Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:50:32 (6420): wrapper (7.7.26015): starting
18:50:32 (6420): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 18:50:32] Arguments: --nthreads 12
[2025-11-26 18:50:32] Threads: 12
[2025-11-26 18:50:32] Checking for CVMFS
[2025-11-26 18:50:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:50:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:50:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:50:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:50:33] 2.11.2.0 2910 39584 95208 153340 2 82 14693230 20275201 1 130560 0 6394217 99.861 1768223 27742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:50:33] CVMFS is ok
[2025-11-26 18:50:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:50:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:50:33] Further information can be found at the LHC@home message board.
[2025-11-26 18:50:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:50:33] Checking for apptainer binary...
[2025-11-26 18:50:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:50:33] Running /usr/bin/apptainer --version
[2025-11-26 18:50:33] apptainer version 1.3.2-1.el7
[2025-11-26 18:50:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:50:34] c-205-11.aglt2.org
[2025-11-26 18:50:34] apptainer works
[2025-11-26 18:50:34] Set ATHENA_PROC_NUMBER=12
[2025-11-26 18:50:34] Set ATHENA_CORE_NUMBER=12
[2025-11-26 18:50:34] Starting ATLAS job with PandaID=6897999056
[2025-11-26 18:50:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:47:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:47:36] 2025-11-27 06:46:56,270 | INFO     | time since job start (24966s) is within the limit (172800.0s)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,076 | INFO     | monitor loop #1863: job 0:6897999056 is in state 'finished'
[2025-11-27 01:47:36] 2025-11-27 06:46:57,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,850 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 01:47:36] 2025-11-27 06:46:57,853 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-27 01:47:36] 2025-11-27 06:46:57,856 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897999056/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,857 | INFO     | extracted standard info from prmon json
[2025-11-27 01:47:36] 2025-11-27 06:46:57,857 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:47:36] 2025-11-27 06:46:57,857 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:47:36] 2025-11-27 06:46:57,864 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:47:36] 2025-11-27 06:46:57,864 | INFO     | sum of square deviations: 21215215097.183327
[2025-11-27 01:47:36] 2025-11-27 06:46:57,869 | INFO     | sum of deviations: 342531059801.08344
[2025-11-27 01:47:36] 2025-11-27 06:46:57,869 | INFO     | mean x: 1764213523.3080685
[2025-11-27 01:47:36] 2025-11-27 06:46:57,869 | INFO     | mean y: 3899668.4596577017
[2025-11-27 01:47:36] 2025-11-27 06:46:57,869 | INFO     | intersect: -28480276668.47254
[2025-11-27 01:47:36] 2025-11-27 06:46:57,870 | INFO     | chi2: 6.781004356384111
[2025-11-27 01:47:36] 2025-11-27 06:46:57,870 | INFO     | sum of square deviations: 20446662371.702988
[2025-11-27 01:47:36] 2025-11-27 06:46:57,874 | INFO     | sum of deviations: 535596709949.1092
[2025-11-27 01:47:36] 2025-11-27 06:46:57,874 | INFO     | mean x: 1764213370.8118813
[2025-11-27 01:47:36] 2025-11-27 06:46:57,874 | INFO     | mean y: 3937959.4356435644
[2025-11-27 01:47:36] 2025-11-27 06:46:57,874 | INFO     | intersect: -46209319729.15262
[2025-11-27 01:47:36] 2025-11-27 06:46:57,874 | INFO     | chi2: 3.284007321167012
[2025-11-27 01:47:36] 2025-11-27 06:46:57,875 | INFO     | current chi2=3.284007321167012 (change=51.57048796060397 %)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,875 | INFO     | sum of square deviations: 19696900696.21057
[2025-11-27 01:47:36] 2025-11-27 06:46:57,878 | INFO     | sum of deviations: 588991801945.0522
[2025-11-27 01:47:36] 2025-11-27 06:46:57,879 | INFO     | mean x: 1764213218.3157895
[2025-11-27 01:47:36] 2025-11-27 06:46:57,879 | INFO     | mean y: 3948755.959899749
[2025-11-27 01:47:36] 2025-11-27 06:46:57,879 | INFO     | intersect: -52750905345.07171
[2025-11-27 01:47:36] 2025-11-27 06:46:57,879 | INFO     | chi2: 2.750899450655838
[2025-11-27 01:47:36] 2025-11-27 06:46:57,879 | INFO     | current chi2=2.750899450655838 (change=16.23345560392136 %)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,880 | INFO     | right removable region: 398
[2025-11-27 01:47:36] 2025-11-27 06:46:57,880 | INFO     | sum of square deviations: 20446585511.702984
[2025-11-27 01:47:36] 2025-11-27 06:46:57,884 | INFO     | sum of deviations: 178358767224.69348
[2025-11-27 01:47:36] 2025-11-27 06:46:57,884 | INFO     | mean x: 1764213675.8118813
[2025-11-27 01:47:36] 2025-11-27 06:46:57,884 | INFO     | mean y: 3932151.0222772276
[2025-11-27 01:47:36] 2025-11-27 06:46:57,884 | INFO     | intersect: -15385580007.799984
[2025-11-27 01:47:36] 2025-11-27 06:46:57,884 | INFO     | chi2: 4.194278939096563
[2025-11-27 01:47:36] 2025-11-27 06:46:57,885 | INFO     | current chi2=4.194278939096563 (change=38.146641431548765 %)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,885 | INFO     | sum of square deviations: 19696746976.210564
