Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:34:06 (1376916): wrapper (7.7.26015): starting
18:34:06 (1376916): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:34:06] Arguments: --nthreads 8
[2025-11-26 18:34:06] Threads: 8
[2025-11-26 18:34:06] Checking for CVMFS
[2025-11-26 18:34:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:34:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:34:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:34:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:34:07] 2.13.3.0 11285 30670 323564 153340 0 414 28753997 32935936 51760 16776704 0 224543709 99.606 234745623 37732 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:34:07] CVMFS is ok
[2025-11-26 18:34:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:34:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:34:07] Further information can be found at the LHC@home message board.
[2025-11-26 18:34:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:34:07] Checking for apptainer binary...
[2025-11-26 18:34:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:34:07] Running /usr/bin/apptainer --version
[2025-11-26 18:34:07] apptainer version 1.4.4-1.el9
[2025-11-26 18:34:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:34:07] c7-3-29.aglt2.org
[2025-11-26 18:34:07] apptainer works
[2025-11-26 18:34:07] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:34:07] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:34:07] Starting ATLAS job with PandaID=6897394525
[2025-11-26 18:34:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:31:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:31:01] 2025-11-27 11:30:26,752 | INFO     | time since job start (42947s) is within the limit (172800.0s)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,795 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:31:01] 2025-11-27 11:30:26,801 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3085.0675000000015
[2025-11-27 06:31:01] 2025-11-27 11:30:26,815 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6897394525/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,816 | INFO     | extracted standard info from prmon json
[2025-11-27 06:31:01] 2025-11-27 11:30:26,816 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:31:01] 2025-11-27 11:30:26,816 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:31:01] 2025-11-27 11:30:26,825 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:31:01] 2025-11-27 11:30:26,826 | INFO     | sum of square deviations: 107733375648.67412
[2025-11-27 06:31:01] 2025-11-27 11:30:26,835 | INFO     | sum of deviations: 702320121032.3894
[2025-11-27 06:31:01] 2025-11-27 11:30:26,835 | INFO     | mean x: 1764221545.4338548
[2025-11-27 06:31:01] 2025-11-27 11:30:26,835 | INFO     | mean y: 2864328.39544808
[2025-11-27 06:31:01] 2025-11-27 11:30:26,835 | INFO     | intersect: -11498198196.162169
[2025-11-27 06:31:01] 2025-11-27 11:30:26,836 | INFO     | chi2: 5.775498674275289
[2025-11-27 06:31:01] 2025-11-27 11:30:26,837 | INFO     | sum of square deviations: 105451090995.2263
[2025-11-27 06:31:01] 2025-11-27 11:30:26,846 | INFO     | sum of deviations: 917954087743.6097
[2025-11-27 06:31:01] 2025-11-27 11:30:26,846 | INFO     | mean x: 1764221392.9369628
[2025-11-27 06:31:01] 2025-11-27 11:30:26,846 | INFO     | mean y: 2878731.127507163
[2025-11-27 06:31:01] 2025-11-27 11:30:26,846 | INFO     | intersect: -15354707653.678343
[2025-11-27 06:31:01] 2025-11-27 11:30:26,847 | INFO     | chi2: 2.9957201314229094
[2025-11-27 06:31:01] 2025-11-27 11:30:26,847 | INFO     | current chi2=2.9957201314229094 (change=48.13053728561693 %)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,847 | INFO     | sum of square deviations: 103201272066.76451
[2025-11-27 06:31:01] 2025-11-27 11:30:26,856 | INFO     | sum of deviations: 998744074630.6459
[2025-11-27 06:31:01] 2025-11-27 11:30:26,856 | INFO     | mean x: 1764221240.4401155
[2025-11-27 06:31:01] 2025-11-27 11:30:26,856 | INFO     | mean y: 2884194.9191919193
[2025-11-27 06:31:01] 2025-11-27 11:30:26,856 | INFO     | intersect: -17070602157.91559
[2025-11-27 06:31:01] 2025-11-27 11:30:26,857 | INFO     | chi2: 2.404239900844836
[2025-11-27 06:31:01] 2025-11-27 11:30:26,857 | INFO     | current chi2=2.404239900844836 (change=19.744175177576807 %)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,857 | INFO     | right removable region: 692
[2025-11-27 06:31:01] 2025-11-27 11:30:26,858 | INFO     | sum of square deviations: 105450947584.09895
[2025-11-27 06:31:01] 2025-11-27 11:30:26,866 | INFO     | sum of deviations: 513076949861.6781
[2025-11-27 06:31:01] 2025-11-27 11:30:26,867 | INFO     | mean x: 1764221697.9355302
[2025-11-27 06:31:01] 2025-11-27 11:30:26,867 | INFO     | mean y: 2876947.992836676
[2025-11-27 06:31:01] 2025-11-27 11:30:26,867 | INFO     | intersect: -8581033470.969068
[2025-11-27 06:31:01] 2025-11-27 11:30:26,867 | INFO     | chi2: 3.500340226964248
[2025-11-27 06:31:01] 2025-11-27 11:30:26,867 | INFO     | current chi2=3.500340226964248 (change=39.39328143983218 %)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,868 | INFO     | sum of square deviations: 103201070644.26257
