Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:37:19 (3468366): wrapper (7.7.26015): starting
18:37:19 (3468366): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:37:19] Arguments: --nthreads 8
[2025-11-26 18:37:19] Threads: 8
[2025-11-26 18:37:19] Checking for CVMFS
[2025-11-26 18:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:37:21] 2.13.3.0 13122 30720 366468 153340 2 474 19346791 32935937 45557 16776704 0 157484660 99.584 169692924 35828 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:37:21] CVMFS is ok
[2025-11-26 18:37:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:37:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:37:21] Further information can be found at the LHC@home message board.
[2025-11-26 18:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:37:21] Checking for apptainer binary...
[2025-11-26 18:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:37:21] Running /usr/bin/apptainer --version
[2025-11-26 18:37:21] apptainer version 1.4.4-1.el9
[2025-11-26 18:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:37:21] c6-8-25-2.aglt2.org
[2025-11-26 18:37:21] apptainer works
[2025-11-26 18:37:22] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:37:22] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:37:22] Starting ATLAS job with PandaID=6892546333
[2025-11-26 18:37:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:04:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:04:14] 2025-11-27 11:02:37,388 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:04:14] 2025-11-27 11:02:37,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:04:14] 2025-11-27 11:02:37,399 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:04:14] 2025-11-27 11:02:37,400 | INFO     | sum of square deviations: 93675895773.89568
[2025-11-27 07:04:14] 2025-11-27 11:02:37,408 | INFO     | sum of deviations: 1155592463490.9673
[2025-11-27 07:04:14] 2025-11-27 11:02:37,409 | INFO     | mean x: 1764220876.09538
[2025-11-27 07:04:14] 2025-11-27 11:02:37,409 | INFO     | mean y: 2824750.344262295
[2025-11-27 07:04:14] 2025-11-27 11:02:37,409 | INFO     | intersect: -21760728525.62426
[2025-11-27 07:04:14] 2025-11-27 11:02:37,410 | INFO     | chi2: 11.534512213029348
[2025-11-27 07:04:14] 2025-11-27 11:02:37,411 | INFO     | sum of square deviations: 91597504225.35129
[2025-11-27 07:04:14] 2025-11-27 11:02:37,421 | INFO     | sum of deviations: 1371611190304.1187
[2025-11-27 07:04:14] 2025-11-27 11:02:37,421 | INFO     | mean x: 1764220723.6036036
[2025-11-27 07:04:14] 2025-11-27 11:02:37,421 | INFO     | mean y: 2840594.5345345344
[2025-11-27 07:04:14] 2025-11-27 11:02:37,421 | INFO     | intersect: -26415181458.85894
[2025-11-27 07:04:14] 2025-11-27 11:02:37,422 | INFO     | chi2: 8.531297189530747
[2025-11-27 07:04:14] 2025-11-27 11:02:37,422 | INFO     | current chi2=8.531297189530747 (change=26.036775270879502 %)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,423 | INFO     | sum of square deviations: 89550090001.71553
[2025-11-27 07:04:14] 2025-11-27 11:02:37,433 | INFO     | sum of deviations: 1467985670859.2146
[2025-11-27 07:04:14] 2025-11-27 11:02:37,433 | INFO     | mean x: 1764220571.1119516
[2025-11-27 07:04:14] 2025-11-27 11:02:37,433 | INFO     | mean y: 2847763.213313162
[2025-11-27 07:04:14] 2025-11-27 11:02:37,433 | INFO     | intersect: -28917843646.22905
[2025-11-27 07:04:14] 2025-11-27 11:02:37,434 | INFO     | chi2: 7.721945323249435
[2025-11-27 07:04:14] 2025-11-27 11:02:37,434 | INFO     | current chi2=7.721945323249435 (change=9.486855847367677 %)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,434 | INFO     | right removable region: 660
