Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:04:09 (7561): wrapper (7.7.26015): starting
19:04:09 (7561): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:04:09] Arguments: --nthreads 8
[2025-11-26 19:04:09] Threads: 8
[2025-11-26 19:04:09] Checking for CVMFS
[2025-11-26 19:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:04:10] 2.11.2.0 8539 118411 145824 153340 2 90 14638290 18432001 1557 130560 0 89693178 99.975 4910426 31594 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 19:04:10] CVMFS is ok
[2025-11-26 19:04:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:04:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:04:10] Further information can be found at the LHC@home message board.
[2025-11-26 19:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:04:10] Checking for apptainer binary...
[2025-11-26 19:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:04:10] Running /usr/bin/apptainer --version
[2025-11-26 19:04:10] apptainer version 1.3.2-1.el7
[2025-11-26 19:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:04:11] c-206-1.aglt2.org
[2025-11-26 19:04:11] apptainer works
[2025-11-26 19:04:11] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:04:11] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:04:11] Starting ATLAS job with PandaID=6892547940
[2025-11-26 19:04:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:41:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:41:18] 2025-11-27 18:40:29,135 | INFO     | time since job start (66968s) is within the limit (172800.0s)
[2025-11-27 13:41:18] 2025-11-27 18:40:29,510 | INFO     | monitor loop #4787: job 0:6892547940 is in state 'finished'
[2025-11-27 13:41:18] 2025-11-27 18:40:29,511 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:41:18] 2025-11-27 18:40:29,883 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 13:41:18] 2025-11-27 18:40:29,889 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2450.1666666666665
[2025-11-27 13:41:18] 2025-11-27 18:40:29,894 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6892547940/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:41:18] 2025-11-27 18:40:29,894 | INFO     | extracted standard info from prmon json
[2025-11-27 13:41:18] 2025-11-27 18:40:29,895 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:41:18] 2025-11-27 18:40:29,895 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:41:18] 2025-11-27 18:40:29,924 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:41:18] 2025-11-27 18:40:29,925 | INFO     | sum of square deviations: 410472158086.2915
[2025-11-27 13:41:18] 2025-11-27 18:40:29,967 | INFO     | sum of deviations: 2056468399334.2876
[2025-11-27 13:41:18] 2025-11-27 18:40:29,967 | INFO     | mean x: 1764235345.0837886
[2025-11-27 13:41:18] 2025-11-27 18:40:29,967 | INFO     | mean y: 3097933.083788707
[2025-11-27 13:41:18] 2025-11-27 18:40:29,968 | INFO     | intersect: -8835733555.678762
[2025-11-27 13:41:18] 2025-11-27 18:40:29,969 | INFO     | chi2: 5.691573238296893
[2025-11-27 13:41:18] 2025-11-27 18:40:29,971 | INFO     | sum of square deviations: 404890286137.07965
[2025-11-27 13:41:18] 2025-11-27 18:40:30,011 | INFO     | sum of deviations: 2439252870776.0605
[2025-11-27 13:41:18] 2025-11-27 18:40:30,011 | INFO     | mean x: 1764235192.5864594
[2025-11-27 13:41:18] 2025-11-27 18:40:30,012 | INFO     | mean y: 3108386.396157365
[2025-11-27 13:41:18] 2025-11-27 18:40:30,012 | INFO     | intersect: -10625488805.445864
[2025-11-27 13:41:18] 2025-11-27 18:40:30,013 | INFO     | chi2: 2.677174230096246
[2025-11-27 13:41:18] 2025-11-27 18:40:30,014 | INFO     | current chi2=2.677174230096246 (change=52.96249177499216 %)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,015 | INFO     | sum of square deviations: 399359252350.35223
[2025-11-27 13:41:18] 2025-11-27 18:40:30,055 | INFO     | sum of deviations: 2556525326445.0796
[2025-11-27 13:41:18] 2025-11-27 18:40:30,056 | INFO     | mean x: 1764235040.0891545
[2025-11-27 13:41:18] 2025-11-27 18:40:30,056 | INFO     | mean y: 3111614.8033088236
[2025-11-27 13:41:18] 2025-11-27 18:40:30,056 | INFO     | intersect: -11290758591.64665
[2025-11-27 13:41:18] 2025-11-27 18:40:30,058 | INFO     | chi2: 2.22161429137661
[2025-11-27 13:41:18] 2025-11-27 18:40:30,058 | INFO     | current chi2=2.22161429137661 (change=17.016447177711637 %)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,058 | INFO     | right removable region: 1087
[2025-11-27 13:41:18] 2025-11-27 18:40:30,060 | INFO     | sum of square deviations: 404889895127.0796
[2025-11-27 13:41:18] 2025-11-27 18:40:30,101 | INFO     | sum of deviations: 1768619708483.9785
[2025-11-27 13:41:18] 2025-11-27 18:40:30,101 | INFO     | mean x: 1764235497.5864594
[2025-11-27 13:41:18] 2025-11-27 18:40:30,102 | INFO     | mean y: 3105785.957913998
[2025-11-27 13:41:18] 2025-11-27 18:40:30,102 | INFO     | intersect: -7703339124.106138
[2025-11-27 13:41:18] 2025-11-27 18:40:30,103 | INFO     | chi2: 3.7778417776363242
[2025-11-27 13:41:18] 2025-11-27 18:40:30,104 | INFO     | current chi2=3.7778417776363242 (change=33.62394509454157 %)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,105 | INFO     | sum of square deviations: 399358470330.35236