[2025-11-27 06:31:01] 2025-11-27 11:30:26,877 | INFO     | sum of deviations: 474147897185.50446
[2025-11-27 06:31:01] 2025-11-27 11:30:26,877 | INFO     | mean x: 1764221850.4343433
[2025-11-27 06:31:01] 2025-11-27 11:30:26,877 | INFO     | mean y: 2879584.6594516593
[2025-11-27 06:31:01] 2025-11-27 11:30:26,877 | INFO     | intersect: -8102676640.000399
[2025-11-27 06:31:01] 2025-11-27 11:30:26,878 | INFO     | chi2: 3.460373617585204
[2025-11-27 06:31:01] 2025-11-27 11:30:26,878 | INFO     | current chi2=3.460373617585204 (change=1.141792134123654 %)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,878 | INFO     | left removable region: 20
[2025-11-27 06:31:01] 2025-11-27 11:30:26,879 | INFO     | sum of square deviations: 94100861645.61908
[2025-11-27 06:31:01] 2025-11-27 11:30:26,887 | INFO     | sum of deviations: 717899703107.4165
[2025-11-27 06:31:01] 2025-11-27 11:30:26,887 | INFO     | mean x: 1764221819.9404762
[2025-11-27 06:31:01] 2025-11-27 11:30:26,887 | INFO     | mean y: 2903302.6354166665
[2025-11-27 06:31:01] 2025-11-27 11:30:26,887 | INFO     | intersect: -13456424259.32276
[2025-11-27 06:31:01] 2025-11-27 11:30:26,888 | INFO     | chi2: 0.054598141422312355
[2025-11-27 06:31:01] 2025-11-27 11:30:26,888 | INFO     | current memory leak: 7.63 B/s (using 672 data points, chi2=0.05)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | could have reported an average CPU frequency of 3185 MHz (27 samples)
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | ..............................
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . Timing measurements:
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . get job = 0 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . initial setup = 3 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . payload setup = 14 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . stage-in = 0 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . payload execution = 42884 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,889 | INFO     | . stage-out = 3 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,890 | INFO     | . log creation = 0 s
[2025-11-27 06:31:01] 2025-11-27 11:30:26,890 | INFO     | ..............................
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | 
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | job summary report
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | --------------------------------------------------
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | PanDA job id: 6897394525
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | task id: 47556161
[2025-11-27 06:31:01] 2025-11-27 11:30:27,167 | INFO     | errors: (none)
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | pilot state: finished 
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | transexitcode: 0
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | exeerrorcode: 0
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | exeerrordiag: 
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | exitcode: 0
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | exitmsg: OK
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | cpuconsumptiontime: 203066 s
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | nevents: 1000
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | neventsw: 0
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | pid: 1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | pgrp: 1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:27,168 | INFO     | corecount: 8
[2025-11-27 06:31:01] 2025-11-27 11:30:27,169 | INFO     | event service: False
[2025-11-27 06:31:01] 2025-11-27 11:30:27,169 | INFO     | sizes: {0: 2284265, 11: 2284265, 16: 2284555, 22: 2284583, 42902: 2329878, 42906: 2338872, 42908: 2339056, 42916: 2339302}
[2025-11-27 06:31:01] 2025-11-27 11:30:27,169 | INFO     | --------------------------------------------------
[2025-11-27 06:31:01] 2025-11-27 11:30:27,169 | INFO     | 
[2025-11-27 06:31:01] 2025-11-27 11:30:27,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | job 6897394525 has completed (purged errors)
[2025-11-27 06:31:01] 2025-11-27 11:30:27,190 | INFO     | overall cleanup function is called
[2025-11-27 06:31:01] 2025-11-27 11:30:28,204 | INFO     | --- collectZombieJob: --- 10, [1403775]
[2025-11-27 06:31:01] 2025-11-27 11:30:28,204 | INFO     | zombie collector waiting for pid 1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:28,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:31:01] 2025-11-27 11:30:28,204 | INFO     | collected zombie processes
[2025-11-27 06:31:01] 2025-11-27 11:30:28,204 | INFO     | will attempt to kill all subprocesses of pid=1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:28,889 | INFO     | process IDs to be killed: [1403775] (in reverse order)
[2025-11-27 06:31:01] 2025-11-27 11:30:29,114 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:31:01] 2025-11-27 11:30:29,114 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:31:01] 2025-11-27 11:30:29,142 | INFO     | did not find any defunct processes belonging to 1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:29,170 | INFO     | did not find any defunct processes belonging to 1403775
[2025-11-27 06:31:01] 2025-11-27 11:30:29,171 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:31:01] 2025-11-27 11:30:29,172 | INFO     | ready for new job
[2025-11-27 06:31:01] 2025-11-27 11:30:29,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:31:01] 2025-11-27 11:30:29,175 | INFO     | ***************************************
[2025-11-27 06:31:01] 2025-11-27 11:30:29,175 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:31:01] 2025-11-27 11:30:29,175 | INFO     | ***************************************
[2025-11-27 06:31:01] 2025-11-27 11:30:29,175 | INFO     | 
[2025-11-27 06:31:01] 2025-11-27 11:30:29,180 | INFO     | architecture information:
[2025-11-27 06:31:01] 2025-11-27 11:30:29,182 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:31:01] 2025-11-27 11:30:29,206 | INFO     | cat /etc/os-release:
[2025-11-27 06:31:01] NAME="CentOS Linux"
[2025-11-27 06:31:01] VERSION="7 (Core)"
[2025-11-27 06:31:01] ID="centos"
[2025-11-27 06:31:01] ID_LIKE="rhel fedora"
[2025-11-27 06:31:01] VERSION_ID="7"
[2025-11-27 06:31:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:31:01] ANSI_COLOR="0;31"
[2025-11-27 06:31:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:31:01] HOME_URL="https://www.centos.org/"
[2025-11-27 06:31:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:31:01] 
[2025-11-27 06:31:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:31:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:31:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:31:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:31:01] 
[2025-11-27 06:31:01] 2025-11-27 11:30:29,206 | INFO     | ***************************************
[2025-11-27 06:31:01] 2025-11-27 11:30:29,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 06:31:01] 2025-11-27 11:30:29,731 | INFO     | sufficient remaining disk space (67056435200 B)
[2025-11-27 06:31:01] 2025-11-27 11:30:29,731 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:31:01] 2025-11-27 11:30:29,731 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:31:01] 2025-11-27 11:30:29,731 | INFO     | update_server=False
[2025-11-27 06:31:01] 2025-11-27 11:30:29,731 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:31:01] 2025-11-27 11:30:29,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:31:01] 2025-11-27 11:30:29,908 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 06:31:01] 2025-11-27 11:30:29,909 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 06:31:01] 2025-11-27 11:30:29,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:31:01] 2025-11-27 11:30:29,909 | INFO     | will abort loop
[2025-11-27 06:31:01] 2025-11-27 11:30:30,015 | INFO     | all payload control threads have been joined
[2025-11-27 06:31:01] 2025-11-27 11:30:30,303 | INFO     | all job control threads have been joined
[2025-11-27 06:31:01] 2025-11-27 11:30:30,465 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:31:01] 2025-11-27 11:30:30,726 | INFO     | all data control threads have been joined
[2025-11-27 06:31:01] 2025-11-27 11:30:30,739 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:30,914 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,021 | INFO     | [payload] control thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,309 | INFO     | [job] control thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,350 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,731 | INFO     | [data] control thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,734 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,971 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:31,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:31:01] 2025-11-27 11:30:32,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:32,073 | INFO     | [job] validate thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:32,104 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:32,327 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:32,470 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:32,982 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:33,747 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:31:01] 2025-11-27 11:30:53,408 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:31:01] 2025-11-27 11:30:54,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487737636672)>', '<ExcThread(monitor, started 140486929000192)>']
[2025-11-27 06:31:01] 2025-11-27 11:30:59,850 | INFO     | all workflow threads have been joined
[2025-11-27 06:31:01] 2025-11-27 11:30:59,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:31:01] 2025-11-27 11:30:59,851 | INFO     | traces error code: 0
[2025-11-27 06:31:01] 2025-11-27 11:30:59,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:31:01] 2025-11-27 11:31:00,650 | INFO     | PID=1389393 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:31:01] 2025-11-27 11:31:00,650 | INFO     | .. there are 75 such processes running
[2025-11-27 06:31:01] 2025-11-27 11:31:00,651 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:31:01] 2025-11-27 11:31:00,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:31:01] 2025-11-27 11:31:00,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:31:01] 2025-11-27 11:31:00,652 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:31:01] 2025-11-27 11:31:00,652 | INFO     | [monitor] control thread has ended
[2025-11-27 06:31:01] 2025-11-27 11:31:00,799 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:31:01] 2025-11-27 11:31:00,802 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:31:01] 2025-11-27 11:31:00,810 [wrapper] pilotpid: 1389393
[2025-11-27 06:31:01] 2025-11-27 11:31:00,820 [wrapper] Pilot exit status: 0
[2025-11-27 06:31:01] 2025-11-27 11:31:00,847 [wrapper] pandaids: 6897394525
[2025-11-27 06:31:01] 2025-11-27 11:31:01,024 [wrapper] cleanup supervisor_pilot 1416328 1389394
[2025-11-27 06:31:01] 2025-11-27 11:31:01,028 [wrapper] Test setup, not cleaning
[2025-11-27 06:31:01] 2025-11-27 11:31:01,032 [wrapper] apfmon messages muted
[2025-11-27 06:31:01] 2025-11-27 11:31:01,034 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:31:01] 2025-11-27 11:31:01,047 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:31:01]  *** Error codes and diagnostics ***
[2025-11-27 06:31:01]     "exeErrorCode": 0,
[2025-11-27 06:31:01]     "exeErrorDiag": "",
[2025-11-27 06:31:01]     "pilotErrorCode": 0,
[2025-11-27 06:31:01]     "pilotErrorDiag": "",
[2025-11-27 06:31:01]  *** Listing of results directory ***
[2025-11-27 06:31:01] total 1324916
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 06:31:01] -rwx------. 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:31:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:34 run_atlas
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:34 job.xml
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas 410153417 Nov 26 18:34 EVNT.47483658._002223.pool.root.1
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:34 start_atlas.sh
[2025-11-27 06:31:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:34 shared
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 18:34 input.tar.gz
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:34 boinc_lockfile
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 18:34 pandaJob.out
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas        57 Nov 26 18:34 setup.sh.local
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas    991538 Nov 26 18:34 agis_schedconf.cvmfs.json
[2025-11-27 06:31:01] drwx------. 5 boincer umatlas      4096 Nov 26 18:34 pilot3
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas       532 Nov 27 06:19 boinc_task_state.xml
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas 927710594 Nov 27 06:29 HITS.47556161._002063.pool.root.1
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas      1061 Nov 27 06:30 memory_monitor_summary.json
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas      6945 Nov 27 06:30 init_data.xml
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas   1926837 Nov 27 06:30 log.47556161._002063.job.log.tgz.1
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas      8593 Nov 27 06:30 heartbeat.json
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:30 boinc_mmap_file
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:30 wrapper_checkpoint.txt
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas        95 Nov 27 06:31 pilot_heartbeat.json
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas       823 Nov 27 06:31 pilotlog.txt
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas   5536800 Nov 27 06:31 log.47556161._002063.job.log.1
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas       353 Nov 27 06:31 output.list
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:31 runtime_log
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas   7485440 Nov 27 06:31 result.tar.gz
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 06:31 runtime_log.err
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas       662 Nov 27 06:31 EExKDmSVBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpUJKDmTBgHZn.diag
[2025-11-27 06:31:01] -rw-r--r--. 1 boincer umatlas     21316 Nov 27 06:31 stderr.txt
[2025-11-27 06:31:01] HITS file was successfully produced:
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas 927710594 Nov 27 06:29 shared/HITS.pool.root.1
[2025-11-27 06:31:01]  *** Contents of shared directory: ***
[2025-11-27 06:31:01] total 1314428
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas 410153417 Nov 26 18:34 ATLAS.root_0
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:34 start_atlas.sh
[2025-11-27 06:31:01] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 18:34 input.tar.gz
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas 927710594 Nov 27 06:29 HITS.pool.root.1
[2025-11-27 06:31:01] -rw-------. 1 boincer umatlas   7485440 Nov 27 06:31 result.tar.gz
06:31:02 (1376916): run_atlas exited; CPU time 204334.162664
06:31:02 (1376916): called boinc_finish(0)

</stderr_txt>
]]>

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