Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:27:51 (1412695): wrapper (7.7.26015): starting
19:27:51 (1412695): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 19:27:51] Arguments: --nthreads 9
[2025-11-26 19:27:51] Threads: 9
[2025-11-26 19:27:51] Checking for CVMFS
[2025-11-26 19:27:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:27:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:27:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:27:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:27:53] 2.13.3.0 10079 29072 395356 153341 0 301 28004698 32935937 59129 16776704 0 325002546 99.794 167248590 29070 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:27:53] CVMFS is ok
[2025-11-26 19:27:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:27:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:27:53] Further information can be found at the LHC@home message board.
[2025-11-26 19:27:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:27:53] Checking for apptainer binary...
[2025-11-26 19:27:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:27:53] Running /usr/bin/apptainer --version
[2025-11-26 19:27:53] apptainer version 1.4.4-1.el9
[2025-11-26 19:27:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:28:14] lc-12-33.aglt2.org
[2025-11-26 19:28:14] apptainer works
[2025-11-26 19:28:14] Set ATHENA_PROC_NUMBER=9
[2025-11-26 19:28:14] Set ATHENA_CORE_NUMBER=9
[2025-11-26 19:28:14] Starting ATLAS job with PandaID=6897998768
[2025-11-26 19:28:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:12:39]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:12:39] 2025-11-27 13:12:05,084 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:12:39] 2025-11-27 13:12:05,084 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:12:39] 2025-11-27 13:12:05,096 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:12:39] 2025-11-27 13:12:05,097 | INFO     | sum of square deviations: 130287861629.77579
[2025-11-27 08:12:39] 2025-11-27 13:12:05,107 | INFO     | sum of deviations: 979300233615.8954
[2025-11-27 08:12:39] 2025-11-27 13:12:05,107 | INFO     | mean x: 1764226260.2429907
[2025-11-27 08:12:39] 2025-11-27 13:12:05,107 | INFO     | mean y: 3007048.7423230973
[2025-11-27 08:12:39] 2025-11-27 13:12:05,108 | INFO     | intersect: -13257684831.493515
[2025-11-27 08:12:39] 2025-11-27 13:12:05,108 | INFO     | chi2: 8.747213306070849
[2025-11-27 08:12:39] 2025-11-27 13:12:05,109 | INFO     | sum of square deviations: 127696171396.99898
[2025-11-27 08:12:39] 2025-11-27 13:12:05,121 | INFO     | sum of deviations: 1245033294400.7634
[2025-11-27 08:12:39] 2025-11-27 13:12:05,121 | INFO     | mean x: 1764226107.7513442
[2025-11-27 08:12:39] 2025-11-27 13:12:05,122 | INFO     | mean y: 3022682.2365591396
[2025-11-27 08:12:39] 2025-11-27 13:12:05,122 | INFO     | intersect: -17198121400.405163
[2025-11-27 08:12:39] 2025-11-27 13:12:05,122 | INFO     | chi2: 5.539600055111358
[2025-11-27 08:12:39] 2025-11-27 13:12:05,123 | INFO     | current chi2=5.539600055111358 (change=36.67011582686916 %)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,123 | INFO     | sum of square deviations: 125139086464.11679
[2025-11-27 08:12:39] 2025-11-27 13:12:05,133 | INFO     | sum of deviations: 1406669749643.5435
[2025-11-27 08:12:39] 2025-11-27 13:12:05,134 | INFO     | mean x: 1764225955.2598104
[2025-11-27 08:12:39] 2025-11-27 13:12:05,134 | INFO     | mean y: 3032310.0284167794
[2025-11-27 08:12:39] 2025-11-27 13:12:05,134 | INFO     | intersect: -19828367717.90429
[2025-11-27 08:12:39] 2025-11-27 13:12:05,135 | INFO     | chi2: 4.098215516037112
[2025-11-27 08:12:39] 2025-11-27 13:12:05,135 | INFO     | current chi2=4.098215516037112 (change=26.019649879674766 %)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,136 | INFO     | sum of square deviations: 122616239036.22469
