Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
16:52:39 (740415): wrapper (7.7.26015): starting
16:52:39 (740415): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 16:52:39] Arguments: --nthreads 4
[2025-11-26 16:52:39] Threads: 4
[2025-11-26 16:52:39] Checking for CVMFS
[2025-11-26 16:52:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:52:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:52:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:52:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:52:39] 2.13.2.0 439692 4776 59256 153340 2 90 2861588 4096001 5106 130560 0 13313299 99.895 1249295 922 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 16:52:39] CVMFS is ok
[2025-11-26 16:52:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:52:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 16:52:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 16:52:39] Further information can be found at the LHC@home message board.
[2025-11-26 16:52:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:52:39] Checking for apptainer binary...
[2025-11-26 16:52:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:52:39] Running /usr/bin/apptainer --version
[2025-11-26 16:52:39] apptainer version 1.4.3
[2025-11-26 16:52:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:52:39] b650riptide
[2025-11-26 16:52:39] apptainer works
[2025-11-26 16:52:39] Set ATHENA_PROC_NUMBER=4
[2025-11-26 16:52:39] Set ATHENA_CORE_NUMBER=4
[2025-11-26 16:52:39] Starting ATLAS job with PandaID=6892548926
[2025-11-26 16:52:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:58:52]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:58:52] 2025-11-27 06:58:19,695 | INFO     | time since job start (25533s) is within the limit (172800.0s)
[2025-11-26 23:58:52] 2025-11-27 06:58:20,250 | INFO     | monitor loop #1931: job 0:6892548926 is in state 'finished'
[2025-11-26 23:58:52] 2025-11-27 06:58:20,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,469 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 23:58:52] 2025-11-27 06:58:21,472 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4534.355875
[2025-11-26 23:58:52] 2025-11-27 06:58:21,475 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6892548926/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,475 | INFO     | extracted standard info from prmon json
[2025-11-26 23:58:52] 2025-11-27 06:58:21,475 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:58:52] 2025-11-27 06:58:21,475 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:58:52] 2025-11-27 06:58:21,478 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:58:52] 2025-11-27 06:58:21,479 | INFO     | sum of square deviations: 22809618370.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | sum of deviations: 135770986619.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | mean x: 1764213935.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | mean y: 2243562.625298329
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | intersect: -10498987219.77899
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | chi2: 3.5746254738707766
[2025-11-26 23:58:52] 2025-11-27 06:58:21,481 | INFO     | sum of square deviations: 22002747427.5
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | sum of deviations: 202650762345.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | mean x: 1764213782.5
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | mean y: 2256141.415458937
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | intersect: -16246590469.273611
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | chi2: 1.8062970253060635
[2025-11-26 23:58:52] 2025-11-27 06:58:21,483 | INFO     | current chi2=1.8062970253060635 (change=49.46891531687883 %)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,484 | INFO     | sum of square deviations: 21215132660.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | sum of deviations: 198480640328.99988
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | mean x: 1764213630.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | mean y: 2255333.804400978
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | intersect: -16503050410.512789
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | chi2: 1.8056179759138309
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | current chi2=1.8056179759138309 (change=0.03759345128288425 %)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | right removable region: 408
[2025-11-26 23:58:52] 2025-11-27 06:58:21,486 | INFO     | sum of square deviations: 22002747427.5
[2025-11-26 23:58:52] 2025-11-27 06:58:21,488 | INFO     | sum of deviations: 65475398803.49991
[2025-11-26 23:58:52] 2025-11-27 06:58:21,488 | INFO     | mean x: 1764214087.5
[2025-11-26 23:58:52] 2025-11-27 06:58:21,488 | INFO     | mean y: 2256787.6787439613
[2025-11-26 23:58:52] 2025-11-27 06:58:21,488 | INFO     | intersect: -5247661266.165861
[2025-11-26 23:58:52] 2025-11-27 06:58:21,489 | INFO     | chi2: 1.8170621231121655
[2025-11-26 23:58:52] 2025-11-27 06:58:21,489 | INFO     | current chi2=1.8170621231121655 (change=49.16776215035017 %)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,489 | INFO     | sum of square deviations: 21215132660.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | sum of deviations: 58486741928.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | mean x: 1764214240.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | mean y: 2258138.9511002447
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | intersect: -4861399544.186039
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | chi2: 1.8135580228192723
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | current chi2=1.8135580228192723 (change=0.19284427584080846 %)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | left removable region: 20
[2025-11-26 23:58:52] 2025-11-27 06:58:21,491 | INFO     | sum of square deviations: 18112179597.0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | sum of deviations: 111937771626.50002
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | mean x: 1764214209.5
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | mean y: 2272324.682989691
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | intersect: -10901009979.118101
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | chi2: 0.022513244749586377
[2025-11-26 23:58:52] 2025-11-27 06:58:21,493 | INFO     | current memory leak: 6.18 B/s (using 388 data points, chi2=0.02)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | could have reported an average CPU frequency of 4537 MHz (18 samples)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | ..............................