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | sum of deviations: 145463188113.36826
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | mean x: 1764213828.3157895
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | mean y: 3938833.528822055
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | intersect: -13025023171.743261
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | chi2: 4.147290983571132
[2025-11-27 01:47:36] 2025-11-27 06:46:57,889 | INFO     | current chi2=4.147290983571132 (change=1.120286852823193 %)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,890 | INFO     | left removable region: 20
[2025-11-27 01:47:36] 2025-11-27 06:46:57,890 | INFO     | sum of square deviations: 16747520895.164059
[2025-11-27 01:47:36] 2025-11-27 06:46:57,893 | INFO     | sum of deviations: 352336213602.2596
[2025-11-27 01:47:36] 2025-11-27 06:46:57,893 | INFO     | mean x: 1764213797.8306878
[2025-11-27 01:47:36] 2025-11-27 06:46:57,893 | INFO     | mean y: 3997814.925925926
[2025-11-27 01:47:36] 2025-11-27 06:46:57,894 | INFO     | intersect: -37111728948.67025
[2025-11-27 01:47:36] 2025-11-27 06:46:57,894 | INFO     | chi2: 0.04613556581961037
[2025-11-27 01:47:36] 2025-11-27 06:46:57,894 | INFO     | current memory leak: 21.04 B/s (using 378 data points, chi2=0.05)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | could have reported an average CPU frequency of 2419 MHz (17 samples)
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | ..............................
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . Timing measurements:
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . get job = 0 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . initial setup = 2 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . payload setup = 7 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . stage-in = 0 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . payload execution = 24927 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,895 | INFO     | . stage-out = 3 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,896 | INFO     | . log creation = 0 s
[2025-11-27 01:47:36] 2025-11-27 06:46:57,896 | INFO     | ..............................
[2025-11-27 01:47:36] 2025-11-27 06:46:58,273 | INFO     | time since job start (24968s) is within the limit (172800.0s)
[2025-11-27 01:47:36] 2025-11-27 06:46:58,286 | INFO     | 
[2025-11-27 01:47:36] 2025-11-27 06:46:58,286 | INFO     | job summary report
[2025-11-27 01:47:36] 2025-11-27 06:46:58,288 | INFO     | --------------------------------------------------
[2025-11-27 01:47:36] 2025-11-27 06:46:58,288 | INFO     | PanDA job id: 6897999056
[2025-11-27 01:47:36] 2025-11-27 06:46:58,288 | INFO     | task id: 47556161
[2025-11-27 01:47:36] 2025-11-27 06:46:58,288 | INFO     | errors: (none)
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | pilot state: finished 
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | transexitcode: 0
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | exeerrorcode: 0
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | exeerrordiag: 
[2025-11-27 01:47:36] 2025-11-27 06:46:58,289 | INFO     | exitcode: 0
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | exitmsg: OK
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | cpuconsumptiontime: 288627 s
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | nevents: 1000
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | neventsw: 0
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | pid: 17374
[2025-11-27 01:47:36] 2025-11-27 06:46:58,290 | INFO     | pgrp: 17374
[2025-11-27 01:47:36] 2025-11-27 06:46:58,291 | INFO     | corecount: 12
[2025-11-27 01:47:36] 2025-11-27 06:46:58,291 | INFO     | event service: False
[2025-11-27 01:47:36] 2025-11-27 06:46:58,291 | INFO     | sizes: {0: 2283436, 1: 2284292, 6: 2284554, 12: 2284582, 24938: 2321423, 24943: 2330417, 24945: 2330601, 24951: 2330911}
[2025-11-27 01:47:36] 2025-11-27 06:46:58,291 | INFO     | --------------------------------------------------
[2025-11-27 01:47:36] 2025-11-27 06:46:58,291 | INFO     | 
[2025-11-27 01:47:36] 2025-11-27 06:46:58,292 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 01:47:36] 2025-11-27 06:46:58,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,322 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:47:36] 2025-11-27 06:46:58,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,322 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:47:36] 2025-11-27 06:46:58,322 | INFO     | job 6897999056 has completed (purged errors)
[2025-11-27 01:47:36] 2025-11-27 06:46:58,322 | INFO     | overall cleanup function is called
[2025-11-27 01:47:36] 2025-11-27 06:46:59,339 | INFO     | --- collectZombieJob: --- 10, [17374]
[2025-11-27 01:47:36] 2025-11-27 06:46:59,339 | INFO     | zombie collector waiting for pid 17374
[2025-11-27 01:47:36] 2025-11-27 06:46:59,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:47:36] 2025-11-27 06:46:59,339 | INFO     | collected zombie processes
[2025-11-27 01:47:36] 2025-11-27 06:46:59,340 | INFO     | will attempt to kill all subprocesses of pid=17374
