Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:52:52 (4172966): wrapper (7.7.26015): starting
19:52:52 (4172966): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 19:52:52] Arguments: --nthreads 10
[2025-11-26 19:52:52] Threads: 10
[2025-11-26 19:52:52] Checking for CVMFS
[2025-11-26 19:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:52:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:52:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:52:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:52:58] 2.13.3.0 9158 30750 309240 153341 2 364 17968777 32935937 24780 16776704 0 178027290 99.781 102392269 33685 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 0
[2025-11-26 19:52:58] CVMFS is ok
[2025-11-26 19:52:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:52:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:52:58] Further information can be found at the LHC@home message board.
[2025-11-26 19:52:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:52:58] Checking for apptainer binary...
[2025-11-26 19:52:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:52:58] Running /usr/bin/apptainer --version
[2025-11-26 19:52:58] apptainer version 1.4.4-1.el9
[2025-11-26 19:52:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:52:58] c-8-16.aglt2.org
[2025-11-26 19:52:58] apptainer works
[2025-11-26 19:52:58] Set ATHENA_PROC_NUMBER=10
[2025-11-26 19:52:58] Set ATHENA_CORE_NUMBER=10
[2025-11-26 19:52:58] Starting ATLAS job with PandaID=6897998888
[2025-11-26 19:52:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:19:06]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:19:06] 2025-11-27 15:18:14,161 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:19:06] 2025-11-27 15:18:14,161 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:19:06] 2025-11-27 15:18:14,182 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:19:06] 2025-11-27 15:18:14,184 | INFO     | sum of square deviations: 190439775114.37778
[2025-11-27 10:19:06] 2025-11-27 15:18:14,208 | INFO     | sum of deviations: 1757704922562.0022
[2025-11-27 10:19:06] 2025-11-27 15:18:14,208 | INFO     | mean x: 1764230750.0270588
[2025-11-27 10:19:06] 2025-11-27 15:18:14,208 | INFO     | mean y: 3265757.8694117647
[2025-11-27 10:19:06] 2025-11-27 15:18:14,208 | INFO     | intersect: -16280081940.873465
[2025-11-27 10:19:06] 2025-11-27 15:18:14,210 | INFO     | chi2: 10.108214579286988
[2025-11-27 10:19:06] 2025-11-27 15:18:14,211 | INFO     | sum of square deviations: 187099891919.3089
[2025-11-27 10:19:06] 2025-11-27 15:18:14,241 | INFO     | sum of deviations: 2094801368129.6313
[2025-11-27 10:19:06] 2025-11-27 15:18:14,242 | INFO     | mean x: 1764230597.547929
[2025-11-27 10:19:06] 2025-11-27 15:18:14,242 | INFO     | mean y: 3281147.2189349113
[2025-11-27 10:19:06] 2025-11-27 15:18:14,242 | INFO     | intersect: -19749336727.266098
[2025-11-27 10:19:06] 2025-11-27 15:18:14,243 | INFO     | chi2: 6.606472864912156
[2025-11-27 10:19:06] 2025-11-27 15:18:14,244 | INFO     | current chi2=6.606472864912156 (change=34.64253441503254 %)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,245 | INFO     | sum of square deviations: 183799260491.1322
[2025-11-27 10:19:06] 2025-11-27 15:18:14,267 | INFO     | sum of deviations: 2355587451059.3574
[2025-11-27 10:19:06] 2025-11-27 15:18:14,268 | INFO     | mean x: 1764230445.067857
[2025-11-27 10:19:06] 2025-11-27 15:18:14,268 | INFO     | mean y: 3293185.3095238097
[2025-11-27 10:19:06] 2025-11-27 15:18:14,268 | INFO     | intersect: -22607239012.012424
[2025-11-27 10:19:06] 2025-11-27 15:18:14,269 | INFO     | chi2: 4.285957972099719
[2025-11-27 10:19:06] 2025-11-27 15:18:14,269 | INFO     | current chi2=4.285957972099719 (change=35.12486829601612 %)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,270 | INFO     | sum of square deviations: 180537495110.96533
