Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:45 (2142029): wrapper (7.7.26015): starting
19:00:45 (2142029): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:00:45] Arguments: --nthreads 8
[2025-11-26 19:00:45] Threads: 8
[2025-11-26 19:00:45] Checking for CVMFS
[2025-11-26 19:00:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:00:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:00:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:00:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:00:46] 2.13.3.0 10121 30695 436928 153340 2 488 21899275 32935937 62232 16776704 0 347287713 99.785 180775047 27413 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:00:46] CVMFS is ok
[2025-11-26 19:00:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:00:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:00:46] Further information can be found at the LHC@home message board.
[2025-11-26 19:00:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:00:46] Checking for apptainer binary...
[2025-11-26 19:00:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:00:46] Running /usr/bin/apptainer --version
[2025-11-26 19:00:46] apptainer version 1.4.4-1.el9
[2025-11-26 19:01:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:01:06] lc-10-11.aglt2.org
[2025-11-26 19:01:06] apptainer works
[2025-11-26 19:01:06] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:01:06] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:01:06] Starting ATLAS job with PandaID=6897881293
[2025-11-26 19:01:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:05:50]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:05:50] 2025-11-27 20:04:43,673 | INFO     | monitor loop #3687: job 0:6897881293 is in state 'finished'
[2025-11-27 15:05:50] 2025-11-27 20:04:43,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:05:50] 2025-11-27 20:04:44,902 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 15:05:50] 2025-11-27 20:04:44,908 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2711.4627499999997
[2025-11-27 15:05:50] 2025-11-27 20:04:44,926 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6897881293/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:05:50] 2025-11-27 20:04:44,927 | INFO     | extracted standard info from prmon json
[2025-11-27 15:05:50] 2025-11-27 20:04:44,927 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:05:50] 2025-11-27 20:04:44,927 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:05:50] 2025-11-27 20:04:44,946 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:05:50] 2025-11-27 20:04:44,948 | INFO     | sum of square deviations: 513404603164.7073
[2025-11-27 15:05:50] 2025-11-27 20:04:44,983 | INFO     | sum of deviations: 2667083967598.714
[2025-11-27 15:05:50] 2025-11-27 20:04:44,985 | INFO     | mean x: 1764237781.1403213
[2025-11-27 15:05:50] 2025-11-27 20:04:44,985 | INFO     | mean y: 2927325.760777684
[2025-11-27 15:05:50] 2025-11-27 20:04:44,985 | INFO     | intersect: -9162106006.832329
[2025-11-27 15:05:50] 2025-11-27 20:04:44,987 | INFO     | chi2: 9.91092460950124
[2025-11-27 15:05:50] 2025-11-27 20:04:44,989 | INFO     | sum of square deviations: 506923765998.99615
[2025-11-27 15:05:50] 2025-11-27 20:04:45,016 | INFO     | sum of deviations: 3073822123949.54
[2025-11-27 15:05:50] 2025-11-27 20:04:45,016 | INFO     | mean x: 1764237628.6528013
[2025-11-27 15:05:50] 2025-11-27 20:04:45,016 | INFO     | mean y: 2936894.5025466895
[2025-11-27 15:05:50] 2025-11-27 20:04:45,016 | INFO     | intersect: -10694830735.646387
[2025-11-27 15:05:50] 2025-11-27 20:04:45,018 | INFO     | chi2: 6.66820254296254
[2025-11-27 15:05:50] 2025-11-27 20:04:45,018 | INFO     | current chi2=6.66820254296254 (change=32.71866343761733 %)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,019 | INFO     | sum of square deviations: 500497504993.9018
