Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:40:40 (2623564): wrapper (7.7.26015): starting
18:40:40 (2623564): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 18:40:40] Arguments: --nthreads 9
[2025-11-26 18:40:40] Threads: 9
[2025-11-26 18:40:40] Checking for CVMFS
[2025-11-26 18:40:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:40:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:40:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:40:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:40:41] 2.13.3.0 9239 30675 344424 153340 2 369 18944770 32935937 23591 16776704 0 114902871 99.512 137899011 37790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:40:41] CVMFS is ok
[2025-11-26 18:40:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:40:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:40:41] Further information can be found at the LHC@home message board.
[2025-11-26 18:40:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:40:41] Checking for apptainer binary...
[2025-11-26 18:40:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:40:41] Running /usr/bin/apptainer --version
[2025-11-26 18:40:41] apptainer version 1.4.4-1.el9
[2025-11-26 18:40:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:40:41] c6-6-39-3.aglt2.org
[2025-11-26 18:40:41] apptainer works
[2025-11-26 18:40:42] Set ATHENA_PROC_NUMBER=9
[2025-11-26 18:40:42] Set ATHENA_CORE_NUMBER=9
[2025-11-26 18:40:42] Starting ATLAS job with PandaID=6897881265
[2025-11-26 18:40:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:56:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:56:56] 2025-11-27 14:56:10,004 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 09:56:56] 2025-11-27 14:56:10,017 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2924.1404821428564
[2025-11-27 09:56:56] 2025-11-27 14:56:10,028 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897881265/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,028 | INFO     | extracted standard info from prmon json
[2025-11-27 09:56:56] 2025-11-27 14:56:10,029 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:56:56] 2025-11-27 14:56:10,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:56:56] 2025-11-27 14:56:10,044 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:56:56] 2025-11-27 14:56:10,046 | INFO     | sum of square deviations: 225302092040.92557
[2025-11-27 09:56:56] 2025-11-27 14:56:10,067 | INFO     | sum of deviations: 1362032239668.4426
[2025-11-27 09:56:56] 2025-11-27 14:56:10,067 | INFO     | mean x: 1764227930.6484983
[2025-11-27 09:56:56] 2025-11-27 14:56:10,067 | INFO     | mean y: 3070500.659621802
[2025-11-27 09:56:56] 2025-11-27 14:56:10,068 | INFO     | intersect: -10662322341.011412
[2025-11-27 09:56:56] 2025-11-27 14:56:10,074 | INFO     | chi2: 11.346809512398066
[2025-11-27 09:56:56] 2025-11-27 14:56:10,075 | INFO     | sum of square deviations: 221564269294.76172
[2025-11-27 09:56:56] 2025-11-27 14:56:10,105 | INFO     | sum of deviations: 1718376556326.1177
[2025-11-27 09:56:56] 2025-11-27 14:56:10,106 | INFO     | mean x: 1764227778.1577182
[2025-11-27 09:56:56] 2025-11-27 14:56:10,106 | INFO     | mean y: 3085033.389261745
[2025-11-27 09:56:56] 2025-11-27 14:56:10,110 | INFO     | intersect: -13679661122.63641
[2025-11-27 09:56:56] 2025-11-27 14:56:10,111 | INFO     | chi2: 7.418337208836685
[2025-11-27 09:56:56] 2025-11-27 14:56:10,112 | INFO     | current chi2=7.418337208836685 (change=34.621822982653796 %)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,113 | INFO     | sum of square deviations: 217868028723.44464
[2025-11-27 09:56:56] 2025-11-27 14:56:10,144 | INFO     | sum of deviations: 2077688514438.9375
[2025-11-27 09:56:56] 2025-11-27 14:56:10,145 | INFO     | mean x: 1764227625.6670415
[2025-11-27 09:56:56] 2025-11-27 14:56:10,145 | INFO     | mean y: 3099859.1856017997
[2025-11-27 09:56:56] 2025-11-27 14:56:10,145 | INFO     | intersect: -16821376389.95322
[2025-11-27 09:56:56] 2025-11-27 14:56:10,151 | INFO     | chi2: 3.5835418343223298
[2025-11-27 09:56:56] 2025-11-27 14:56:10,151 | INFO     | current chi2=3.5835418343223298 (change=51.69346265287545 %)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,152 | INFO     | sum of square deviations: 214213029677.1717
[2025-11-27 09:56:56] 2025-11-27 14:56:10,175 | INFO     | sum of deviations: 2200451717933.066
[2025-11-27 09:56:56] 2025-11-27 14:56:10,175 | INFO     | mean x: 1764227473.1742082
