 11:52 pilot_heartbeat.json
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas      4824 Nov 27 11:52 pilotlog.txt
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas   7795942 Nov 27 11:52 log.47556161._001753.job.log.1
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas       353 Nov 27 11:52 output.list
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:52 runtime_log
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas   9953280 Nov 27 11:52 result.tar.gz
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 11:52 runtime_log.err
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas       658 Nov 27 11:52 iQ3MDmTWBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZXJKDm7fQ9zn.diag
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas      6661 Nov 27 12:21 init_data.xml
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:26 wrapper_checkpoint.txt
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:26 boinc_mmap_file
[2025-11-27 12:26:30] -rw-r--r--. 1 boincer umatlas     14711 Nov 27 12:26 stderr.txt
[2025-11-27 12:26:30] HITS file was successfully produced:
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas 932708351 Nov 27 11:50 shared/HITS.pool.root.1
[2025-11-27 12:26:30]  *** Contents of shared directory: ***
[2025-11-27 12:26:30] total 1322992
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas 411464774 Nov 26 19:22 ATLAS.root_0
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:22 start_atlas.sh
[2025-11-27 12:26:30] -rw-r--r--. 2 boincer umatlas    590109 Nov 26 19:22 input.tar.gz
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas 932708351 Nov 27 11:50 HITS.pool.root.1
[2025-11-27 12:26:30] -rw-------. 1 boincer umatlas   9953280 Nov 27 11:52 result.tar.gz
12:26:32 (1303682): run_atlas exited; CPU time 307850.175282
12:26:32 (1303682): called boinc_finish(0)

</stderr_txt>
]]>

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