[2025-11-27 01:47:36] 2025-11-27 06:46:59,431 | INFO     | process IDs to be killed: [17374] (in reverse order)
[2025-11-27 01:47:36] 2025-11-27 06:46:59,484 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:47:36] 2025-11-27 06:46:59,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:47:36] 2025-11-27 06:46:59,488 | INFO     | did not find any defunct processes belonging to 17374
[2025-11-27 01:47:36] 2025-11-27 06:46:59,490 | INFO     | did not find any defunct processes belonging to 17374
[2025-11-27 01:47:36] 2025-11-27 06:46:59,492 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:47:36] 2025-11-27 06:46:59,493 | INFO     | ready for new job
[2025-11-27 01:47:36] 2025-11-27 06:46:59,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:47:36] 2025-11-27 06:46:59,495 | INFO     | ***************************************
[2025-11-27 01:47:36] 2025-11-27 06:46:59,495 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:47:36] 2025-11-27 06:46:59,495 | INFO     | ***************************************
[2025-11-27 01:47:36] 2025-11-27 06:46:59,495 | INFO     | 
[2025-11-27 01:47:36] 2025-11-27 06:46:59,496 | INFO     | architecture information:
[2025-11-27 01:47:36] 2025-11-27 06:46:59,497 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:47:36] 2025-11-27 06:46:59,514 | INFO     | cat /etc/os-release:
[2025-11-27 01:47:36] NAME="CentOS Linux"
[2025-11-27 01:47:36] VERSION="7 (Core)"
[2025-11-27 01:47:36] ID="centos"
[2025-11-27 01:47:36] ID_LIKE="rhel fedora"
[2025-11-27 01:47:36] VERSION_ID="7"
[2025-11-27 01:47:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:47:36] ANSI_COLOR="0;31"
[2025-11-27 01:47:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:47:36] HOME_URL="https://www.centos.org/"
[2025-11-27 01:47:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:47:36] 
[2025-11-27 01:47:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:47:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:47:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:47:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:47:36] 
[2025-11-27 01:47:36] 2025-11-27 06:46:59,515 | INFO     | ***************************************
[2025-11-27 01:47:36] 2025-11-27 06:47:00,018 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 01:47:36] 2025-11-27 06:47:00,036 | INFO     | sufficient remaining disk space (28277997568 B)
[2025-11-27 01:47:36] 2025-11-27 06:47:00,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:47:36] 2025-11-27 06:47:00,036 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:47:36] 2025-11-27 06:47:00,036 | INFO     | update_server=False
[2025-11-27 01:47:36] 2025-11-27 06:47:00,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:47:36] 2025-11-27 06:47:00,037 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 01:47:36] 2025-11-27 06:47:00,037 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:47:36] 2025-11-27 06:47:00,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:47:36] 2025-11-27 06:47:00,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:47:36] 2025-11-27 06:47:00,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:47:36] 2025-11-27 06:47:00,118 | INFO     | all data control threads have been joined
[2025-11-27 01:47:36] 2025-11-27 06:47:00,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:47:36] 2025-11-27 06:47:00,585 | INFO     | aborting loop
[2025-11-27 01:47:36] 2025-11-27 06:47:00,788 | INFO     | all job control threads have been joined
[2025-11-27 01:47:36] 2025-11-27 06:47:00,972 | INFO     | all payload control threads have been joined
[2025-11-27 01:47:36] 2025-11-27 06:47:01,042 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,124 | INFO     | [data] control thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,387 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,590 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,701 | INFO     | [job] validate thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,793 | INFO     | [job] control thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,947 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:01,977 | INFO     | [payload] control thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,066 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,073 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,341 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,427 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:47:36] 2025-11-27 06:47:02,497 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,576 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:02,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:47:36] 2025-11-27 06:47:03,991 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:06,433 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:47:36] 2025-11-27 06:47:30,646 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:47:36] 2025-11-27 06:47:31,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140580128724800)>', '<ExcThread(monitor, started 140579103041280)>']
[2025-11-27 01:47:36] 2025-11-27 06:47:32,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:47:36] 2025-11-27 06:47:32,182 | INFO     | [monitor] control thread has ended