[2025-11-27 08:12:39] 2025-11-27 13:12:05,146 | INFO     | sum of deviations: 1421843885790.626
[2025-11-27 08:12:39] 2025-11-27 13:12:05,146 | INFO     | mean x: 1764225802.764305
[2025-11-27 08:12:39] 2025-11-27 13:12:05,146 | INFO     | mean y: 3033220.5354223433
[2025-11-27 08:12:39] 2025-11-27 13:12:05,146 | INFO     | intersect: -20454727436.055992
[2025-11-27 08:12:39] 2025-11-27 13:12:05,147 | INFO     | chi2: 4.003892000256628
[2025-11-27 08:12:39] 2025-11-27 13:12:05,147 | INFO     | current chi2=4.003892000256628 (change=2.30157529323136 %)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,147 | INFO     | right removable region: 733
[2025-11-27 08:12:39] 2025-11-27 13:12:05,148 | INFO     | sum of square deviations: 127695603486.99887
[2025-11-27 08:12:39] 2025-11-27 13:12:05,159 | INFO     | sum of deviations: 698719909723.4591
[2025-11-27 08:12:39] 2025-11-27 13:12:05,159 | INFO     | mean x: 1764226412.7513442
[2025-11-27 08:12:39] 2025-11-27 13:12:05,159 | INFO     | mean y: 3023547.7916666665
[2025-11-27 08:12:39] 2025-11-27 13:12:05,159 | INFO     | intersect: -9650402930.394537
[2025-11-27 08:12:39] 2025-11-27 13:12:05,160 | INFO     | chi2: 5.41846926697011
[2025-11-27 08:12:39] 2025-11-27 13:12:05,160 | INFO     | current chi2=5.41846926697011 (change=38.05490871922013 %)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,161 | INFO     | sum of square deviations: 125138221847.18535
[2025-11-27 08:12:39] 2025-11-27 13:12:05,215 | INFO     | sum of deviations: 591686190546.208
[2025-11-27 08:12:39] 2025-11-27 13:12:05,215 | INFO     | mean x: 1764226565.2516916
[2025-11-27 08:12:39] 2025-11-27 13:12:05,215 | INFO     | mean y: 3029917.6332882275
[2025-11-27 08:12:39] 2025-11-27 13:12:05,215 | INFO     | intersect: -8338693979.713855
[2025-11-27 08:12:39] 2025-11-27 13:12:05,216 | INFO     | chi2: 4.867878991677792
[2025-11-27 08:12:39] 2025-11-27 13:12:05,216 | INFO     | current chi2=4.867878991677792 (change=10.161361967089212 %)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,216 | INFO     | left removable region: 20
[2025-11-27 08:12:39] 2025-11-27 13:12:05,217 | INFO     | sum of square deviations: 112389569875.66896
[2025-11-27 08:12:39] 2025-11-27 13:12:05,227 | INFO     | sum of deviations: 969459915730.6398
[2025-11-27 08:12:39] 2025-11-27 13:12:05,227 | INFO     | mean x: 1764226382.2734923
[2025-11-27 08:12:39] 2025-11-27 13:12:05,227 | INFO     | mean y: 3060696.991584853
[2025-11-27 08:12:39] 2025-11-27 13:12:05,227 | INFO     | intersect: -15214959638.709526
[2025-11-27 08:12:39] 2025-11-27 13:12:05,228 | INFO     | chi2: 0.04228411888369822
[2025-11-27 08:12:39] 2025-11-27 13:12:05,228 | INFO     | current memory leak: 8.63 B/s (using 713 data points, chi2=0.04)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,229 | INFO     | could have reported an average CPU frequency of 2787 MHz (28 samples)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,229 | INFO     | ..............................
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . Timing measurements:
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . get job = 0 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . initial setup = 5 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . payload setup = 31 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . stage-in = 0 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . payload execution = 45680 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . stage-out = 4 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | . log creation = 1 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,230 | INFO     | ..............................
[2025-11-27 08:12:39] 2025-11-27 13:12:05,989 | INFO     | 
[2025-11-27 08:12:39] 2025-11-27 13:12:05,989 | INFO     | job summary report
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | --------------------------------------------------
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | PanDA job id: 6897998768
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | task id: 47556161
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | errors: (none)
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | pilot state: finished 
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | transexitcode: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | exeerrorcode: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | exeerrordiag: 
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | exitcode: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | exitmsg: OK
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | cpuconsumptiontime: 248425 s
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | nevents: 1000
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | neventsw: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:05,990 | INFO     | pid: 1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | pgrp: 1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | corecount: 9
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | event service: False
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | sizes: {0: 2284093, 1: 2284121, 2: 2284292, 13: 2284320, 23: 2284638, 24: 2284666, 45716: 2330460, 45722: 2339454, 45725: 2339510, 45738: 2339756}
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | --------------------------------------------------
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | 
[2025-11-27 08:12:39] 2025-11-27 13:12:05,991 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | job 6897998768 has completed (purged errors)
[2025-11-27 08:12:39] 2025-11-27 13:12:06,207 | INFO     | overall cleanup function is called
[2025-11-27 08:12:39] 2025-11-27 13:12:07,237 | INFO     | --- collectZombieJob: --- 10, [1431627]
[2025-11-27 08:12:39] 2025-11-27 13:12:07,238 | INFO     | zombie collector waiting for pid 1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:07,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:12:39] 2025-11-27 13:12:07,242 | INFO     | collected zombie processes
[2025-11-27 08:12:39] 2025-11-27 13:12:07,242 | INFO     | will attempt to kill all subprocesses of pid=1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:08,571 | INFO     | process IDs to be killed: [1431627] (in reverse order)
[2025-11-27 08:12:39] 2025-11-27 13:12:08,788 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:12:39] 2025-11-27 13:12:08,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:12:39] 2025-11-27 13:12:08,816 | INFO     | did not find any defunct processes belonging to 1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:08,844 | INFO     | did not find any defunct processes belonging to 1431627
[2025-11-27 08:12:39] 2025-11-27 13:12:08,845 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:12:39] 2025-11-27 13:12:08,845 | INFO     | ready for new job
[2025-11-27 08:12:39] 2025-11-27 13:12:08,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:12:39] 2025-11-27 13:12:08,852 | INFO     | ***************************************
[2025-11-27 08:12:39] 2025-11-27 13:12:08,852 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:12:39] 2025-11-27 13:12:08,852 | INFO     | ***************************************
[2025-11-27 08:12:39] 2025-11-27 13:12:08,852 | INFO     | 
[2025-11-27 08:12:39] 2025-11-27 13:12:08,857 | INFO     | architecture information:
[2025-11-27 08:12:39] 2025-11-27 13:12:08,858 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:12:39] 2025-11-27 13:12:08,903 | INFO     | cat /etc/os-release:
[2025-11-27 08:12:39] NAME="CentOS Linux"
[2025-11-27 08:12:39] VERSION="7 (Core)"
[2025-11-27 08:12:39] ID="centos"
[2025-11-27 08:12:39] ID_LIKE="rhel fedora"
[2025-11-27 08:12:39] VERSION_ID="7"
[2025-11-27 08:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:12:39] ANSI_COLOR="0;31"
[2025-11-27 08:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:12:39] HOME_URL="https://www.centos.org/"
[2025-11-27 08:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:12:39] 
[2025-11-27 08:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:12:39] 
[2025-11-27 08:12:39] 2025-11-27 13:12:08,904 | INFO     | ***************************************
[2025-11-27 08:12:39] 2025-11-27 13:12:09,412 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 08:12:39] 2025-11-27 13:12:09,432 | INFO     | sufficient remaining disk space (66821554176 B)
[2025-11-27 08:12:39] 2025-11-27 13:12:09,433 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:12:39] 2025-11-27 13:12:09,433 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:12:39] 2025-11-27 13:12:09,433 | INFO     | update_server=False
[2025-11-27 08:12:39] 2025-11-27 13:12:09,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:12:39] 2025-11-27 13:12:09,558 | INFO     | all data control threads have been joined
[2025-11-27 08:12:39] 2025-11-27 13:12:09,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:12:39] 2025-11-27 13:12:09,703 | INFO     | aborting loop
[2025-11-27 08:12:39] 2025-11-27 13:12:10,159 | INFO     | all payload control threads have been joined
[2025-11-27 08:12:39] 2025-11-27 13:12:10,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:12:39] 2025-11-27 13:12:10,356 | INFO     | all job control threads have been joined
[2025-11-27 08:12:39] 2025-11-27 13:12:10,438 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:10,480 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:10,564 | INFO     | [data] control thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:10,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:12:39] 2025-11-27 13:12:10,592 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:10,708 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:10,874 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,108 | INFO     | [job] validate thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,177 | INFO     | [payload] control thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,181 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,198 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,217 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,364 | INFO     | [job] control thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:11,577 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:12,198 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:12,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:12:39] 2025-11-27 13:12:16,381 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:12:39] 2025-11-27 13:12:25,231 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:12:39] 2025-11-27 13:12:26,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734290794304)>', '<ExcThread(monitor, started 139733808183040)>']