[2025-11-27 15:05:50] 2025-11-27 20:04:45,062 | INFO     | sum of deviations: 3498430894345.97
[2025-11-27 15:05:50] 2025-11-27 20:04:45,062 | INFO     | mean x: 1764237476.1628304
[2025-11-27 15:05:50] 2025-11-27 20:04:45,062 | INFO     | mean y: 2946965.696504689
[2025-11-27 15:05:50] 2025-11-27 20:04:45,062 | INFO     | intersect: -12328908498.090893
[2025-11-27 15:05:50] 2025-11-27 20:04:45,064 | INFO     | chi2: 3.0879754501659753
[2025-11-27 15:05:50] 2025-11-27 20:04:45,064 | INFO     | current chi2=3.0879754501659753 (change=53.69103697330024 %)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,070 | INFO     | sum of square deviations: 494125013496.7653
[2025-11-27 15:05:50] 2025-11-27 20:04:45,111 | INFO     | time since job start (72196s) is within the limit (172800.0s)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,161 | INFO     | sum of deviations: 3607368545420.749
[2025-11-27 15:05:50] 2025-11-27 20:04:45,161 | INFO     | mean x: 1764237323.6635275
[2025-11-27 15:05:50] 2025-11-27 20:04:45,161 | INFO     | mean y: 2949570.113869863
[2025-11-27 15:05:50] 2025-11-27 20:04:45,161 | INFO     | intersect: -12876896732.34974
[2025-11-27 15:05:50] 2025-11-27 20:04:45,163 | INFO     | chi2: 2.700796143067616
[2025-11-27 15:05:50] 2025-11-27 20:04:45,163 | INFO     | current chi2=2.700796143067616 (change=12.538289677061679 %)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,163 | INFO     | right removable region: 1167
[2025-11-27 15:05:50] 2025-11-27 20:04:45,164 | INFO     | sum of square deviations: 506921571762.6897
[2025-11-27 15:05:50] 2025-11-27 20:04:45,194 | INFO     | sum of deviations: 2321787110725.3354
[2025-11-27 15:05:50] 2025-11-27 20:04:45,195 | INFO     | mean x: 1764237933.6536503
[2025-11-27 15:05:50] 2025-11-27 20:04:45,195 | INFO     | mean y: 2935440.6086587436
[2025-11-27 15:05:50] 2025-11-27 20:04:45,195 | INFO     | intersect: -8077574687.153931
[2025-11-27 15:05:50] 2025-11-27 20:04:45,196 | INFO     | chi2: 7.513633905276441
[2025-11-27 15:05:50] 2025-11-27 20:04:45,197 | INFO     | current chi2=7.513633905276441 (change=24.18836585565997 %)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,197 | INFO     | left removable region: 10
[2025-11-27 15:05:50] 2025-11-27 20:04:45,198 | INFO     | sum of square deviations: 480294283020.1685
[2025-11-27 15:05:50] 2025-11-27 20:04:45,228 | INFO     | sum of deviations: 3176193668449.3965
[2025-11-27 15:05:50] 2025-11-27 20:04:45,228 | INFO     | mean x: 1764237598.190147
[2025-11-27 15:05:50] 2025-11-27 20:04:45,228 | INFO     | mean y: 2959893.543647364
[2025-11-27 15:05:50] 2025-11-27 20:04:45,228 | INFO     | intersect: -11663971167.504627
[2025-11-27 15:05:50] 2025-11-27 20:04:45,230 | INFO     | chi2: 0.2096003990512256
[2025-11-27 15:05:50] 2025-11-27 20:04:45,230 | INFO     | current memory leak: 6.61 B/s (using 1157 data points, chi2=0.21)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,231 | INFO     | could have reported an average CPU frequency of 2708 MHz (43 samples)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,231 | INFO     | ..............................
[2025-11-27 15:05:50] 2025-11-27 20:04:45,231 | INFO     | . Timing measurements:
[2025-11-27 15:05:50] 2025-11-27 20:04:45,231 | INFO     | . get job = 0 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . initial setup = 3 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . payload setup = 10 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . stage-in = 0 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . payload execution = 72122 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . stage-out = 9 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | . log creation = 3 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,232 | INFO     | ..............................
