Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 00:34:19 (23304): vboxwrapper version 26210
2025-11-27 00:34:19 (23304): BOINC client version: 8.0.2
2025-11-27 00:34:20 (23304): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-27 00:34:20 (23304): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 00:34:20 (23304): Create VM. (boinc_f7bdac10bc4afbdf, slot#1)
2025-11-27 00:34:21 (23304): Setting Memory Size for VM. (6200MB)
2025-11-27 00:34:21 (23304): Setting CPU Count for VM. (4)
2025-11-27 00:34:21 (23304): Setting Chipset Options for VM.
2025-11-27 00:34:21 (23304): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 00:34:22 (23304): Setting Boot Options for VM.
2025-11-27 00:34:22 (23304): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 00:34:22 (23304): Enabling VM Network Access.
2025-11-27 00:34:23 (23304): Disabling USB Support for VM.
2025-11-27 00:34:23 (23304): Disabling COM Port Support for VM.
2025-11-27 00:34:23 (23304): Disabling LPT Port Support for VM.
2025-11-27 00:34:23 (23304): Disabling Audio Support for VM.
2025-11-27 00:34:24 (23304): Disabling Clipboard Support for VM.
2025-11-27 00:34:24 (23304): Disabling Drag and Drop Support for VM.
2025-11-27 00:34:24 (23304): Adding storage controller(s) to VM.
2025-11-27 00:34:25 (23304): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 00:34:25 (23304): Adding VirtualBox Guest Additions to VM.
2025-11-27 00:34:25 (23304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 00:34:26 (23304): forwarding host port 64342 to guest port 80
2025-11-27 00:34:26 (23304): Enabling remote desktop for VM.
2025-11-27 00:34:26 (23304): Enabling shared directory for VM.
2025-11-27 00:34:27 (23304): Starting VM using VBoxManage interface. (boinc_f7bdac10bc4afbdf, slot#1)
2025-11-27 00:34:32 (23304): Successfully started VM. (PID = '14624')
2025-11-27 00:34:32 (23304): Reporting VM Process ID to BOINC.
2025-11-27 00:34:32 (23304): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-27 00:34:32 (23304): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 00:34:32 (23304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 00:34:32 (23304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 00:34:32 (23304): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 00:34:32 (23304): Detected: Web Application Enabled (http://localhost:64342)
2025-11-27 00:34:32 (23304): Detected: Remote Desktop Enabled (localhost:64343)
2025-11-27 00:34:32 (23304): Preference change detected
2025-11-27 00:34:32 (23304): Setting CPU throttle for VM. (100%)
2025-11-27 00:34:33 (23304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 00:34:34 (23304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 00:34:34 (23304): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 00:34:36 (23304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 00:34:36 (23304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 00:34:36 (23304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 00:34:41 (23304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 00:34:41 (23304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 00:34:45 (23304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000082 main     Log opened 2025-11-27T00:34:43.363085000Z
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000147 main     OS Product: Linux
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000169 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000187 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000204 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000204 main     Process ID: 1362
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000205 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 00:34:45 (23304): Guest Log: 00:00:00.000876 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 00:34:45 (23304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 00:34:45 (23304): Guest Log: [INFO] Mounting shared directory
2025-11-27 00:34:45 (23304): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 00:34:51 (23304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 00:34:51 (23304): Guest Log: [INFO] Detected branch: prod
2025-11-27 00:34:51 (23304): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 00:34:51 (23304): Guest Log: Copying input files
2025-11-27 00:34:52 (23304): Guest Log: Copied input files into RunAtlas.
2025-11-27 00:34:52 (23304): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-11-27 00:34:55 (23304): Guest Log: 00:00:10.001952 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 153 659 000ns (GuestNow=1 764 200 095 211 132 000 ns GuestLast=1 764 203 683 364 791 000 ns fSetTimeLastLoop=true )
2025-11-27 00:35:01 (23304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 00:35:01 (23304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 00:35:01 (23304): Guest Log: 2.6.3.0 1638 0 31624 153340 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-11-27 00:35:02 (23304): Guest Log: copied the webapp to /var/www
2025-11-27 00:35:02 (23304): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-27 00:35:02 (23304): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-27 00:35:02 (23304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 00:35:02 (23304): Guest Log:  *** Starting ATLAS job. (PandaID=6897998890 taskID=47556173) ***
2025-11-27 02:14:37 (23304): Status Report: Elapsed Time: '6000.000000'
2025-11-27 02:14:37 (23304): Status Report: CPU Time: '22540.046875'
2025-11-27 03:54:41 (23304): Status Report: Elapsed Time: '12000.000000'
2025-11-27 03:54:41 (23304): Status Report: CPU Time: '46470.265625'
2025-11-27 05:34:46 (23304): Status Report: Elapsed Time: '18000.000000'
2025-11-27 05:34:46 (23304): Status Report: CPU Time: '70403.734375'
2025-11-27 07:14:50 (23304): Status Report: Elapsed Time: '24000.000000'
2025-11-27 07:14:50 (23304): Status Report: CPU Time: '94339.078125'
2025-11-27 07:25:14 (23304): Guest Log:  *** Job finished ***
2025-11-27 07:25:14 (23304): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:24:41,486 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:24:41,487 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:07,716 | INFO     | [monitor] cgroup control has ended