[2025-11-27 10:19:06] 2025-11-27 15:18:14,292 | INFO     | sum of deviations: 2490311329644.7793
[2025-11-27 10:19:06] 2025-11-27 15:18:14,293 | INFO     | mean x: 1764230292.5832336
[2025-11-27 10:19:06] 2025-11-27 15:18:14,293 | INFO     | mean y: 3299476.3844311377
[2025-11-27 10:19:06] 2025-11-27 15:18:14,293 | INFO     | intersect: -24332269614.24766
[2025-11-27 10:19:06] 2025-11-27 15:18:14,294 | INFO     | chi2: 3.5044250869346296
[2025-11-27 10:19:06] 2025-11-27 15:18:14,294 | INFO     | current chi2=3.5044250869346296 (change=18.234730490887458 %)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,295 | INFO     | right removable region: 834
[2025-11-27 10:19:06] 2025-11-27 15:18:14,296 | INFO     | sum of square deviations: 187098063139.30902
[2025-11-27 10:19:06] 2025-11-27 15:18:14,318 | INFO     | sum of deviations: 1423815482798.7886
[2025-11-27 10:19:06] 2025-11-27 15:18:14,319 | INFO     | mean x: 1764230902.547929
[2025-11-27 10:19:06] 2025-11-27 15:18:14,319 | INFO     | mean y: 3280987.5360946744
[2025-11-27 10:19:06] 2025-11-27 15:18:14,319 | INFO     | intersect: -13422508847.655777
[2025-11-27 10:19:06] 2025-11-27 15:18:14,320 | INFO     | chi2: 7.046673777849405
[2025-11-27 10:19:06] 2025-11-27 15:18:14,320 | INFO     | current chi2=7.046673777849405 (change=30.287651468253046 %)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,322 | INFO     | sum of square deviations: 183796169601.25717
[2025-11-27 10:19:06] 2025-11-27 15:18:14,341 | INFO     | sum of deviations: 1338911496395.771
[2025-11-27 10:19:06] 2025-11-27 15:18:14,341 | INFO     | mean x: 1764231055.057143
[2025-11-27 10:19:06] 2025-11-27 15:18:14,341 | INFO     | mean y: 3284908.088095238
[2025-11-27 10:19:06] 2025-11-27 15:18:14,342 | INFO     | intersect: -12848719826.49965
[2025-11-27 10:19:06] 2025-11-27 15:18:14,343 | INFO     | chi2: 6.9535688270539575
[2025-11-27 10:19:06] 2025-11-27 15:18:14,343 | INFO     | current chi2=6.9535688270539575 (change=1.3212609768897532 %)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,343 | INFO     | left removable region: 20
[2025-11-27 10:19:06] 2025-11-27 15:18:14,344 | INFO     | sum of square deviations: 167254565495.31134
[2025-11-27 10:19:06] 2025-11-27 15:18:14,363 | INFO     | sum of deviations: 1969957789058.008
[2025-11-27 10:19:06] 2025-11-27 15:18:14,364 | INFO     | mean x: 1764230872.1388206
[2025-11-27 10:19:06] 2025-11-27 15:18:14,364 | INFO     | mean y: 3325193.654791155
[2025-11-27 10:19:06] 2025-11-27 15:18:14,364 | INFO     | intersect: -20776139558.019802
[2025-11-27 10:19:06] 2025-11-27 15:18:14,365 | INFO     | chi2: 0.23134647134173844
[2025-11-27 10:19:06] 2025-11-27 15:18:14,365 | INFO     | current memory leak: 11.78 B/s (using 814 data points, chi2=0.23)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,366 | INFO     | could have reported an average CPU frequency of 2600 MHz (32 samples)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | ..............................
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . Timing measurements:
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . get job = 0 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . initial setup = 4 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . payload setup = 13 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . stage-in = 0 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . payload execution = 51822 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,367 | INFO     | . stage-out = 4 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,368 | INFO     | . log creation = 0 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,368 | INFO     | ..............................