[2025-11-27 15:05:50] 2025-11-27 20:04:45,468 | INFO     | 
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | job summary report
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | --------------------------------------------------
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | PanDA job id: 6897881293
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | task id: 47556161
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | errors: (none)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | pilot state: finished 
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | transexitcode: 0
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | exeerrorcode: 0
[2025-11-27 15:05:50] 2025-11-27 20:04:45,469 | INFO     | exeerrordiag: 
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | exitcode: 0
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | exitmsg: OK
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | cpuconsumptiontime: 262638 s
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | nevents: 1000
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | neventsw: 0
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | pid: 2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | pgrp: 2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | corecount: 8
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | event service: False
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | sizes: {0: 2284093, 1: 2284292, 10: 2284554, 12: 2284582, 72137: 2341341, 72138: 2341340, 72147: 2350518, 72150: 2350574, 72176: 2350820}
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | --------------------------------------------------
[2025-11-27 15:05:50] 2025-11-27 20:04:45,470 | INFO     | 
[2025-11-27 15:05:50] 2025-11-27 20:04:45,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,526 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,527 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:05:50] 2025-11-27 20:04:45,528 | INFO     | job 6897881293 has completed (purged errors)
[2025-11-27 15:05:50] 2025-11-27 20:04:45,528 | INFO     | overall cleanup function is called
[2025-11-27 15:05:50] 2025-11-27 20:04:46,545 | INFO     | --- collectZombieJob: --- 10, [2155530]
[2025-11-27 15:05:50] 2025-11-27 20:04:46,546 | INFO     | zombie collector waiting for pid 2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:46,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:05:50] 2025-11-27 20:04:46,571 | INFO     | collected zombie processes
[2025-11-27 15:05:50] 2025-11-27 20:04:46,571 | INFO     | will attempt to kill all subprocesses of pid=2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:47,722 | INFO     | process IDs to be killed: [2155530] (in reverse order)
[2025-11-27 15:05:50] 2025-11-27 20:04:48,089 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:05:50] 2025-11-27 20:04:48,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:05:50] 2025-11-27 20:04:48,122 | INFO     | did not find any defunct processes belonging to 2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:48,154 | INFO     | did not find any defunct processes belonging to 2155530
[2025-11-27 15:05:50] 2025-11-27 20:04:48,155 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:05:50] 2025-11-27 20:04:48,155 | INFO     | ready for new job
[2025-11-27 15:05:50] 2025-11-27 20:04:48,155 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:05:50] 2025-11-27 20:04:48,161 | INFO     | ***************************************
[2025-11-27 15:05:50] 2025-11-27 20:04:48,161 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:05:50] 2025-11-27 20:04:48,161 | INFO     | ***************************************
[2025-11-27 15:05:50] 2025-11-27 20:04:48,161 | INFO     | 
[2025-11-27 15:05:50] 2025-11-27 20:04:48,178 | INFO     | architecture information:
[2025-11-27 15:05:50] 2025-11-27 20:04:48,183 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:05:50] 2025-11-27 20:04:48,263 | INFO     | cat /etc/os-release:
[2025-11-27 15:05:50] NAME="CentOS Linux"
[2025-11-27 15:05:50] VERSION="7 (Core)"
[2025-11-27 15:05:50] ID="centos"
[2025-11-27 15:05:50] ID_LIKE="rhel fedora"
[2025-11-27 15:05:50] VERSION_ID="7"
[2025-11-27 15:05:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:05:50] ANSI_COLOR="0;31"
[2025-11-27 15:05:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:05:50] HOME_URL="https://www.centos.org/"
[2025-11-27 15:05:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:05:50] 
[2025-11-27 15:05:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:05:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:05:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:05:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:05:50] 
[2025-11-27 15:05:50] 2025-11-27 20:04:48,263 | INFO     | ***************************************
[2025-11-27 15:05:50] 2025-11-27 20:04:48,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 15:05:50] 2025-11-27 20:04:48,877 | INFO     | sufficient remaining disk space (82485182464 B)
[2025-11-27 15:05:50] 2025-11-27 20:04:48,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:05:50] 2025-11-27 20:04:48,877 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:05:50] 2025-11-27 20:04:48,878 | INFO     | update_server=False
[2025-11-27 15:05:50] 2025-11-27 20:04:48,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:05:50] 2025-11-27 20:04:48,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:05:50] 2025-11-27 20:04:49,075 | INFO     | all payload control threads have been joined
[2025-11-27 15:05:50] 2025-11-27 20:04:49,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:05:50] 2025-11-27 20:04:49,320 | INFO     | all data control threads have been joined
[2025-11-27 15:05:50] 2025-11-27 20:04:49,522 | INFO     | all job control threads have been joined
[2025-11-27 15:05:50] 2025-11-27 20:04:49,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:05:50] 2025-11-27 20:04:49,733 | INFO     | aborting loop
