Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:11 (9018): wrapper (7.7.26015): starting
18:28:11 (9018): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:28:11] Arguments: --nthreads 8
[2025-11-26 18:28:11] Threads: 8
[2025-11-26 18:28:11] Checking for CVMFS
[2025-11-26 18:28:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:28:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:28:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:28:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:28:12] 2.11.2.0 2888 49524 82292 153340 2 82 18338288 20275200 1 130560 0 9293939 99.793 2757433 29587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:28:12] CVMFS is ok
[2025-11-26 18:28:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:28:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:28:12] Further information can be found at the LHC@home message board.
[2025-11-26 18:28:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:28:12] Checking for apptainer binary...
[2025-11-26 18:28:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:28:12] Running /usr/bin/apptainer --version
[2025-11-26 18:28:12] apptainer version 1.3.2-1.el7
[2025-11-26 18:28:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:28:13] c-204-6.aglt2.org
[2025-11-26 18:28:13] apptainer works
[2025-11-26 18:28:13] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:28:13] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:28:14] Starting ATLAS job with PandaID=6892522634
[2025-11-26 18:28:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:47:00]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:47:00] 2025-11-27 11:46:25,140 | INFO     | time since job start (44274s) is within the limit (172800.0s)
[2025-11-27 06:47:00] 2025-11-27 11:46:27,147 | INFO     | time since job start (44276s) is within the limit (172800.0s)
[2025-11-27 06:47:00] 2025-11-27 11:46:27,247 | INFO     | monitor loop #3257: job 0:6892522634 is in state 'finished'
[2025-11-27 06:47:00] 2025-11-27 11:46:27,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,902 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 06:47:00] 2025-11-27 11:46:28,909 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-27 06:47:00] 2025-11-27 11:46:28,912 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892522634/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,913 | INFO     | extracted standard info from prmon json
[2025-11-27 06:47:00] 2025-11-27 11:46:28,913 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:47:00] 2025-11-27 11:46:28,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:47:00] 2025-11-27 11:46:28,926 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:47:00] 2025-11-27 11:46:28,927 | INFO     | sum of square deviations: 118655655857.4114
[2025-11-27 06:47:00] 2025-11-27 11:46:28,938 | INFO     | sum of deviations: 667828246540.1141
[2025-11-27 06:47:00] 2025-11-27 11:46:28,938 | INFO     | mean x: 1764221856.1556473
[2025-11-27 06:47:00] 2025-11-27 11:46:28,938 | INFO     | mean y: 3169337.6184573
[2025-11-27 06:47:00] 2025-11-27 11:46:28,939 | INFO     | intersect: -9926379997.307571
[2025-11-27 06:47:00] 2025-11-27 11:46:28,939 | INFO     | chi2: 6.4226179754549735
[2025-11-27 06:47:00] 2025-11-27 11:46:28,940 | INFO     | sum of square deviations: 116221085617.74747
[2025-11-27 06:47:00] 2025-11-27 11:46:28,951 | INFO     | sum of deviations: 966039039251.9036
[2025-11-27 06:47:00] 2025-11-27 11:46:28,952 | INFO     | mean x: 1764221703.6601942
[2025-11-27 06:47:00] 2025-11-27 11:46:28,952 | INFO     | mean y: 3188018.693481276
[2025-11-27 06:47:00] 2025-11-27 11:46:28,952 | INFO     | intersect: -14661165102.535625
[2025-11-27 06:47:00] 2025-11-27 11:46:28,953 | INFO     | chi2: 2.6302718036935997