[2025-11-27 08:12:39] 2025-11-27 13:12:31,710 | INFO     | all workflow threads have been joined
[2025-11-27 08:12:39] 2025-11-27 13:12:31,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:12:39] 2025-11-27 13:12:31,714 | INFO     | traces error code: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:31,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:12:39] 2025-11-27 13:12:38,939 | INFO     | PID=1421006 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:12:39] 2025-11-27 13:12:38,942 | INFO     | .. there are 80 such processes running
[2025-11-27 08:12:39] 2025-11-27 13:12:38,943 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:12:39] 2025-11-27 13:12:38,944 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:12:39] 2025-11-27 13:12:38,944 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:12:39] 2025-11-27 13:12:38,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:12:39] 2025-11-27 13:12:38,944 | INFO     | [monitor] control thread has ended
[2025-11-27 08:12:39] 2025-11-27 13:12:39,130 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:12:39] 2025-11-27 13:12:39,133 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:12:39] 2025-11-27 13:12:39,137 [wrapper] pilotpid: 1421006
[2025-11-27 08:12:39] 2025-11-27 13:12:39,139 [wrapper] Pilot exit status: 0
[2025-11-27 08:12:39] 2025-11-27 13:12:39,178 [wrapper] pandaids: 6897998768
[2025-11-27 08:12:39] 2025-11-27 13:12:39,321 [wrapper] cleanup supervisor_pilot 2350234 1421007
[2025-11-27 08:12:39] 2025-11-27 13:12:39,334 [wrapper] Test setup, not cleaning
[2025-11-27 08:12:39] 2025-11-27 13:12:39,337 [wrapper] apfmon messages muted
[2025-11-27 08:12:39] 2025-11-27 13:12:39,340 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:12:39] 2025-11-27 13:12:39,344 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:12:39]  *** Error codes and diagnostics ***
[2025-11-27 08:12:39]     "exeErrorCode": 0,
[2025-11-27 08:12:39]     "exeErrorDiag": "",
[2025-11-27 08:12:39]     "pilotErrorCode": 0,
[2025-11-27 08:12:39]     "pilotErrorDiag": "",
[2025-11-27 08:12:39]  *** Listing of results directory ***
[2025-11-27 08:12:39] total 1309328
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 08:12:39] -rwx------. 1 boincer umatlas     36292 Nov 25 21:32 runpilot2-wrapper.sh
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:32 queuedata.json
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:12:39] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:27 run_atlas
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:27 job.xml
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas 408368591 Nov 26 19:27 EVNT.47483658._002380.pool.root.1
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:27 start_atlas.sh
[2025-11-27 08:12:39] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:27 shared
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 19:27 input.tar.gz
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:27 boinc_lockfile
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 19:28 pandaJob.out
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas        57 Nov 26 19:28 setup.sh.local
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas    991546 Nov 26 19:28 agis_schedconf.cvmfs.json
[2025-11-27 08:12:39] drwx------. 5 boincer umatlas      4096 Nov 26 19:29 pilot3
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas       533 Nov 27 07:57 boinc_task_state.xml
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas      6884 Nov 27 08:10 init_data.xml
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas 913145537 Nov 27 08:10 HITS.47556161._003622.pool.root.1
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas      1060 Nov 27 08:11 memory_monitor_summary.json
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas   1516240 Nov 27 08:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas   2058250 Nov 27 08:11 log.47556161._003622.job.log.tgz.1
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas      8630 Nov 27 08:12 heartbeat.json
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 08:12 boinc_mmap_file
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas        29 Nov 27 08:12 wrapper_checkpoint.txt
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas       823 Nov 27 08:12 pilotlog.txt
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas        95 Nov 27 08:12 pilot_heartbeat.json
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas   5599523 Nov 27 08:12 log.47556161._003622.job.log.1
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas       353 Nov 27 08:12 output.list
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas       620 Nov 27 08:12 runtime_log
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas   7680000 Nov 27 08:12 result.tar.gz
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 08:12 runtime_log.err
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas       660 Nov 27 08:12 puvLDm0VKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIkMKDmOsxszm.diag
[2025-11-27 08:12:39] -rw-r--r--. 1 boincer umatlas     21159 Nov 27 08:12 stderr.txt
[2025-11-27 08:12:39] HITS file was successfully produced:
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas 913145537 Nov 27 08:10 shared/HITS.pool.root.1
[2025-11-27 08:12:39]  *** Contents of shared directory: ***
[2025-11-27 08:12:39] total 1298648
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas 408368591 Nov 26 19:27 ATLAS.root_0
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:27 start_atlas.sh
[2025-11-27 08:12:39] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 19:27 input.tar.gz
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas 913145537 Nov 27 08:10 HITS.pool.root.1
[2025-11-27 08:12:39] -rw-------. 1 boincer umatlas   7680000 Nov 27 08:12 result.tar.gz
08:12:40 (1412695): run_atlas exited; CPU time 250752.430073
08:12:40 (1412695): called boinc_finish(0)

</stderr_txt>
]]>

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