[2025-11-27 15:05:50] 2025-11-27 20:04:49,883 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,020 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,081 | INFO     | [payload] control thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,326 | INFO     | [data] control thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:05:50] 2025-11-27 20:04:50,529 | INFO     | [job] control thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,738 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,825 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,837 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:50,837 | INFO     | [job] validate thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,101 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,129 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,207 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,345 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,353 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:51,506 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:04:52,887 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:05:50] 2025-11-27 20:05:19,588 | INFO     | PID=2147475 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:05:50] 2025-11-27 20:05:19,588 | INFO     | .. there are 99 such processes running
[2025-11-27 15:05:50] 2025-11-27 20:05:19,588 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:05:50] 2025-11-27 20:05:19,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:05:50] 2025-11-27 20:05:19,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:05:50] 2025-11-27 20:05:42,799 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:05:50] 2025-11-27 20:05:44,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995524282176)>', '<ExcThread(monitor, started 139994635159296)>']
[2025-11-27 15:05:50] 2025-11-27 20:05:44,743 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:05:50] 2025-11-27 20:05:44,744 | INFO     | [monitor] control thread has ended
[2025-11-27 15:05:50] 2025-11-27 20:05:49,734 | INFO     | all workflow threads have been joined
[2025-11-27 15:05:50] 2025-11-27 20:05:49,734 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:05:50] 2025-11-27 20:05:49,735 | INFO     | traces error code: 0
[2025-11-27 15:05:50] 2025-11-27 20:05:49,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:05:50] 2025-11-27 20:05:50,024 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:05:50] 2025-11-27 20:05:50,034 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:05:50] 2025-11-27 20:05:50,038 [wrapper] pilotpid: 2147475
[2025-11-27 15:05:50] 2025-11-27 20:05:50,041 [wrapper] Pilot exit status: 0
[2025-11-27 15:05:50] 2025-11-27 20:05:50,058 [wrapper] pandaids: 6897881293
[2025-11-27 15:05:50] 2025-11-27 20:05:50,240 [wrapper] cleanup supervisor_pilot 2873812 2147476
[2025-11-27 15:05:50] 2025-11-27 20:05:50,281 [wrapper] Test setup, not cleaning
[2025-11-27 15:05:50] 2025-11-27 20:05:50,284 [wrapper] apfmon messages muted
[2025-11-27 15:05:50] 2025-11-27 20:05:50,286 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:05:50] 2025-11-27 20:05:50,289 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:05:50]  *** Error codes and diagnostics ***
[2025-11-27 15:05:50]     "exeErrorCode": 0,
[2025-11-27 15:05:50]     "exeErrorDiag": "",
[2025-11-27 15:05:50]     "pilotErrorCode": 0,
[2025-11-27 15:05:50]     "pilotErrorDiag": "",
[2025-11-27 15:05:50]  *** Listing of results directory ***
[2025-11-27 15:05:50] total 1334288
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:07 queuedata.json
[2025-11-27 15:05:50] -rwx------. 1 boincer umatlas     36292 Nov 25 21:10 runpilot2-wrapper.sh
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:05:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:00 run_atlas
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:00 job.xml
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas 409296143 Nov 26 19:00 EVNT.47483658._002367.pool.root.1
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:00 start_atlas.sh
[2025-11-27 15:05:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:00 shared
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 19:00 input.tar.gz
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:00 boinc_lockfile
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 19:01 pandaJob.out
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas        57 Nov 26 19:01 setup.sh.local
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas    991538 Nov 26 19:01 agis_schedconf.cvmfs.json
[2025-11-27 15:05:50] drwx------. 5 boincer umatlas      4096 Nov 26 19:01 pilot3
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas       533 Nov 27 14:47 boinc_task_state.xml
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas      6888 Nov 27 15:00 init_data.xml
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas 932097096 Nov 27 15:03 HITS.47556161._003496.pool.root.1
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas      1059 Nov 27 15:04 memory_monitor_summary.json
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas   2212823 Nov 27 15:04 log.47556161._003496.job.log.tgz.1
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas        95 Nov 27 15:04 pilot_heartbeat.json
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas      7946 Nov 27 15:04 heartbeat.json
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:05 wrapper_checkpoint.txt
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas      4824 Nov 27 15:05 pilotlog.txt
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas   8286455 Nov 27 15:05 log.47556161._003496.job.log.1
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas       353 Nov 27 15:05 output.list
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:05 runtime_log
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas  10516480 Nov 27 15:05 result.tar.gz
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 15:05 runtime_log.err
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas       660 Nov 27 15:05 Bv4KDm79Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeiMKDm1nfb4n.diag
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:05 boinc_mmap_file
[2025-11-27 15:05:50] -rw-r--r--. 1 boincer umatlas     21353 Nov 27 15:05 stderr.txt
[2025-11-27 15:05:50] HITS file was successfully produced:
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas 932097096 Nov 27 15:03 shared/HITS.pool.root.1
[2025-11-27 15:05:50]  *** Contents of shared directory: ***
[2025-11-27 15:05:50] total 1320832
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas 409296143 Nov 26 19:00 ATLAS.root_0
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:00 start_atlas.sh
[2025-11-27 15:05:50] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 19:00 input.tar.gz
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas 932097096 Nov 27 15:03 HITS.pool.root.1
[2025-11-27 15:05:50] -rw-------. 1 boincer umatlas  10516480 Nov 27 15:05 result.tar.gz
15:05:52 (2142029): run_atlas exited; CPU time 266458.150933
15:05:52 (2142029): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN