Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:39:09 (237124): wrapper (7.7.26015): starting
18:39:09 (237124): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:39:09] Arguments: --nthreads 8
[2025-11-26 18:39:09] Threads: 8
[2025-11-26 18:39:09] Checking for CVMFS
[2025-11-26 18:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:39:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:39:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:39:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:39:10] 2.13.3.0 1933508 27923 335952 153340 2 191 31219301 32503808 60006 16776704 0 176007635 99.538 202278172 37380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:39:10] CVMFS is ok
[2025-11-26 18:39:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:39:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:39:10] Further information can be found at the LHC@home message board.
[2025-11-26 18:39:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:39:10] Checking for apptainer binary...
[2025-11-26 18:39:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:39:10] Running /usr/bin/apptainer --version
[2025-11-26 18:39:10] apptainer version 1.4.4-1.el9
[2025-11-26 18:39:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:39:10] c7-3-16.aglt2.org
[2025-11-26 18:39:10] apptainer works
[2025-11-26 18:39:10] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:39:10] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:39:10] Starting ATLAS job with PandaID=6897998859
[2025-11-26 18:39:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:31:03]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:31:03] 2025-11-27 12:30:20,800 | INFO     | monitor loop #2850: job 0:6897998859 is in state 'finished'
[2025-11-27 07:31:03] 2025-11-27 12:30:20,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,443 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 07:31:03] 2025-11-27 12:30:21,452 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3314.5070312499993
[2025-11-27 07:31:03] 2025-11-27 12:30:21,459 | INFO     | time since job start (46244s) is within the limit (172800.0s)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,472 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897998859/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,473 | INFO     | extracted standard info from prmon json
[2025-11-27 07:31:03] 2025-11-27 12:30:21,473 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:31:03] 2025-11-27 12:30:21,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:31:03] 2025-11-27 12:30:21,532 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:31:03] 2025-11-27 12:30:21,533 | INFO     | sum of square deviations: 134511970102.082
[2025-11-27 07:31:03] 2025-11-27 12:30:21,556 | INFO     | sum of deviations: 1306576740801.3906
[2025-11-27 07:31:03] 2025-11-27 12:30:21,557 | INFO     | mean x: 1764223501.9379127
[2025-11-27 07:31:03] 2025-11-27 12:30:21,557 | INFO     | mean y: 2892347.7529722587
[2025-11-27 07:31:03] 2025-11-27 12:30:21,557 | INFO     | intersect: -17133823376.93609
[2025-11-27 07:31:03] 2025-11-27 12:30:21,558 | INFO     | chi2: 7.880653679135699
[2025-11-27 07:31:03] 2025-11-27 12:30:21,558 | INFO     | sum of square deviations: 131864360257.65346
[2025-11-27 07:31:03] 2025-11-27 12:30:21,568 | INFO     | sum of deviations: 1576713519272.4773
[2025-11-27 07:31:03] 2025-11-27 12:30:21,568 | INFO     | mean x: 1764223349.444149
[2025-11-27 07:31:03] 2025-11-27 12:30:21,568 | INFO     | mean y: 2907912.142287234
[2025-11-27 07:31:03] 2025-11-27 12:30:21,568 | INFO     | intersect: -21092062712.593384
[2025-11-27 07:31:03] 2025-11-27 12:30:21,569 | INFO     | chi2: 4.37817569736279
[2025-11-27 07:31:03] 2025-11-27 12:30:21,569 | INFO     | current chi2=4.37817569736279 (change=44.444003307058644 %)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,570 | INFO     | sum of square deviations: 129251636436.96446
[2025-11-27 07:31:03] 2025-11-27 12:30:21,579 | INFO     | sum of deviations: 1633303130706.3647
[2025-11-27 07:31:03] 2025-11-27 12:30:21,579 | INFO     | mean x: 1764223196.947791
[2025-11-27 07:31:03] 2025-11-27 12:30:21,579 | INFO     | mean y: 2911203.0093708164
[2025-11-27 07:31:03] 2025-11-27 12:30:21,579 | INFO     | intersect: -22290897604.93497
[2025-11-27 07:31:03] 2025-11-27 12:30:21,580 | INFO     | chi2: 3.9667982231878756
[2025-11-27 07:31:03] 2025-11-27 12:30:21,580 | INFO     | current chi2=3.9667982231878756 (change=9.396093318564384 %)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,580 | INFO     | right removable region: 746
[2025-11-27 07:31:03] 2025-11-27 12:30:21,581 | INFO     | sum of square deviations: 131863927157.65335
[2025-11-27 07:31:03] 2025-11-27 12:30:21,590 | INFO     | sum of deviations: 1041411234850.0282
[2025-11-27 07:31:03] 2025-11-27 12:30:21,590 | INFO     | mean x: 1764223654.444149
[2025-11-27 07:31:03] 2025-11-27 12:30:21,591 | INFO     | mean y: 2907610.6316489363
[2025-11-27 07:31:03] 2025-11-27 12:30:21,591 | INFO     | intersect: -13930261028.65588
[2025-11-27 07:31:03] 2025-11-27 12:30:21,591 | INFO     | chi2: 4.764783703001919