[2025-11-27 13:41:18] 2025-11-27 18:40:30,136 | INFO     | sum of deviations: 1680775431728.992
[2025-11-27 13:41:18] 2025-11-27 18:40:30,137 | INFO     | mean x: 1764235650.0891545
[2025-11-27 13:41:18] 2025-11-27 18:40:30,137 | INFO     | mean y: 3108207.185661765
[2025-11-27 13:41:18] 2025-11-27 18:40:30,137 | INFO     | intersect: -7422010218.36663
[2025-11-27 13:41:18] 2025-11-27 18:40:30,139 | INFO     | chi2: 3.6999565349578916
[2025-11-27 13:41:18] 2025-11-27 18:40:30,139 | INFO     | current chi2=3.6999565349578916 (change=2.0616332621310307 %)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,139 | INFO     | left removable region: 20
[2025-11-27 13:41:18] 2025-11-27 18:40:30,141 | INFO     | sum of square deviations: 376677512604.71014
[2025-11-27 13:41:18] 2025-11-27 18:40:30,179 | INFO     | sum of deviations: 2047943325640.7883
[2025-11-27 13:41:18] 2025-11-27 18:40:30,180 | INFO     | mean x: 1764235619.5970008
[2025-11-27 13:41:18] 2025-11-27 18:40:30,180 | INFO     | mean y: 3125635.9343955014
[2025-11-27 13:41:18] 2025-11-27 18:40:30,180 | INFO     | intersect: -9588778422.864573
[2025-11-27 13:41:18] 2025-11-27 18:40:30,182 | INFO     | chi2: 0.16700062236632343
[2025-11-27 13:41:18] 2025-11-27 18:40:30,182 | INFO     | current memory leak: 5.44 B/s (using 1067 data points, chi2=0.17)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,183 | INFO     | could have reported an average CPU frequency of 2602 MHz (40 samples)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,183 | INFO     | ..............................
[2025-11-27 13:41:18] 2025-11-27 18:40:30,183 | INFO     | . Timing measurements:
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . get job = 0 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . initial setup = 2 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . payload setup = 6 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . stage-in = 0 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . payload execution = 66933 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,184 | INFO     | . stage-out = 3 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,185 | INFO     | . log creation = 0 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,185 | INFO     | ..............................
[2025-11-27 13:41:18] 2025-11-27 18:40:30,324 | INFO     | 
[2025-11-27 13:41:18] 2025-11-27 18:40:30,324 | INFO     | job summary report
[2025-11-27 13:41:18] 2025-11-27 18:40:30,324 | INFO     | --------------------------------------------------
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | PanDA job id: 6892547940
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | task id: 47493029
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | errors: (none)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | pilot state: finished 
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | transexitcode: 0
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | exeerrorcode: 0
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | exeerrordiag: 
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | exitcode: 0
[2025-11-27 13:41:18] 2025-11-27 18:40:30,325 | INFO     | exitmsg: OK
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | cpuconsumptiontime: 524024 s
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | nevents: 1000
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | neventsw: 0
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | pid: 18806
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | pgrp: 18806
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | corecount: 8
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | event service: False
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | sizes: {0: 2283476, 1: 2284332, 4: 2284594, 12: 2284622, 66943: 2340084, 66948: 2349106, 66950: 2349290, 66954: 2349536}
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | --------------------------------------------------
[2025-11-27 13:41:18] 2025-11-27 18:40:30,326 | INFO     | 
[2025-11-27 13:41:18] 2025-11-27 18:40:30,327 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 13:41:18] 2025-11-27 18:40:30,341 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,341 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,341 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,341 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,342 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:41:18] 2025-11-27 18:40:30,343 | INFO     | job 6892547940 has completed (purged errors)
[2025-11-27 13:41:18] 2025-11-27 18:40:30,344 | INFO     | overall cleanup function is called
[2025-11-27 13:41:18] 2025-11-27 18:40:31,356 | INFO     | --- collectZombieJob: --- 10, [18806]
[2025-11-27 13:41:18] 2025-11-27 18:40:31,356 | INFO     | zombie collector waiting for pid 18806
[2025-11-27 13:41:18] 2025-11-27 18:40:31,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:41:18] 2025-11-27 18:40:31,369 | INFO     | collected zombie processes
[2025-11-27 13:41:18] 2025-11-27 18:40:31,370 | INFO     | will attempt to kill all subprocesses of pid=18806
[2025-11-27 13:41:18] 2025-11-27 18:40:31,529 | INFO     | process IDs to be killed: [18806] (in reverse order)
[2025-11-27 13:41:18] 2025-11-27 18:40:31,577 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:41:18] 2025-11-27 18:40:31,577 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:41:18] 2025-11-27 18:40:31,582 | INFO     | did not find any defunct processes belonging to 18806
[2025-11-27 13:41:18] 2025-11-27 18:40:31,587 | INFO     | did not find any defunct processes belonging to 18806
[2025-11-27 13:41:18] 2025-11-27 18:40:31,589 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:41:18] 2025-11-27 18:40:31,589 | INFO     | ready for new job
[2025-11-27 13:41:18] 2025-11-27 18:40:31,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:41:18] 2025-11-27 18:40:31,594 | INFO     | ***************************************
[2025-11-27 13:41:18] 2025-11-27 18:40:31,594 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:41:18] 2025-11-27 18:40:31,594 | INFO     | ***************************************
[2025-11-27 13:41:18] 2025-11-27 18:40:31,594 | INFO     | 
[2025-11-27 13:41:18] 2025-11-27 18:40:31,595 | INFO     | architecture information:
[2025-11-27 13:41:18] 2025-11-27 18:40:31,596 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:41:18] 2025-11-27 18:40:31,610 | INFO     | cat /etc/os-release:
[2025-11-27 13:41:18] NAME="CentOS Linux"
[2025-11-27 13:41:18] VERSION="7 (Core)"
[2025-11-27 13:41:18] ID="centos"
[2025-11-27 13:41:18] ID_LIKE="rhel fedora"
[2025-11-27 13:41:18] VERSION_ID="7"
[2025-11-27 13:41:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:41:18] ANSI_COLOR="0;31"
[2025-11-27 13:41:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:41:18] HOME_URL="https://www.centos.org/"
[2025-11-27 13:41:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:41:18] 
[2025-11-27 13:41:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:41:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:41:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:41:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:41:18] 
[2025-11-27 13:41:18] 2025-11-27 18:40:31,610 | INFO     | ***************************************
[2025-11-27 13:41:18] 2025-11-27 18:40:32,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 13:41:18] 2025-11-27 18:40:32,131 | INFO     | sufficient remaining disk space (24935137280 B)
[2025-11-27 13:41:18] 2025-11-27 18:40:32,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:41:18] 2025-11-27 18:40:32,132 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:41:18] 2025-11-27 18:40:32,132 | INFO     | update_server=False
[2025-11-27 13:41:18] 2025-11-27 18:40:32,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:41:18] 2025-11-27 18:40:32,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:41:18] 2025-11-27 18:40:32,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:41:18] 2025-11-27 18:40:32,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:41:18] 2025-11-27 18:40:32,761 | INFO     | all data control threads have been joined
[2025-11-27 13:41:18] 2025-11-27 18:40:32,824 | INFO     | all job control threads have been joined
[2025-11-27 13:41:18] 2025-11-27 18:40:33,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:41:18] 2025-11-27 18:40:33,021 | INFO     | aborting loop
[2025-11-27 13:41:18] 2025-11-27 18:40:33,133 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,139 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,199 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,310 | INFO     | all payload control threads have been joined
[2025-11-27 13:41:18] 2025-11-27 18:40:33,628 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,766 | INFO     | [data] control thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,829 | INFO     | [job] control thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:33,989 | INFO     | [job] validate thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,026 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,047 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,116 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,139 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,316 | INFO     | [payload] control thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,372 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:34,624 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:40:36,139 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:41:18] 2025-11-27 18:41:02,351 | INFO     | PID=11269 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 13:41:18] 2025-11-27 18:41:02,352 | INFO     | .. there are 3 such processes running
[2025-11-27 13:41:18] 2025-11-27 18:41:02,353 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:41:18] 2025-11-27 18:41:02,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:41:18] 2025-11-27 18:41:02,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:41:18] 2025-11-27 18:41:12,297 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:41:18] 2025-11-27 18:41:12,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566059272000)>', '<ExcThread(monitor, started 140565832283904)>']
[2025-11-27 13:41:18] 2025-11-27 18:41:13,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:41:18] 2025-11-27 18:41:13,412 | INFO     | [monitor] control thread has ended
[2025-11-27 13:41:18] 2025-11-27 18:41:17,735 | INFO     | all workflow threads have been joined