[2025-11-27 06:47:00] 2025-11-27 11:46:28,953 | INFO     | current chi2=2.6302718036935997 (change=59.04673431075008 %)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,954 | INFO     | sum of square deviations: 113820050890.55197
[2025-11-27 06:47:00] 2025-11-27 11:46:28,964 | INFO     | sum of deviations: 1036615170487.6179
[2025-11-27 06:47:00] 2025-11-27 11:46:28,964 | INFO     | mean x: 1764221551.1648045
[2025-11-27 06:47:00] 2025-11-27 11:46:28,965 | INFO     | mean y: 3192490.087988827
[2025-11-27 06:47:00] 2025-11-27 11:46:28,965 | INFO     | intersect: -16064440670.585997
[2025-11-27 06:47:00] 2025-11-27 11:46:28,965 | INFO     | chi2: 2.2441418147493066
[2025-11-27 06:47:00] 2025-11-27 11:46:28,966 | INFO     | current chi2=2.2441418147493066 (change=14.68023146513087 %)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,966 | INFO     | right removable region: 715
[2025-11-27 06:47:00] 2025-11-27 11:46:28,966 | INFO     | sum of square deviations: 116220795257.7475
[2025-11-27 06:47:00] 2025-11-27 11:46:28,977 | INFO     | sum of deviations: 455415060173.86426
[2025-11-27 06:47:00] 2025-11-27 11:46:28,977 | INFO     | mean x: 1764222008.6601942
[2025-11-27 06:47:00] 2025-11-27 11:46:28,978 | INFO     | mean y: 3182619.542302358
[2025-11-27 06:47:00] 2025-11-27 11:46:28,978 | INFO     | intersect: -6909980127.728421
[2025-11-27 06:47:00] 2025-11-27 11:46:28,979 | INFO     | chi2: 4.309264207862433
[2025-11-27 06:47:00] 2025-11-27 11:46:28,979 | INFO     | current chi2=4.309264207862433 (change=32.904864895733304 %)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,979 | INFO     | sum of square deviations: 113819513907.88148
[2025-11-27 06:47:00] 2025-11-27 11:46:28,990 | INFO     | sum of deviations: 413862345252.8685
[2025-11-27 06:47:00] 2025-11-27 11:46:28,990 | INFO     | mean x: 1764222161.1634078
[2025-11-27 06:47:00] 2025-11-27 11:46:28,991 | INFO     | mean y: 3185257.086592179
[2025-11-27 06:47:00] 2025-11-27 11:46:28,991 | INFO     | intersect: -6411752710.027788
[2025-11-27 06:47:00] 2025-11-27 11:46:28,991 | INFO     | chi2: 4.272742965505904
[2025-11-27 06:47:00] 2025-11-27 11:46:28,992 | INFO     | current chi2=4.272742965505904 (change=0.8475052954491527 %)
[2025-11-27 06:47:00] 2025-11-27 11:46:28,992 | INFO     | left removable region: 20
[2025-11-27 06:47:00] 2025-11-27 11:46:28,992 | INFO     | sum of square deviations: 104095847208.8573
[2025-11-27 06:47:00] 2025-11-27 11:46:29,002 | INFO     | sum of deviations: 730400730822.9811
[2025-11-27 06:47:00] 2025-11-27 11:46:29,003 | INFO     | mean x: 1764222130.6733813
[2025-11-27 06:47:00] 2025-11-27 11:46:29,003 | INFO     | mean y: 3211865.361151079
[2025-11-27 06:47:00] 2025-11-27 11:46:29,003 | INFO     | intersect: -12375659800.791842
[2025-11-27 06:47:00] 2025-11-27 11:46:29,004 | INFO     | chi2: 0.05441445590269187
[2025-11-27 06:47:00] 2025-11-27 11:46:29,004 | INFO     | current memory leak: 7.02 B/s (using 695 data points, chi2=0.05)
[2025-11-27 06:47:00] 2025-11-27 11:46:29,004 | INFO     | could have reported an average CPU frequency of 2168 MHz (28 samples)
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | ..............................
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . Timing measurements:
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . get job = 0 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . initial setup = 2 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . payload setup = 8 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . stage-in = 0 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . payload execution = 44233 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,005 | INFO     | . stage-out = 4 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,006 | INFO     | . log creation = 0 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,006 | INFO     | ..............................