[2025-11-27 07:04:14] 2025-11-27 11:02:37,435 | INFO     | sum of square deviations: 91597096563.55699
[2025-11-27 07:04:14] 2025-11-27 11:02:37,446 | INFO     | sum of deviations: 903228019950.665
[2025-11-27 07:04:14] 2025-11-27 11:02:37,446 | INFO     | mean x: 1764221028.602102
[2025-11-27 07:04:14] 2025-11-27 11:02:37,446 | INFO     | mean y: 2843255.9534534533
[2025-11-27 07:04:14] 2025-11-27 11:02:37,446 | INFO     | intersect: -17393929417.00912
[2025-11-27 07:04:14] 2025-11-27 11:02:37,447 | INFO     | chi2: 7.634160459798073
[2025-11-27 07:04:14] 2025-11-27 11:02:37,447 | INFO     | current chi2=7.634160459798073 (change=33.8146224235252 %)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,448 | INFO     | sum of square deviations: 89549274800.1572
[2025-11-27 07:04:14] 2025-11-27 11:02:37,458 | INFO     | sum of deviations: 688151035169.3164
[2025-11-27 07:04:14] 2025-11-27 11:02:37,459 | INFO     | mean x: 1764221181.1089258
[2025-11-27 07:04:14] 2025-11-27 11:02:37,459 | INFO     | mean y: 2859263.0650529503
[2025-11-27 07:04:14] 2025-11-27 11:02:37,459 | INFO     | intersect: -13554488183.433868
[2025-11-27 07:04:14] 2025-11-27 11:02:37,460 | INFO     | chi2: 4.918430790099664
[2025-11-27 07:04:14] 2025-11-27 11:02:37,460 | INFO     | current chi2=4.918430790099664 (change=35.57338994902711 %)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,461 | INFO     | sum of square deviations: 87532237877.42528
[2025-11-27 07:04:14] 2025-11-27 11:02:37,469 | INFO     | sum of deviations: 574901755336.5613
[2025-11-27 07:04:14] 2025-11-27 11:02:37,470 | INFO     | mean x: 1764221333.6143293
[2025-11-27 07:04:14] 2025-11-27 11:02:37,470 | INFO     | mean y: 2867811.3658536584
[2025-11-27 07:04:14] 2025-11-27 11:02:37,470 | INFO     | intersect: -11584336698.558653
[2025-11-27 07:04:14] 2025-11-27 11:02:37,471 | INFO     | chi2: 4.147167388061752
[2025-11-27 07:04:14] 2025-11-27 11:02:37,471 | INFO     | current chi2=4.147167388061752 (change=15.68108681310291 %)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,471 | INFO     | left removable region: 30
[2025-11-27 07:04:14] 2025-11-27 11:02:37,472 | INFO     | sum of square deviations: 77531410135.7605
[2025-11-27 07:04:14] 2025-11-27 11:02:37,479 | INFO     | sum of deviations: 793973210207.5028
[2025-11-27 07:04:14] 2025-11-27 11:02:37,480 | INFO     | mean x: 1764221455.636508
[2025-11-27 07:04:14] 2025-11-27 11:02:37,480 | INFO     | mean y: 2900934.4650793653
[2025-11-27 07:04:14] 2025-11-27 11:02:37,480 | INFO     | intersect: -18063900252.252842
[2025-11-27 07:04:14] 2025-11-27 11:02:37,481 | INFO     | chi2: 0.14070268578354994
[2025-11-27 07:04:14] 2025-11-27 11:02:37,481 | INFO     | current memory leak: 10.24 B/s (using 630 data points, chi2=0.14)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | could have reported an average CPU frequency of 2666 MHz (26 samples)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | ..............................
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | . Timing measurements:
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | . get job = 0 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | . initial setup = 6 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | . payload setup = 40 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,482 | INFO     | . stage-in = 0 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,483 | INFO     | . payload execution = 40925 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,483 | INFO     | . stage-out = 5 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,483 | INFO     | . log creation = 1 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,483 | INFO     | ..............................