[2025-11-27 01:47:36] 2025-11-27 06:47:36,659 | INFO     | all workflow threads have been joined
[2025-11-27 01:47:36] 2025-11-27 06:47:36,659 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:47:36] 2025-11-27 06:47:36,660 | INFO     | traces error code: 0
[2025-11-27 01:47:36] 2025-11-27 06:47:36,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:47:36] 2025-11-27 06:47:36,757 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:47:36] 2025-11-27 06:47:36,761 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:47:36] 2025-11-27 06:47:36,764 [wrapper] pilotpid: 10089
[2025-11-27 01:47:36] 2025-11-27 06:47:36,768 [wrapper] Pilot exit status: 0
[2025-11-27 01:47:36] 2025-11-27 06:47:36,782 [wrapper] pandaids: 6897999056
[2025-11-27 01:47:36] 2025-11-27 06:47:36,818 [wrapper] cleanup supervisor_pilot  6507 10090
[2025-11-27 01:47:36] 2025-11-27 06:47:36,823 [wrapper] Test setup, not cleaning
[2025-11-27 01:47:36] 2025-11-27 06:47:36,827 [wrapper] apfmon messages muted
[2025-11-27 01:47:36] 2025-11-27 06:47:36,830 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:47:36] 2025-11-27 06:47:36,834 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:47:36]  *** Error codes and diagnostics ***
[2025-11-27 01:47:36]     "exeErrorCode": 0,
[2025-11-27 01:47:36]     "exeErrorDiag": "",
[2025-11-27 01:47:36]     "pilotErrorCode": 0,
[2025-11-27 01:47:36]     "pilotErrorDiag": "",
[2025-11-27 01:47:36]  *** Listing of results directory ***
[2025-11-27 01:47:36] total 1314480
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 01:47:36] -rwx------ 1 boincer umatlas     36292 Nov 25 21:35 runpilot2-wrapper.sh
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 21:35 queuedata.json
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:47:36] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:50 run_atlas
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:50 job.xml
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas 413158160 Nov 26 18:50 EVNT.47483658._002383.pool.root.1
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:50 start_atlas.sh
[2025-11-27 01:47:36] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:50 shared
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 18:50 input.tar.gz
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:50 boinc_lockfile
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 18:50 pandaJob.out
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas    991538 Nov 26 18:50 agis_schedconf.cvmfs.json
[2025-11-27 01:47:36] drwx------ 5 boincer umatlas      4096 Nov 26 18:50 pilot3
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas       532 Nov 27 01:37 boinc_task_state.xml
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas      5871 Nov 27 01:39 init_data.xml
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas        95 Nov 27 01:46 pilot_heartbeat.json
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas 917667405 Nov 27 01:46 HITS.47556161._003655.pool.root.1
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas      1060 Nov 27 01:46 memory_monitor_summary.json
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas   1516240 Nov 27 01:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas   2158708 Nov 27 01:46 log.47556161._003655.job.log.tgz.1
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas      8664 Nov 27 01:46 heartbeat.json
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 01:47 boinc_mmap_file
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas        29 Nov 27 01:47 wrapper_checkpoint.txt
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas      4552 Nov 27 01:47 pilotlog.txt
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas   3483146 Nov 27 01:47 log.47556161._003655.job.log.1
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas       353 Nov 27 01:47 output.list
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas       620 Nov 27 01:47 runtime_log
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas   5662720 Nov 27 01:47 result.tar.gz
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas      8820 Nov 27 01:47 runtime_log.err
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas       669 Nov 27 01:47 gy4MDmwYKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmomJKDmdpsXSm.diag
[2025-11-27 01:47:36] -rw-r--r-- 1 boincer umatlas     21239 Nov 27 01:47 stderr.txt
[2025-11-27 01:47:36] HITS file was successfully produced:
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas 917667405 Nov 27 01:46 shared/HITS.pool.root.1
[2025-11-27 01:47:36]  *** Contents of shared directory: ***
[2025-11-27 01:47:36] total 1305768
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas 413158160 Nov 26 18:50 ATLAS.root_0
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:50 start_atlas.sh
[2025-11-27 01:47:36] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 18:50 input.tar.gz
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas 917667405 Nov 27 01:46 HITS.pool.root.1
[2025-11-27 01:47:36] -rw------- 1 boincer umatlas   5662720 Nov 27 01:47 result.tar.gz
01:47:38 (6420): run_atlas exited; CPU time 285415.414004
01:47:38 (6420): called boinc_finish(0)

</stderr_txt>
]]>

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