[2025-11-27 06:47:00] 2025-11-27 11:46:29,100 | INFO     | 
[2025-11-27 06:47:00] 2025-11-27 11:46:29,101 | INFO     | job summary report
[2025-11-27 06:47:00] 2025-11-27 11:46:29,101 | INFO     | --------------------------------------------------
[2025-11-27 06:47:00] 2025-11-27 11:46:29,101 | INFO     | PanDA job id: 6892522634
[2025-11-27 06:47:00] 2025-11-27 11:46:29,101 | INFO     | task id: 47493029
[2025-11-27 06:47:00] 2025-11-27 11:46:29,101 | INFO     | errors: (none)
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | pilot state: finished 
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | transexitcode: 0
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | exeerrorcode: 0
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | exeerrordiag: 
[2025-11-27 06:47:00] 2025-11-27 11:46:29,102 | INFO     | exitcode: 0
[2025-11-27 06:47:00] 2025-11-27 11:46:29,103 | INFO     | exitmsg: OK
[2025-11-27 06:47:00] 2025-11-27 11:46:29,103 | INFO     | cpuconsumptiontime: 343838 s
[2025-11-27 06:47:00] 2025-11-27 11:46:29,103 | INFO     | nevents: 1000
[2025-11-27 06:47:00] 2025-11-27 11:46:29,103 | INFO     | neventsw: 0
[2025-11-27 06:47:00] 2025-11-27 11:46:29,103 | INFO     | pid: 20169
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | pgrp: 20169
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | corecount: 8
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | event service: False
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | sizes: {0: 2284300, 6: 2284562, 11: 2284590, 44246: 2330222, 44250: 2339216, 44251: 2339272, 44260: 2339646}
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | --------------------------------------------------
[2025-11-27 06:47:00] 2025-11-27 11:46:29,104 | INFO     | 
[2025-11-27 06:47:00] 2025-11-27 11:46:29,105 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 06:47:00] 2025-11-27 11:46:29,137 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:47:00] 2025-11-27 11:46:29,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:47:00] 2025-11-27 11:46:29,142 | INFO     | job 6892522634 has completed (purged errors)
[2025-11-27 06:47:00] 2025-11-27 11:46:29,143 | INFO     | overall cleanup function is called
[2025-11-27 06:47:00] 2025-11-27 11:46:30,157 | INFO     | --- collectZombieJob: --- 10, [20169]
[2025-11-27 06:47:00] 2025-11-27 11:46:30,157 | INFO     | zombie collector waiting for pid 20169
[2025-11-27 06:47:00] 2025-11-27 11:46:30,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:47:00] 2025-11-27 11:46:30,164 | INFO     | collected zombie processes
[2025-11-27 06:47:00] 2025-11-27 11:46:30,164 | INFO     | will attempt to kill all subprocesses of pid=20169
[2025-11-27 06:47:00] 2025-11-27 11:46:30,256 | INFO     | process IDs to be killed: [20169] (in reverse order)
[2025-11-27 06:47:00] 2025-11-27 11:46:30,316 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:47:00] 2025-11-27 11:46:30,316 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:47:00] 2025-11-27 11:46:30,320 | INFO     | did not find any defunct processes belonging to 20169
[2025-11-27 06:47:00] 2025-11-27 11:46:30,322 | INFO     | did not find any defunct processes belonging to 20169
[2025-11-27 06:47:00] 2025-11-27 11:46:30,325 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:47:00] 2025-11-27 11:46:30,325 | INFO     | ready for new job
[2025-11-27 06:47:00] 2025-11-27 11:46:30,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:47:00] 2025-11-27 11:46:30,329 | INFO     | ***************************************
[2025-11-27 06:47:00] 2025-11-27 11:46:30,329 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:47:00] 2025-11-27 11:46:30,329 | INFO     | ***************************************
[2025-11-27 06:47:00] 2025-11-27 11:46:30,330 | INFO     | 
[2025-11-27 06:47:00] 2025-11-27 11:46:30,330 | INFO     | architecture information:
[2025-11-27 06:47:00] 2025-11-27 11:46:30,331 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:47:00] 2025-11-27 11:46:30,351 | INFO     | cat /etc/os-release:
[2025-11-27 06:47:00] NAME="CentOS Linux"
[2025-11-27 06:47:00] VERSION="7 (Core)"
[2025-11-27 06:47:00] ID="centos"
[2025-11-27 06:47:00] ID_LIKE="rhel fedora"
[2025-11-27 06:47:00] VERSION_ID="7"
[2025-11-27 06:47:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:47:00] ANSI_COLOR="0;31"
[2025-11-27 06:47:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:47:00] HOME_URL="https://www.centos.org/"