[2025-11-27 10:19:06] 2025-11-27 15:18:14,481 | INFO     | 
[2025-11-27 10:19:06] 2025-11-27 15:18:14,481 | INFO     | job summary report
[2025-11-27 10:19:06] 2025-11-27 15:18:14,481 | INFO     | --------------------------------------------------
[2025-11-27 10:19:06] 2025-11-27 15:18:14,481 | INFO     | PanDA job id: 6897998888
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | task id: 47556173
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | errors: (none)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | pilot state: finished 
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | transexitcode: 0
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | exeerrorcode: 0
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | exeerrordiag: 
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | exitcode: 0
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | exitmsg: OK
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | cpuconsumptiontime: 294230 s
[2025-11-27 10:19:06] 2025-11-27 15:18:14,482 | INFO     | nevents: 1000
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | neventsw: 0
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | pid: 4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | pgrp: 4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | corecount: 10
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | event service: False
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | sizes: {0: 2284037, 1: 2284292, 10: 2284554, 12: 2284582, 51840: 2333700, 51846: 2342694, 51849: 2342878, 51865: 2343124}
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | --------------------------------------------------
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | 
[2025-11-27 10:19:06] 2025-11-27 15:18:14,483 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,518 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,519 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:19:06] 2025-11-27 15:18:14,520 | INFO     | job 6897998888 has completed (purged errors)
[2025-11-27 10:19:06] 2025-11-27 15:18:14,520 | INFO     | overall cleanup function is called
[2025-11-27 10:19:06] 2025-11-27 15:18:15,539 | INFO     | --- collectZombieJob: --- 10, [4185161]
[2025-11-27 10:19:06] 2025-11-27 15:18:15,540 | INFO     | zombie collector waiting for pid 4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:15,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:19:06] 2025-11-27 15:18:15,540 | INFO     | collected zombie processes
[2025-11-27 10:19:06] 2025-11-27 15:18:15,540 | INFO     | will attempt to kill all subprocesses of pid=4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:16,165 | INFO     | process IDs to be killed: [4185161] (in reverse order)
[2025-11-27 10:19:06] 2025-11-27 15:18:16,378 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:19:06] 2025-11-27 15:18:16,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:19:06] 2025-11-27 15:18:16,397 | INFO     | did not find any defunct processes belonging to 4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:16,530 | INFO     | did not find any defunct processes belonging to 4185161
[2025-11-27 10:19:06] 2025-11-27 15:18:16,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:19:06] 2025-11-27 15:18:16,543 | INFO     | ready for new job
[2025-11-27 10:19:06] 2025-11-27 15:18:16,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:19:06] 2025-11-27 15:18:16,559 | INFO     | ***************************************
[2025-11-27 10:19:06] 2025-11-27 15:18:16,560 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:19:06] 2025-11-27 15:18:16,561 | INFO     | ***************************************
[2025-11-27 10:19:06] 2025-11-27 15:18:16,561 | INFO     | 
[2025-11-27 10:19:06] 2025-11-27 15:18:16,568 | INFO     | architecture information:
[2025-11-27 10:19:06] 2025-11-27 15:18:16,570 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:19:06] 2025-11-27 15:18:16,611 | INFO     | cat /etc/os-release:
[2025-11-27 10:19:06] NAME="CentOS Linux"
[2025-11-27 10:19:06] VERSION="7 (Core)"
[2025-11-27 10:19:06] ID="centos"
[2025-11-27 10:19:06] ID_LIKE="rhel fedora"
[2025-11-27 10:19:06] VERSION_ID="7"
[2025-11-27 10:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:19:06] ANSI_COLOR="0;31"
[2025-11-27 10:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:19:06] HOME_URL="https://www.centos.org/"
[2025-11-27 10:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:19:06] 
[2025-11-27 10:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:19:06] 
[2025-11-27 10:19:06] 2025-11-27 15:18:16,621 | INFO     | ***************************************
[2025-11-27 10:19:06] 2025-11-27 15:18:17,127 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 10:19:06] 2025-11-27 15:18:17,251 | INFO     | sufficient remaining disk space (72193409024 B)
[2025-11-27 10:19:06] 2025-11-27 15:18:17,258 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:19:06] 2025-11-27 15:18:17,258 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:19:06] 2025-11-27 15:18:17,258 | INFO     | update_server=False
[2025-11-27 10:19:06] 2025-11-27 15:18:17,258 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:19:06] 2025-11-27 15:18:17,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:19:06] 2025-11-27 15:18:17,259 | INFO     | aborting loop
[2025-11-27 10:19:06] 2025-11-27 15:18:17,312 | INFO     | all data control threads have been joined
[2025-11-27 10:19:06] 2025-11-27 15:18:17,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:19:06] 2025-11-27 15:18:17,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:19:06] 2025-11-27 15:18:18,234 | INFO     | all job control threads have been joined
[2025-11-27 10:19:06] 2025-11-27 15:18:18,264 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:18,277 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:18,317 | INFO     | [data] control thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:18,438 | INFO     | all payload control threads have been joined