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:07,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671097276224)>', '<ExcThread(monitor, started 140670396241664)>']
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:08,874 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:08,875 | INFO     | [monitor] control thread has ended
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:12,973 | INFO     | all workflow threads have been joined
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:12,973 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:12,973 | INFO     | traces error code: 0
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:12,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,020 [wrapper] ==== pilot stdout END ====
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,022 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,025 [wrapper] pilotpid: 6040
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,027 [wrapper] Pilot exit status: 0
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,036 [wrapper] pandaids: 6897998890
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,059 [wrapper] cleanup supervisor_pilot 32740 6041
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,062 [wrapper] Test setup, not cleaning
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,065 [wrapper] apfmon messages muted
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,067 [wrapper] ==== wrapper stdout END ====
2025-11-27 07:25:14 (23304): Guest Log: 2025-11-27 06:25:13,070 [wrapper] ==== wrapper stderr END ====
2025-11-27 07:25:14 (23304): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 07:25:14 (23304): Guest Log:     "exeErrorCode": 0,
2025-11-27 07:25:14 (23304): Guest Log:     "exeErrorDiag": "",
2025-11-27 07:25:14 (23304): Guest Log:     "pilotErrorCode": 0,
2025-11-27 07:25:14 (23304): Guest Log:     "pilotErrorDiag": "",
2025-11-27 07:25:14 (23304): Guest Log:  *** Listing of results directory ***
2025-11-27 07:25:14 (23304): Guest Log: total 908852
2025-11-27 07:25:14 (23304): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 01:44 pilot3.tar.gz
2025-11-27 07:25:14 (23304): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 02:35 runpilot2-wrapper.sh
2025-11-27 07:25:14 (23304): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 02:35 queuedata.json
2025-11-27 07:25:14 (23304): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Nov 26 23:34 init_data.xml
2025-11-27 07:25:14 (23304): Guest Log: -rwxr-xr-x. 1 atlas atlas    590102 Nov 26 23:34 input.tar.gz
2025-11-27 07:25:14 (23304): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 23:34 start_atlas.sh
2025-11-27 07:25:14 (23304): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 23:34 EVNT.47483658._003152.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 07:25:14 (23304): Guest Log: -rw-r--r--. 1 atlas atlas      2782 Nov 26 23:35 pandaJob.out
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas        49 Nov 26 23:35 setup.sh.local
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas    991538 Nov 26 23:35 agis_schedconf.cvmfs.json
2025-11-27 07:25:14 (23304): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 23:35 pilot3
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas 917808790 Nov 27 06:23 HITS.47556173._001081.pool.root.1
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas      1041 Nov 27 06:23 memory_monitor_summary.json
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 06:24 agis_ddmendpoints.agis.ALL.json
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas   1238119 Nov 27 06:24 log.47556173._001081.job.log.tgz.1
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas      7983 Nov 27 06:24 heartbeat.json
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 06:24 pilot_heartbeat.json
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 27 06:25 pilotlog.txt
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas   3263659 Nov 27 06:25 log.47556173._001081.job.log.1
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 06:25 output.list
2025-11-27 07:25:14 (23304): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 06:25 runtime_log
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas   4526080 Nov 27 06:25 result.tar.gz
2025-11-27 07:25:14 (23304): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Nov 27 06:25 runtime_log.err
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas       652 Nov 27 06:25 fLsLDm2YKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgkMKDmktiQUm.diag
2025-11-27 07:25:14 (23304): Guest Log: Looking for outputfile HITS.47556173._001081.pool.root.1
2025-11-27 07:25:14 (23304): Guest Log: HITS file was successfully produced
2025-11-27 07:25:14 (23304): Guest Log: -rw-------. 1 atlas atlas 917808790 Nov 27 06:23 /home/atlas/RunAtlas/HITS.47556173._001081.pool.root.1
2025-11-27 07:25:16 (23304): Guest Log: Successfully finished the ATLAS job!
2025-11-27 07:25:16 (23304): Guest Log: Copying the results back to the shared directory!
2025-11-27 07:25:16 (23304): Guest Log:  *** Contents of shared directory: ***
2025-11-27 07:25:16 (23304): Guest Log: total 1304951
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root 413316527 Nov 26 23:34 ATLAS.root_0
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root 917808790 Nov 27 06:25 HITS.pool.root.1
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root      9331 Nov 26 23:34 init_data.xml
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root    590102 Nov 26 23:33 input.tar.gz
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root   4526080 Nov 27 06:25 result.tar.gz
2025-11-27 07:25:16 (23304): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 23:33 start_atlas.sh
2025-11-27 07:25:16 (23304): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 07:25:16 (23304): VM Completion File Detected.
2025-11-27 07:25:16 (23304): Powering off VM.
2025-11-27 07:25:17 (23304): Successfully stopped VM.
2025-11-27 07:25:17 (23304): Deregistering VM. (boinc_f7bdac10bc4afbdf, slot#1)
2025-11-27 07:25:17 (23304): Removing network bandwidth throttle group from VM.
2025-11-27 07:25:17 (23304): Removing VM from VirtualBox.
2025-11-27 07:25:23 (23304): called boinc_finish(0)

</stderr_txt>
]]>

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