[2025-11-27 06:47:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:47:00] 
[2025-11-27 06:47:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:47:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:47:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:47:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:47:00] 
[2025-11-27 06:47:00] 2025-11-27 11:46:30,352 | INFO     | ***************************************
[2025-11-27 06:47:00] 2025-11-27 11:46:30,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 06:47:00] 2025-11-27 11:46:30,876 | INFO     | sufficient remaining disk space (17470324736 B)
[2025-11-27 06:47:00] 2025-11-27 11:46:30,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:47:00] 2025-11-27 11:46:30,877 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:47:00] 2025-11-27 11:46:30,877 | INFO     | update_server=False
[2025-11-27 06:47:00] 2025-11-27 11:46:30,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:47:00] 2025-11-27 11:46:30,878 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:47:00] 2025-11-27 11:46:30,878 | INFO     | aborting loop
[2025-11-27 06:47:00] 2025-11-27 11:46:30,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:47:00] 2025-11-27 11:46:30,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:47:00] 2025-11-27 11:46:31,607 | INFO     | all data control threads have been joined
[2025-11-27 06:47:00] 2025-11-27 11:46:31,724 | INFO     | all job control threads have been joined
[2025-11-27 06:47:00] 2025-11-27 11:46:31,793 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:47:00] 2025-11-27 11:46:31,883 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:31,884 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:31,884 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,006 | INFO     | all payload control threads have been joined
[2025-11-27 06:47:00] 2025-11-27 11:46:32,133 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,454 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,458 | INFO     | [job] validate thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,487 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,612 | INFO     | [data] control thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,648 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,729 | INFO     | [job] control thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:32,856 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:33,012 | INFO     | [payload] control thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:33,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:33,314 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:33,799 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:34,885 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:47:00] 2025-11-27 11:46:44,126 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:47:00] 2025-11-27 11:46:44,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140073188276032)>', '<ExcThread(monitor, started 140072749876992)>']
[2025-11-27 06:47:00] 2025-11-27 11:46:49,506 | INFO     | all workflow threads have been joined
[2025-11-27 06:47:00] 2025-11-27 11:46:49,506 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:47:00] 2025-11-27 11:46:49,507 | INFO     | traces error code: 0
[2025-11-27 06:47:00] 2025-11-27 11:46:49,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:47:00] 2025-11-27 11:47:00,277 | INFO     | PID=12790 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 06:47:00] 2025-11-27 11:47:00,279 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:47:00] 2025-11-27 11:47:00,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:47:00] 2025-11-27 11:47:00,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:47:00] 2025-11-27 11:47:00,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:47:00] 2025-11-27 11:47:00,279 | INFO     | [monitor] control thread has ended
[2025-11-27 06:47:00] 2025-11-27 11:47:00,412 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:47:00] 2025-11-27 11:47:00,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:47:00] 2025-11-27 11:47:00,423 [wrapper] pilotpid: 12790
[2025-11-27 06:47:00] 2025-11-27 11:47:00,427 [wrapper] Pilot exit status: 0
[2025-11-27 06:47:00] 2025-11-27 11:47:00,446 [wrapper] pandaids: 6892522634
[2025-11-27 06:47:00] 2025-11-27 11:47:00,492 [wrapper] cleanup supervisor_pilot  6246 12791