[2025-11-27 10:19:06] 2025-11-27 15:18:18,654 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:18,714 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:18,739 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,214 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,241 | INFO     | [job] control thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,247 | INFO     | [job] validate thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,271 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,316 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,445 | INFO     | [payload] control thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:19:06] 2025-11-27 15:18:19,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:19,866 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:20,517 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:21,923 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:19:06] 2025-11-27 15:18:46,567 | INFO     | PID=4177333 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:19:06] 2025-11-27 15:18:46,567 | INFO     | .. there are 41 such processes running
[2025-11-27 10:19:06] 2025-11-27 15:18:46,568 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:19:06] 2025-11-27 15:18:46,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:19:06] 2025-11-27 15:18:46,568 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:19:06] 2025-11-27 15:19:00,465 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:19:06] 2025-11-27 15:19:00,661 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140170662446912)>', '<ExcThread(monitor, started 140170317772544)>']
[2025-11-27 10:19:06] 2025-11-27 15:19:01,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:19:06] 2025-11-27 15:19:01,691 | INFO     | [monitor] control thread has ended
[2025-11-27 10:19:06] 2025-11-27 15:19:05,711 | INFO     | all workflow threads have been joined
[2025-11-27 10:19:06] 2025-11-27 15:19:05,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:19:06] 2025-11-27 15:19:05,711 | INFO     | traces error code: 0
[2025-11-27 10:19:06] 2025-11-27 15:19:05,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:19:06] 2025-11-27 15:19:06,002 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:19:06] 2025-11-27 15:19:06,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:19:06] 2025-11-27 15:19:06,062 [wrapper] pilotpid: 4177333
[2025-11-27 10:19:06] 2025-11-27 15:19:06,069 [wrapper] Pilot exit status: 0
[2025-11-27 10:19:06] 2025-11-27 15:19:06,226 [wrapper] pandaids: 6897998888
[2025-11-27 10:19:06] 2025-11-27 15:19:06,450 [wrapper] cleanup supervisor_pilot 3030068 4177334
[2025-11-27 10:19:06] 2025-11-27 15:19:06,479 [wrapper] Test setup, not cleaning
[2025-11-27 10:19:06] 2025-11-27 15:19:06,486 [wrapper] apfmon messages muted
[2025-11-27 10:19:06] 2025-11-27 15:19:06,501 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:19:06] 2025-11-27 15:19:06,514 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:19:06]  *** Error codes and diagnostics ***
[2025-11-27 10:19:06]     "exeErrorCode": 0,
[2025-11-27 10:19:06]     "exeErrorDiag": "",
[2025-11-27 10:19:06]     "pilotErrorCode": 0,
[2025-11-27 10:19:06]     "pilotErrorDiag": "",
[2025-11-27 10:19:06]  *** Listing of results directory ***
[2025-11-27 10:19:06] total 1313316
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 10:19:06] -rwx------. 1 boincer umatlas     36292 Nov 25 21:35 runpilot2-wrapper.sh
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:35 queuedata.json
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:19:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:52 run_atlas
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:52 job.xml
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas 407791342 Nov 26 19:52 EVNT.47483658._003151.pool.root.1
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:52 start_atlas.sh
[2025-11-27 10:19:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:52 shared
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 19:52 input.tar.gz
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:52 boinc_lockfile
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 19:52 pandaJob.out
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas        57 Nov 26 19:52 setup.sh.local
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas    991546 Nov 26 19:53 agis_schedconf.cvmfs.json
[2025-11-27 10:19:06] drwx------. 5 boincer umatlas      4096 Nov 26 19:53 pilot3
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:01 boinc_task_state.xml
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas      6660 Nov 27 10:13 init_data.xml
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas 915266837 Nov 27 10:16 HITS.47556173._001079.pool.root.1
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas      1057 Nov 27 10:17 memory_monitor_summary.json
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas   2254604 Nov 27 10:17 log.47556173._001079.job.log.tgz.1
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas      8634 Nov 27 10:18 heartbeat.json
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas        95 Nov 27 10:18 pilot_heartbeat.json
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:19 boinc_mmap_file
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:19 wrapper_checkpoint.txt
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas      4824 Nov 27 10:19 pilotlog.txt
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas   6673117 Nov 27 10:19 log.47556173._001079.job.log.1
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas       353 Nov 27 10:19 output.list
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:19 runtime_log
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas   8949760 Nov 27 10:19 result.tar.gz
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas       658 Nov 27 10:19 x4nLDm2YKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmekMKDmCBjdDo.diag
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas      9335 Nov 27 10:19 runtime_log.err
[2025-11-27 10:19:06] -rw-r--r--. 1 boincer umatlas     21146 Nov 27 10:19 stderr.txt
[2025-11-27 10:19:06] HITS file was successfully produced:
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas 915266837 Nov 27 10:16 shared/HITS.pool.root.1
[2025-11-27 10:19:06]  *** Contents of shared directory: ***
[2025-11-27 10:19:06] total 1301392
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas 407791342 Nov 26 19:52 ATLAS.root_0
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:52 start_atlas.sh
[2025-11-27 10:19:06] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 19:52 input.tar.gz
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas 915266837 Nov 27 10:16 HITS.pool.root.1
[2025-11-27 10:19:06] -rw-------. 1 boincer umatlas   8949760 Nov 27 10:19 result.tar.gz
10:19:08 (4172966): run_atlas exited; CPU time 295720.290959
10:19:08 (4172966): called boinc_finish(0)

</stderr_txt>
]]>

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