[2025-11-27 07:31:03] 2025-11-27 12:30:21,591 | INFO     | current chi2=4.764783703001919 (change=39.53821729767357 %)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,592 | INFO     | sum of square deviations: 129250999231.85818
[2025-11-27 07:31:03] 2025-11-27 12:30:21,601 | INFO     | sum of deviations: 942848276358.8208
[2025-11-27 07:31:03] 2025-11-27 12:30:21,602 | INFO     | mean x: 1764223806.9464524
[2025-11-27 07:31:03] 2025-11-27 12:30:21,602 | INFO     | mean y: 2913355.970548862
[2025-11-27 07:31:03] 2025-11-27 12:30:21,602 | INFO     | intersect: -12866583865.530706
[2025-11-27 07:31:03] 2025-11-27 12:30:21,602 | INFO     | chi2: 4.372116594196888
[2025-11-27 07:31:03] 2025-11-27 12:30:21,602 | INFO     | current chi2=4.372116594196888 (change=8.241026944363542 %)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,603 | INFO     | left removable region: 20
[2025-11-27 07:31:03] 2025-11-27 12:30:21,603 | INFO     | sum of square deviations: 118654141230.17632
[2025-11-27 07:31:03] 2025-11-27 12:30:21,612 | INFO     | sum of deviations: 1147457128424.678
[2025-11-27 07:31:03] 2025-11-27 12:30:21,613 | INFO     | mean x: 1764223776.4573002
[2025-11-27 07:31:03] 2025-11-27 12:30:21,613 | INFO     | mean y: 2939827.7961432505
[2025-11-27 07:31:03] 2025-11-27 12:30:21,613 | INFO     | intersect: -17058168427.205017
[2025-11-27 07:31:03] 2025-11-27 12:30:21,613 | INFO     | chi2: 0.281998400819816
[2025-11-27 07:31:03] 2025-11-27 12:30:21,614 | INFO     | current memory leak: 9.67 B/s (using 726 data points, chi2=0.28)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,614 | INFO     | could have reported an average CPU frequency of 3283 MHz (29 samples)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,614 | INFO     | ..............................
[2025-11-27 07:31:03] 2025-11-27 12:30:21,614 | INFO     | . Timing measurements:
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . get job = 0 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . initial setup = 3 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . payload setup = 15 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . stage-in = 0 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . payload execution = 46177 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . stage-out = 3 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | . log creation = 0 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,615 | INFO     | ..............................
[2025-11-27 07:31:03] 2025-11-27 12:30:21,824 | INFO     | 
[2025-11-27 07:31:03] 2025-11-27 12:30:21,824 | INFO     | job summary report
[2025-11-27 07:31:03] 2025-11-27 12:30:21,824 | INFO     | --------------------------------------------------
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | PanDA job id: 6897998859
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | task id: 47556161
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | errors: (none)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | pilot state: finished 
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | transexitcode: 0
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | exeerrorcode: 0
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | exeerrordiag: 
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | exitcode: 0
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | exitmsg: OK
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | cpuconsumptiontime: 190652 s
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | nevents: 1000
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | neventsw: 0
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | pid: 266267
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | pgrp: 266267
[2025-11-27 07:31:03] 2025-11-27 12:30:21,825 | INFO     | corecount: 8
[2025-11-27 07:31:03] 2025-11-27 12:30:21,826 | INFO     | event service: False
[2025-11-27 07:31:03] 2025-11-27 12:30:21,826 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284582, 23: 2284582, 46197: 2331100, 46200: 2340278, 46209: 2340468}
[2025-11-27 07:31:03] 2025-11-27 12:30:21,826 | INFO     | --------------------------------------------------
[2025-11-27 07:31:03] 2025-11-27 12:30:21,826 | INFO     | 
[2025-11-27 07:31:03] 2025-11-27 12:30:21,826 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 07:31:03] 2025-11-27 12:30:21,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:31:03] 2025-11-27 12:30:21,922 | INFO     | job 6897998859 has completed (purged errors)
[2025-11-27 07:31:03] 2025-11-27 12:30:21,922 | INFO     | overall cleanup function is called
[2025-11-27 07:31:03] 2025-11-27 12:30:22,967 | INFO     | --- collectZombieJob: --- 10, [266267]
[2025-11-27 07:31:03] 2025-11-27 12:30:22,968 | INFO     | zombie collector waiting for pid 266267
[2025-11-27 07:31:03] 2025-11-27 12:30:22,968 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:31:03] 2025-11-27 12:30:22,968 | INFO     | collected zombie processes
[2025-11-27 07:31:03] 2025-11-27 12:30:22,968 | INFO     | will attempt to kill all subprocesses of pid=266267
[2025-11-27 07:31:03] 2025-11-27 12:30:23,832 | INFO     | process IDs to be killed: [266267] (in reverse order)
[2025-11-27 07:31:03] 2025-11-27 12:30:24,123 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:31:03] 2025-11-27 12:30:24,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:31:03] 2025-11-27 12:30:24,155 | INFO     | did not find any defunct processes belonging to 266267
[2025-11-27 07:31:03] 2025-11-27 12:30:24,188 | INFO     | did not find any defunct processes belonging to 266267
[2025-11-27 07:31:03] 2025-11-27 12:30:24,191 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:31:03] 2025-11-27 12:30:24,191 | INFO     | ready for new job
[2025-11-27 07:31:03] 2025-11-27 12:30:24,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:31:03] 2025-11-27 12:30:24,195 | INFO     | ***************************************
[2025-11-27 07:31:03] 2025-11-27 12:30:24,195 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:31:03] 2025-11-27 12:30:24,195 | INFO     | ***************************************
[2025-11-27 07:31:03] 2025-11-27 12:30:24,195 | INFO     | 
[2025-11-27 07:31:03] 2025-11-27 12:30:24,200 | INFO     | architecture information:
[2025-11-27 07:31:03] 2025-11-27 12:30:24,201 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:31:03] 2025-11-27 12:30:24,230 | INFO     | cat /etc/os-release:
[2025-11-27 07:31:03] NAME="CentOS Linux"
[2025-11-27 07:31:03] VERSION="7 (Core)"
[2025-11-27 07:31:03] ID="centos"
[2025-11-27 07:31:03] ID_LIKE="rhel fedora"
[2025-11-27 07:31:03] VERSION_ID="7"
[2025-11-27 07:31:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:31:03] ANSI_COLOR="0;31"
[2025-11-27 07:31:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:31:03] HOME_URL="https://www.centos.org/"
[2025-11-27 07:31:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:31:03] 
[2025-11-27 07:31:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:31:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:31:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:31:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:31:03] 
[2025-11-27 07:31:03] 2025-11-27 12:30:24,230 | INFO     | ***************************************
[2025-11-27 07:31:03] 2025-11-27 12:30:24,739 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 07:31:03] 2025-11-27 12:30:24,779 | INFO     | sufficient remaining disk space (85379252224 B)
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | INFO     | update_server=False
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:31:03] 2025-11-27 12:30:24,780 | INFO     | aborting loop
[2025-11-27 07:31:03] 2025-11-27 12:30:24,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:31:03] 2025-11-27 12:30:24,815 | INFO     | all job control threads have been joined
[2025-11-27 07:31:03] 2025-11-27 12:30:24,998 | INFO     | all data control threads have been joined
[2025-11-27 07:31:03] 2025-11-27 12:30:25,785 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:25,786 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:25,822 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:25,823 | INFO     | [job] control thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:25,919 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,005 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,008 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:31:03] 2025-11-27 12:30:26,017 | INFO     | [data] control thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,093 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,185 | INFO     | all payload control threads have been joined
[2025-11-27 07:31:03] 2025-11-27 12:30:26,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:31:03] 2025-11-27 12:30:26,827 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,876 | INFO     | [job] validate thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,877 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:26,951 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:27,192 | INFO     | [payload] control thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:27,702 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:28,015 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:28,820 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:31:03] 2025-11-27 12:30:55,513 | INFO     | PID=246756 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 07:31:03] 2025-11-27 12:30:55,513 | INFO     | .. there are 95 such processes running
[2025-11-27 07:31:03] 2025-11-27 12:30:55,514 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:31:03] 2025-11-27 12:30:55,514 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:31:03] 2025-11-27 12:30:55,514 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:31:03] 2025-11-27 12:30:57,043 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:31:03] 2025-11-27 12:30:58,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269085943616)>', '<ExcThread(monitor, started 140268456109824)>']
[2025-11-27 07:31:03] 2025-11-27 12:30:58,530 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:31:03] 2025-11-27 12:30:58,530 | INFO     | [monitor] control thread has ended