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . Timing measurements:
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . get job = 0 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . initial setup = 2 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . payload setup = 3 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . stage-in = 0 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . payload execution = 25505 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . stage-out = 3 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | . log creation = 0 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,494 | INFO     | ..............................
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | 
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | job summary report
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | --------------------------------------------------
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | PanDA job id: 6892548926
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | task id: 47493029
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | errors: (none)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | pilot state: finished 
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | transexitcode: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | exeerrorcode: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | exeerrordiag: 
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | exitcode: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | exitmsg: OK
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | cpuconsumptiontime: 101063 s
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | nevents: 1000
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | neventsw: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | pid: 750939
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | pgrp: 750939
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | corecount: 4
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | event service: False
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | sizes: {0: 2284311, 2: 2284573, 10: 2284601, 25511: 2321860, 25515: 2330868, 25517: 2330924, 25521: 2331298}
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | --------------------------------------------------
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | 
[2025-11-26 23:58:52] 2025-11-27 06:58:21,538 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,550 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | job 6892548926 has completed (purged errors)
[2025-11-26 23:58:52] 2025-11-27 06:58:21,551 | INFO     | overall cleanup function is called
[2025-11-26 23:58:52] 2025-11-27 06:58:22,561 | INFO     | --- collectZombieJob: --- 10, [750939]
[2025-11-26 23:58:52] 2025-11-27 06:58:22,561 | INFO     | zombie collector waiting for pid 750939
[2025-11-26 23:58:52] 2025-11-27 06:58:22,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:58:52] 2025-11-27 06:58:22,561 | INFO     | collected zombie processes
[2025-11-26 23:58:52] 2025-11-27 06:58:22,561 | INFO     | will attempt to kill all subprocesses of pid=750939
[2025-11-26 23:58:52] 2025-11-27 06:58:22,650 | INFO     | process IDs to be killed: [750939] (in reverse order)
[2025-11-26 23:58:52] 2025-11-27 06:58:22,690 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:58:52] 2025-11-27 06:58:22,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:58:52] 2025-11-27 06:58:22,694 | INFO     | did not find any defunct processes belonging to 750939
[2025-11-26 23:58:52] 2025-11-27 06:58:22,696 | INFO     | did not find any defunct processes belonging to 750939
[2025-11-26 23:58:52] 2025-11-27 06:58:22,697 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:58:52] 2025-11-27 06:58:22,697 | INFO     | ready for new job
[2025-11-26 23:58:52] 2025-11-27 06:58:22,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:58:52] 2025-11-27 06:58:22,699 | INFO     | ***************************************
[2025-11-26 23:58:52] 2025-11-27 06:58:22,699 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:58:52] 2025-11-27 06:58:22,699 | INFO     | ***************************************
[2025-11-26 23:58:52] 2025-11-27 06:58:22,699 | INFO     | 
[2025-11-26 23:58:52] 2025-11-27 06:58:22,700 | INFO     | architecture information:
[2025-11-26 23:58:52] 2025-11-27 06:58:22,700 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:58:52] 2025-11-27 06:58:22,711 | INFO     | cat /etc/os-release:
[2025-11-26 23:58:52] NAME="CentOS Linux"
[2025-11-26 23:58:52] VERSION="7 (Core)"
[2025-11-26 23:58:52] ID="centos"
[2025-11-26 23:58:52] ID_LIKE="rhel fedora"
[2025-11-26 23:58:52] VERSION_ID="7"
[2025-11-26 23:58:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:58:52] ANSI_COLOR="0;31"
[2025-11-26 23:58:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:58:52] HOME_URL="https://www.centos.org/"
[2025-11-26 23:58:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:58:52] 
[2025-11-26 23:58:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:58:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:58:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:58:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:58:52] 
[2025-11-26 23:58:52] 2025-11-27 06:58:22,711 | INFO     | ***************************************
[2025-11-26 23:58:52] 2025-11-27 06:58:23,211 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | INFO     | sufficient remaining disk space (239182282752 B)
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | INFO     | update_server=False
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:58:52] 2025-11-27 06:58:23,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:58:52] 2025-11-27 06:58:23,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:58:52] 2025-11-27 06:58:23,638 | INFO     | all payload control threads have been joined
[2025-11-26 23:58:52] 2025-11-27 06:58:23,758 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:58:52] 2025-11-27 06:58:23,758 | INFO     | aborting loop
[2025-11-26 23:58:52] 2025-11-27 06:58:24,226 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:24,229 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:24,289 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:24,315 | INFO     | all data control threads have been joined
[2025-11-26 23:58:52] 2025-11-27 06:58:24,464 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:24,644 | INFO     | [payload] control thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:24,644 | INFO     | all job control threads have been joined
[2025-11-26 23:58:52] 2025-11-27 06:58:24,763 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,131 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,135 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,157 | INFO     | [job] validate thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,272 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,320 | INFO     | [data] control thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,333 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,464 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,469 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:25,649 | INFO     | [job] control thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:27,227 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:58:52] 2025-11-27 06:58:27,387 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:58:52] 2025-11-27 06:58:28,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125119635511104)>', '<ExcThread(monitor, started 125119158540032)>']
[2025-11-26 23:58:52] 2025-11-27 06:58:33,973 | INFO     | all workflow threads have been joined
[2025-11-26 23:58:52] 2025-11-27 06:58:33,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:58:52] 2025-11-27 06:58:33,973 | INFO     | traces error code: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:33,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | INFO     | PID=744273 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | INFO     | .. there are 7 such processes running
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:58:52] 2025-11-27 06:58:52,853 | INFO     | [monitor] control thread has ended
[2025-11-26 23:58:52] 2025-11-27 06:58:52,906 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:58:52] 2025-11-27 06:58:52,907 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:58:52] 2025-11-27 06:58:52,909 [wrapper] pilotpid: 744273
[2025-11-26 23:58:52] 2025-11-27 06:58:52,911 [wrapper] Pilot exit status: 0
[2025-11-26 23:58:52] 2025-11-27 06:58:52,916 [wrapper] pandaids: 6892548926
[2025-11-26 23:58:52] 2025-11-27 06:58:52,941 [wrapper] cleanup supervisor_pilot 1135054 744274
[2025-11-26 23:58:52] 2025-11-27 06:58:52,942 [wrapper] Test setup, not cleaning
[2025-11-26 23:58:52] 2025-11-27 06:58:52,944 [wrapper] apfmon messages muted