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | 
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | job summary report
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | --------------------------------------------------
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | PanDA job id: 6892546333
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | task id: 47493029
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | errors: (none)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | pilot state: finished 
[2025-11-27 07:04:14] 2025-11-27 11:02:37,581 | INFO     | transexitcode: 0
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | exeerrorcode: 0
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | exeerrordiag: 
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | exitcode: 0
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | exitmsg: OK
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | cpuconsumptiontime: 248331 s
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | nevents: 1000
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | neventsw: 0
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | pid: 3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | pgrp: 3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | corecount: 8
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | event service: False
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | sizes: {0: 2284133, 1: 2284161, 2: 2284332, 13: 2284360, 24: 2284416, 32: 2284706, 35: 2284862, 40969: 2328915, 40970: 2328914, 40975: 2337964, 40978: 2338020, 409
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | --------------------------------------------------
[2025-11-27 07:04:14] 2025-11-27 11:02:37,582 | INFO     | 
[2025-11-27 07:04:14] 2025-11-27 11:02:37,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:04:14] 2025-11-27 11:02:37,606 | INFO     | job 6892546333 has completed (purged errors)
[2025-11-27 07:04:14] 2025-11-27 11:02:37,606 | INFO     | overall cleanup function is called
[2025-11-27 07:04:14] 2025-11-27 11:02:38,622 | INFO     | --- collectZombieJob: --- 10, [3493057]
[2025-11-27 07:04:14] 2025-11-27 11:02:38,623 | INFO     | zombie collector waiting for pid 3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:38,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:04:14] 2025-11-27 11:02:38,623 | INFO     | collected zombie processes
[2025-11-27 07:04:14] 2025-11-27 11:02:38,623 | INFO     | will attempt to kill all subprocesses of pid=3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:39,399 | INFO     | process IDs to be killed: [3493057] (in reverse order)
[2025-11-27 07:04:14] 2025-11-27 11:02:39,582 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:04:14] 2025-11-27 11:02:39,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:04:14] 2025-11-27 11:02:39,605 | INFO     | did not find any defunct processes belonging to 3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:39,628 | INFO     | did not find any defunct processes belonging to 3493057
[2025-11-27 07:04:14] 2025-11-27 11:02:39,630 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:04:14] 2025-11-27 11:02:39,630 | INFO     | ready for new job
[2025-11-27 07:04:14] 2025-11-27 11:02:39,630 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:04:14] 2025-11-27 11:02:39,634 | INFO     | ***************************************
[2025-11-27 07:04:14] 2025-11-27 11:02:39,634 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:04:14] 2025-11-27 11:02:39,634 | INFO     | ***************************************
[2025-11-27 07:04:14] 2025-11-27 11:02:39,634 | INFO     | 
[2025-11-27 07:04:14] 2025-11-27 11:02:39,639 | INFO     | architecture information:
[2025-11-27 07:04:14] 2025-11-27 11:02:39,640 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:04:14] 2025-11-27 11:02:39,720 | INFO     | cat /etc/os-release:
[2025-11-27 07:04:14] NAME="CentOS Linux"
[2025-11-27 07:04:14] VERSION="7 (Core)"
[2025-11-27 07:04:14] ID="centos"
[2025-11-27 07:04:14] ID_LIKE="rhel fedora"
[2025-11-27 07:04:14] VERSION_ID="7"
[2025-11-27 07:04:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:04:14] ANSI_COLOR="0;31"
[2025-11-27 07:04:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:04:14] HOME_URL="https://www.centos.org/"
[2025-11-27 07:04:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:04:14] 
[2025-11-27 07:04:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:04:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:04:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:04:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:04:14] 
[2025-11-27 07:04:14] 2025-11-27 11:02:39,720 | INFO     | ***************************************
[2025-11-27 07:04:14] 2025-11-27 11:02:40,224 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 07:04:14] 2025-11-27 11:02:40,250 | INFO     | sufficient remaining disk space (68082991104 B)
[2025-11-27 07:04:14] 2025-11-27 11:02:40,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | INFO     | update_server=False
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:04:14] 2025-11-27 11:02:40,251 | INFO     | aborting loop
[2025-11-27 07:04:14] 2025-11-27 11:02:40,845 | INFO     | all job control threads have been joined
[2025-11-27 07:04:14] 2025-11-27 11:02:40,851 | INFO     | all data control threads have been joined
[2025-11-27 07:04:14] 2025-11-27 11:02:41,029 | INFO     | all payload control threads have been joined
[2025-11-27 07:04:14] 2025-11-27 11:02:41,257 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,257 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,258 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,472 | INFO     | [job] validate thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,516 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,583 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:04:14] 2025-11-27 11:02:41,852 | INFO     | [job] control thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:41,857 | INFO     | [data] control thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,035 | INFO     | [payload] control thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,063 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,186 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,247 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,261 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,263 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:42,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:04:14] 2025-11-27 11:02:43,613 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:02:45,832 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:04:14] 2025-11-27 11:03:10,163 | INFO     | PID=3476211 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:04:14] 2025-11-27 11:03:10,163 | INFO     | .. there are 61 such processes running
[2025-11-27 07:04:14] 2025-11-27 11:03:10,163 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:04:14] 2025-11-27 11:03:10,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:04:14] 2025-11-27 11:03:10,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:04:14] 2025-11-27 11:03:37,720 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:04:14] 2025-11-27 11:03:39,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022390933312)>', '<ExcThread(monitor, started 140021763925760)>']
[2025-11-27 07:04:14] 2025-11-27 11:03:40,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:04:14] 2025-11-27 11:03:40,377 | INFO     | [monitor] control thread has ended
[2025-11-27 07:04:14] 2025-11-27 11:03:44,440 | INFO     | all workflow threads have been joined
[2025-11-27 07:04:14] 2025-11-27 11:03:44,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:04:14] 2025-11-27 11:03:44,441 | INFO     | traces error code: 0
[2025-11-27 07:04:14] 2025-11-27 11:03:44,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:04:14] 2025-11-27 11:03:44,751 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:04:14] 2025-11-27 11:03:44,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:04:14] 2025-11-27 11:03:44,757 [wrapper] pilotpid: 3476211
[2025-11-27 07:04:14] 2025-11-27 11:03:44,760 [wrapper] Pilot exit status: 0
[2025-11-27 07:04:14] 2025-11-27 11:03:44,847 [wrapper] pandaids: 6892546333
[2025-11-27 07:04:14] 2025-11-27 11:03:45,044 [wrapper] cleanup supervisor_pilot 3115998 3476212
[2025-11-27 07:04:14] 2025-11-27 11:03:45,047 [wrapper] Test setup, not cleaning
[2025-11-27 07:04:14] 2025-11-27 11:03:45,050 [wrapper] apfmon messages muted
[2025-11-27 07:04:14] 2025-11-27 11:03:45,052 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:04:14] 2025-11-27 11:03:45,055 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:04:14]  *** Error codes and diagnostics ***
[2025-11-27 07:04:14]     "exeErrorCode": 0,
[2025-11-27 07:04:14]     "exeErrorDiag": "",
[2025-11-27 07:04:14]     "pilotErrorCode": 0,
[2025-11-27 07:04:14]     "pilotErrorDiag": "",
[2025-11-27 07:04:14]  *** Listing of results directory ***
[2025-11-27 07:04:14] total 1308868
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:16 pilot3.tar.gz
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:23 queuedata.json
[2025-11-27 07:04:14] -rwx------. 1 boincer umatlas     36292 Nov 19 03:23 runpilot2-wrapper.sh
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:04:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:37 run_atlas
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:37 job.xml
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas 409478908 Nov 26 18:37 EVNT.47493027._000298.pool.root.1
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 18:37 start_atlas.sh
[2025-11-27 07:04:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:37 shared
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 18:37 input.tar.gz
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:37 boinc_lockfile
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 18:37 pandaJob.out
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas    991538 Nov 26 18:38 agis_schedconf.cvmfs.json
[2025-11-27 07:04:14] drwx------. 5 boincer umatlas      4096 Nov 26 18:38 pilot3
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:49 boinc_task_state.xml
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas 912341065 Nov 27 06:01 HITS.47493029._002932.pool.root.1
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas      1059 Nov 27 06:02 memory_monitor_summary.json
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas        95 Nov 27 06:02 pilot_heartbeat.json
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas   1919561 Nov 27 06:02 log.47493029._002932.job.log.tgz.1
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas      8636 Nov 27 06:02 heartbeat.json
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas      4824 Nov 27 06:03 pilotlog.txt
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas   5353278 Nov 27 06:03 log.47493029._002932.job.log.1
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas       353 Nov 27 06:03 output.list
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:03 runtime_log
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas   7290880 Nov 27 06:03 result.tar.gz
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas      8709 Nov 27 06:03 runtime_log.err
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas       661 Nov 27 06:03 1XdKDmzesf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ1GKDmem7HBn.diag
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas      6879 Nov 27 07:04 init_data.xml
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:04 boinc_mmap_file
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:04 wrapper_checkpoint.txt
[2025-11-27 07:04:14] -rw-r--r--. 1 boincer umatlas     21167 Nov 27 07:04 stderr.txt
[2025-11-27 07:04:14] HITS file was successfully produced:
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas 912341065 Nov 27 06:01 shared/HITS.pool.root.1
[2025-11-27 07:04:14]  *** Contents of shared directory: ***
[2025-11-27 07:04:14] total 1298568
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas 409478908 Nov 26 18:37 ATLAS.root_0
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 18:37 start_atlas.sh
[2025-11-27 07:04:14] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 18:37 input.tar.gz
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas 912341065 Nov 27 06:01 HITS.pool.root.1
[2025-11-27 07:04:14] -rw-------. 1 boincer umatlas   7290880 Nov 27 06:03 result.tar.gz
07:04:16 (3468366): run_atlas exited; CPU time 250104.026747
07:04:16 (3468366): called boinc_finish(0)

</stderr_txt>
]]>

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