[2025-11-27 07:31:03] 2025-11-27 12:31:03,283 | INFO     | all workflow threads have been joined
[2025-11-27 07:31:03] 2025-11-27 12:31:03,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:31:03] 2025-11-27 12:31:03,284 | INFO     | traces error code: 0
[2025-11-27 07:31:03] 2025-11-27 12:31:03,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:31:03] 2025-11-27 12:31:03,404 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:31:03] 2025-11-27 12:31:03,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:31:03] 2025-11-27 12:31:03,409 [wrapper] pilotpid: 246756
[2025-11-27 07:31:03] 2025-11-27 12:31:03,413 [wrapper] Pilot exit status: 0
[2025-11-27 07:31:03] 2025-11-27 12:31:03,434 [wrapper] pandaids: 6897998859
[2025-11-27 07:31:03] 2025-11-27 12:31:03,597 [wrapper] cleanup supervisor_pilot 2531035 246757
[2025-11-27 07:31:03] 2025-11-27 12:31:03,600 [wrapper] Test setup, not cleaning
[2025-11-27 07:31:03] 2025-11-27 12:31:03,604 [wrapper] apfmon messages muted
[2025-11-27 07:31:03] 2025-11-27 12:31:03,607 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:31:03] 2025-11-27 12:31:03,609 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:31:03]  *** Error codes and diagnostics ***
[2025-11-27 07:31:03]     "exeErrorCode": 0,
[2025-11-27 07:31:03]     "exeErrorDiag": "",
[2025-11-27 07:31:03]     "pilotErrorCode": 0,
[2025-11-27 07:31:03]     "pilotErrorDiag": "",
[2025-11-27 07:31:03]  *** Listing of results directory ***
[2025-11-27 07:31:03] total 1317192
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 07:31:03] -rwx------. 1 boincer umatlas     36292 Nov 25 21:35 runpilot2-wrapper.sh
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:35 queuedata.json
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:31:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:39 run_atlas
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:39 job.xml
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas 410054058 Nov 26 18:39 EVNT.47483658._002382.pool.root.1
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:39 start_atlas.sh
[2025-11-27 07:31:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:39 shared
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 18:39 input.tar.gz
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:39 boinc_lockfile
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:39 pandaJob.out
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas        57 Nov 26 18:39 setup.sh.local
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas    991538 Nov 26 18:39 agis_schedconf.cvmfs.json
[2025-11-27 07:31:03] drwx------. 5 boincer umatlas      4096 Nov 26 18:39 pilot3
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas       533 Nov 27 07:21 boinc_task_state.xml
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 07:29 init_data.xml
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas 918982090 Nov 27 07:29 HITS.47556161._003643.pool.root.1
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas      1071 Nov 27 07:30 memory_monitor_summary.json
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas   1976085 Nov 27 07:30 log.47556161._003643.job.log.tgz.1
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas      8623 Nov 27 07:30 heartbeat.json
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas        95 Nov 27 07:30 pilot_heartbeat.json
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:31 boinc_mmap_file
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:31 wrapper_checkpoint.txt
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas      4823 Nov 27 07:31 pilotlog.txt
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas   5945715 Nov 27 07:31 log.47556161._003643.job.log.1
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas       353 Nov 27 07:31 output.list
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:31 runtime_log
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas   7946240 Nov 27 07:31 result.tar.gz
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 07:31 runtime_log.err
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas       663 Nov 27 07:31 7jqMDmwYKi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfmJKDm6hfZLm.diag
[2025-11-27 07:31:03] -rw-r--r--. 1 boincer umatlas     21315 Nov 27 07:31 stderr.txt
[2025-11-27 07:31:03] HITS file was successfully produced:
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas 918982090 Nov 27 07:29 shared/HITS.pool.root.1
[2025-11-27 07:31:03]  *** Contents of shared directory: ***
[2025-11-27 07:31:03] total 1306252
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas 410054058 Nov 26 18:39 ATLAS.root_0
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:39 start_atlas.sh
[2025-11-27 07:31:03] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 18:39 input.tar.gz
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas 918982090 Nov 27 07:29 HITS.pool.root.1
[2025-11-27 07:31:03] -rw-------. 1 boincer umatlas   7946240 Nov 27 07:31 result.tar.gz
07:31:05 (237124): run_atlas exited; CPU time 192059.544121
07:31:05 (237124): called boinc_finish(0)

</stderr_txt>
]]>

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