[2025-11-27 13:41:18] 2025-11-27 18:41:17,735 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:41:18] 2025-11-27 18:41:17,735 | INFO     | traces error code: 0
[2025-11-27 13:41:18] 2025-11-27 18:41:17,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:41:18] 2025-11-27 18:41:17,860 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:41:18] 2025-11-27 18:41:17,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:41:18] 2025-11-27 18:41:17,865 [wrapper] pilotpid: 11269
[2025-11-27 13:41:18] 2025-11-27 18:41:17,868 [wrapper] Pilot exit status: 0
[2025-11-27 13:41:18] 2025-11-27 18:41:17,896 [wrapper] pandaids: 6892547940
[2025-11-27 13:41:18] 2025-11-27 18:41:17,927 [wrapper] cleanup supervisor_pilot 14377 11270
[2025-11-27 13:41:18] 2025-11-27 18:41:17,929 [wrapper] Test setup, not cleaning
[2025-11-27 13:41:18] 2025-11-27 18:41:17,932 [wrapper] apfmon messages muted
[2025-11-27 13:41:18] 2025-11-27 18:41:17,935 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:41:18] 2025-11-27 18:41:17,937 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:41:18]  *** Error codes and diagnostics ***
[2025-11-27 13:41:18]     "exeErrorCode": 0,
[2025-11-27 13:41:18]     "exeErrorDiag": "",
[2025-11-27 13:41:18]     "pilotErrorCode": 0,
[2025-11-27 13:41:18]     "pilotErrorDiag": "",
[2025-11-27 13:41:18]  *** Listing of results directory ***
[2025-11-27 13:41:18] total 1328808
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-27 13:41:18] -rwx------ 1 boincer umatlas     36292 Nov 19 03:35 runpilot2-wrapper.sh
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:35 queuedata.json
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas       100 Nov 26 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:41:18] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 19:04 run_atlas
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas       105 Nov 26 19:04 job.xml
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas 410361302 Nov 26 19:04 EVNT.47493027._000324.pool.root.1
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 19:04 start_atlas.sh
[2025-11-27 13:41:18] drwxrwx--x 2 boincer umatlas      4096 Nov 26 19:04 shared
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 19:04 input.tar.gz
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas         0 Nov 26 19:04 boinc_lockfile
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 19:04 pandaJob.out
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas    991538 Nov 26 19:04 agis_schedconf.cvmfs.json
[2025-11-27 13:41:18] drwx------ 5 boincer umatlas      4096 Nov 26 19:04 pilot3
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas       533 Nov 27 13:30 boinc_task_state.xml
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas      5953 Nov 27 13:38 init_data.xml
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas 923262102 Nov 27 13:39 HITS.47493029._003193.pool.root.1
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas      1081 Nov 27 13:40 memory_monitor_summary.json
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas   1516240 Nov 27 13:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas   2295162 Nov 27 13:40 log.47493029._003193.job.log.tgz.1
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas      8664 Nov 27 13:40 heartbeat.json
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 13:40 boinc_mmap_file
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas        29 Nov 27 13:40 wrapper_checkpoint.txt
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas        95 Nov 27 13:41 pilot_heartbeat.json
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas      4821 Nov 27 13:41 pilotlog.txt
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas   9282184 Nov 27 13:41 log.47493029._003193.job.log.1
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas       353 Nov 27 13:41 output.list
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas       620 Nov 27 13:41 runtime_log
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas  11601920 Nov 27 13:41 result.tar.gz
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas      8699 Nov 27 13:41 runtime_log.err
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas       666 Nov 27 13:41 pRSNDmLqsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH4GKDmn2WuBn.diag
[2025-11-27 13:41:18] -rw-r--r-- 1 boincer umatlas     21308 Nov 27 13:41 stderr.txt
[2025-11-27 13:41:18] HITS file was successfully produced:
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas 923262102 Nov 27 13:39 shared/HITS.pool.root.1
[2025-11-27 13:41:18]  *** Contents of shared directory: ***
[2025-11-27 13:41:18] total 1314300
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas 410361302 Nov 26 19:04 ATLAS.root_0
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 19:04 start_atlas.sh
[2025-11-27 13:41:18] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 19:04 input.tar.gz
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas 923262102 Nov 27 13:39 HITS.pool.root.1
[2025-11-27 13:41:18] -rw------- 1 boincer umatlas  11601920 Nov 27 13:41 result.tar.gz
13:41:19 (7561): run_atlas exited; CPU time 523681.239125
13:41:19 (7561): called boinc_finish(0)

</stderr_txt>
]]>

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