[2025-11-27 06:47:00] 2025-11-27 11:47:00,498 [wrapper] Test setup, not cleaning
[2025-11-27 06:47:00] 2025-11-27 11:47:00,503 [wrapper] apfmon messages muted
[2025-11-27 06:47:00] 2025-11-27 11:47:00,508 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:47:00] 2025-11-27 11:47:00,512 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:47:00]  *** Error codes and diagnostics ***
[2025-11-27 06:47:00]     "exeErrorCode": 0,
[2025-11-27 06:47:00]     "exeErrorDiag": "",
[2025-11-27 06:47:00]     "pilotErrorCode": 0,
[2025-11-27 06:47:00]     "pilotErrorDiag": "",
[2025-11-27 06:47:00]  *** Listing of results directory ***
[2025-11-27 06:47:00] total 1315680
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:02 queuedata.json
[2025-11-27 06:47:00] -rwx------ 1 boincer umatlas     36292 Nov 19 02:02 runpilot2-wrapper.sh
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:47:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:28 run_atlas
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:28 job.xml
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas 410982599 Nov 26 18:28 EVNT.47493027._000048.pool.root.1
[2025-11-27 06:47:00] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:28 shared
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas    590095 Nov 26 18:28 input.tar.gz
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 18:28 start_atlas.sh
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:28 boinc_lockfile
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas      2771 Nov 26 18:28 pandaJob.out
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas    991538 Nov 26 18:28 agis_schedconf.cvmfs.json
[2025-11-27 06:47:00] drwx------ 5 boincer umatlas      4096 Nov 26 18:28 pilot3
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas       532 Nov 27 06:36 boinc_task_state.xml
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 06:45 init_data.xml
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas 916244529 Nov 27 06:45 HITS.47493029._000432.pool.root.1
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas      1074 Nov 27 06:46 memory_monitor_summary.json
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas   1516240 Nov 27 06:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas   1964130 Nov 27 06:46 log.47493029._000432.job.log.tgz.1
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas      8656 Nov 27 06:46 heartbeat.json
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:46 wrapper_checkpoint.txt
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:46 boinc_mmap_file
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas        95 Nov 27 06:47 pilot_heartbeat.json
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas       745 Nov 27 06:47 pilotlog.txt
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas   6092203 Nov 27 06:47 log.47493029._000432.job.log.1
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas       353 Nov 27 06:47 output.list
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:47 runtime_log
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas   8079360 Nov 27 06:47 result.tar.gz
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas      8699 Nov 27 06:47 runtime_log.err
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas       667 Nov 27 06:47 bYDMDmKOrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEZGKDmDYxz6m.diag
[2025-11-27 06:47:00] -rw-r--r-- 1 boincer umatlas     21297 Nov 27 06:47 stderr.txt
[2025-11-27 06:47:00] HITS file was successfully produced:
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas 916244529 Nov 27 06:45 shared/HITS.pool.root.1
[2025-11-27 06:47:00]  *** Contents of shared directory: ***
[2025-11-27 06:47:00] total 1304616
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas 410982599 Nov 26 18:28 ATLAS.root_0
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas    590095 Nov 26 18:28 input.tar.gz
[2025-11-27 06:47:00] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 18:28 start_atlas.sh
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas 916244529 Nov 27 06:45 HITS.pool.root.1
[2025-11-27 06:47:00] -rw------- 1 boincer umatlas   8079360 Nov 27 06:47 result.tar.gz
06:47:02 (9018): run_atlas exited; CPU time 341602.660583
06:47:02 (9018): called boinc_finish(0)

</stderr_txt>
]]>

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