[2025-11-26 23:58:52] 2025-11-27 06:58:52,946 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:58:52] 2025-11-27 06:58:52,947 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:58:52]  *** Error codes and diagnostics ***
[2025-11-26 23:58:52]     "exeErrorCode": 0,
[2025-11-26 23:58:52]     "exeErrorDiag": "",
[2025-11-26 23:58:52]     "pilotErrorCode": 0,
[2025-11-26 23:58:52]     "pilotErrorDiag": "",
[2025-11-26 23:58:52]  *** Listing of results directory ***
[2025-11-26 23:58:52] total 1315372
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc    576529 Nov 19 01:32 pilot3.tar.gz
[2025-11-26 23:58:52] -rwx------ 1 boinc boinc     36292 Nov 19 01:43 runpilot2-wrapper.sh
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc      5112 Nov 19 01:43 queuedata.json
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc       100 Nov 26 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:58:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 16:52 run_atlas
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc       105 Nov 26 16:52 job.xml
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc      9985 Nov 26 16:52 init_data.xml
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc 407972190 Nov 26 16:52 EVNT.47493027._000343.pool.root.1
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc     15120 Nov 26 16:52 start_atlas.sh
[2025-11-26 23:58:52] drwxrwx--x 2 boinc boinc      4096 Nov 26 16:52 shared
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc    590094 Nov 26 16:52 input.tar.gz
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc         0 Nov 26 16:52 boinc_lockfile
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc      2773 Nov 26 16:52 pandaJob.out
[2025-11-26 23:58:52] -rw------- 1 boinc boinc    991538 Nov 26 16:52 agis_schedconf.cvmfs.json
[2025-11-26 23:58:52] drwx------ 5 boinc boinc      4096 Nov 26 16:52 pilot3
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc       532 Nov 26 23:54 boinc_task_state.xml
[2025-11-26 23:58:52] -rw------- 1 boinc boinc 925134083 Nov 26 23:57 HITS.47493029._003384.pool.root.1
[2025-11-26 23:58:52] -rw------- 1 boinc boinc      1032 Nov 26 23:58 memory_monitor_summary.json
[2025-11-26 23:58:52] -rw------- 1 boinc boinc   1516240 Nov 26 23:58 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:58:52] -rw------- 1 boinc boinc   1262589 Nov 26 23:58 log.47493029._003384.job.log.tgz.1
[2025-11-26 23:58:52] -rw------- 1 boinc boinc      8569 Nov 26 23:58 heartbeat.json
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc      8192 Nov 26 23:58 boinc_mmap_file
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc        29 Nov 26 23:58 wrapper_checkpoint.txt
[2025-11-26 23:58:52] -rw------- 1 boinc boinc       821 Nov 26 23:58 pilotlog.txt
[2025-11-26 23:58:52] -rw------- 1 boinc boinc        95 Nov 26 23:58 pilot_heartbeat.json
[2025-11-26 23:58:52] -rw------- 1 boinc boinc   3695167 Nov 26 23:58 log.47493029._003384.job.log.1
[2025-11-26 23:58:52] -rw------- 1 boinc boinc       353 Nov 26 23:58 output.list
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc       620 Nov 26 23:58 runtime_log
[2025-11-26 23:58:52] -rw------- 1 boinc boinc   4976640 Nov 26 23:58 result.tar.gz
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc      8812 Nov 26 23:58 runtime_log.err
[2025-11-26 23:58:52] -rw------- 1 boinc boinc       665 Nov 26 23:58 3edMDm8xsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQ5GKDmQNzcqm.diag
[2025-11-26 23:58:52] -rw-r--r-- 1 boinc boinc     21325 Nov 26 23:58 stderr.txt
[2025-11-26 23:58:52] HITS file was successfully produced:
[2025-11-26 23:58:52] -rw------- 1 boinc boinc 925134083 Nov 26 23:57 shared/HITS.pool.root.1
[2025-11-26 23:58:52]  *** Contents of shared directory: ***
[2025-11-26 23:58:52] total 1307328
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc 407972190 Nov 26 16:52 ATLAS.root_0
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc     15120 Nov 26 16:52 start_atlas.sh
[2025-11-26 23:58:52] -rw-r--r-- 2 boinc boinc    590094 Nov 26 16:52 input.tar.gz
[2025-11-26 23:58:52] -rw------- 1 boinc boinc 925134083 Nov 26 23:57 HITS.pool.root.1
[2025-11-26 23:58:52] -rw------- 1 boinc boinc   4976640 Nov 26 23:58 result.tar.gz
23:58:54 (740415): run_atlas exited; CPU time 101065.630820
23:58:54 (740415): called boinc_finish(0)

</stderr_txt>
]]>

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