[2025-11-27 09:56:56] 2025-11-27 14:56:10,175 | INFO     | mean y: 3104975.7398190047
[2025-11-27 09:56:56] 2025-11-27 14:56:10,175 | INFO     | intersect: -18119496529.97338
[2025-11-27 09:56:56] 2025-11-27 14:56:10,176 | INFO     | chi2: 2.9448701395525667
[2025-11-27 09:56:56] 2025-11-27 14:56:10,176 | INFO     | current chi2=2.9448701395525667 (change=17.82235911557427 %)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,176 | INFO     | right removable region: 883
[2025-11-27 09:56:56] 2025-11-27 14:56:10,177 | INFO     | sum of square deviations: 221563365274.76202
[2025-11-27 09:56:56] 2025-11-27 14:56:10,192 | INFO     | sum of deviations: 1051077078737.877
[2025-11-27 09:56:56] 2025-11-27 14:56:10,192 | INFO     | mean x: 1764228083.1577182
[2025-11-27 09:56:56] 2025-11-27 14:56:10,193 | INFO     | mean y: 3083175.880313199
[2025-11-27 09:56:56] 2025-11-27 14:56:10,193 | INFO     | intersect: -8366259371.21975
[2025-11-27 09:56:56] 2025-11-27 14:56:10,194 | INFO     | chi2: 8.633423846925488
[2025-11-27 09:56:56] 2025-11-27 14:56:10,194 | INFO     | current chi2=8.633423846925488 (change=23.913203641145138 %)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,194 | INFO     | left removable region: 10
[2025-11-27 09:56:56] 2025-11-27 14:56:10,195 | INFO     | sum of square deviations: 206315134994.8745
[2025-11-27 09:56:56] 2025-11-27 14:56:10,211 | INFO     | sum of deviations: 1825229698470.9148
[2025-11-27 09:56:56] 2025-11-27 14:56:10,211 | INFO     | mean x: 1764227747.6895761
[2025-11-27 09:56:56] 2025-11-27 14:56:10,212 | INFO     | mean y: 3121238.2542955326
[2025-11-27 09:56:56] 2025-11-27 14:56:10,212 | INFO     | intersect: -15604657027.889212
[2025-11-27 09:56:56] 2025-11-27 14:56:10,213 | INFO     | chi2: 0.08354677408680164
[2025-11-27 09:56:56] 2025-11-27 14:56:10,213 | INFO     | current memory leak: 8.85 B/s (using 873 data points, chi2=0.08)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,214 | INFO     | could have reported an average CPU frequency of 2904 MHz (33 samples)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,214 | INFO     | ..............................
[2025-11-27 09:56:56] 2025-11-27 14:56:10,214 | INFO     | . Timing measurements:
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . get job = 0 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . initial setup = 3 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . payload setup = 16 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . stage-in = 0 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . payload execution = 54806 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . stage-out = 6 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | . log creation = 1 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,215 | INFO     | ..............................
[2025-11-27 09:56:56] 2025-11-27 14:56:10,303 | INFO     | 
[2025-11-27 09:56:56] 2025-11-27 14:56:10,303 | INFO     | job summary report
[2025-11-27 09:56:56] 2025-11-27 14:56:10,303 | INFO     | --------------------------------------------------
[2025-11-27 09:56:56] 2025-11-27 14:56:10,303 | INFO     | PanDA job id: 6897881265
[2025-11-27 09:56:56] 2025-11-27 14:56:10,303 | INFO     | task id: 47556161
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | errors: (none)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | pilot state: finished 
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | transexitcode: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | exeerrorcode: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | exeerrordiag: 
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | exitcode: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | exitmsg: OK
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | cpuconsumptiontime: 248142 s
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | nevents: 1000
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | neventsw: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | pid: 2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | pgrp: 2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:10,304 | INFO     | corecount: 9
[2025-11-27 09:56:56] 2025-11-27 14:56:10,305 | INFO     | event service: False
[2025-11-27 09:56:56] 2025-11-27 14:56:10,305 | INFO     | sizes: {0: 2284264, 11: 2284264, 14: 2284554, 22: 2284582, 54826: 2335520, 54834: 2344514, 54835: 2344698, 54861: 2345008}
[2025-11-27 09:56:56] 2025-11-27 14:56:10,305 | INFO     | --------------------------------------------------
[2025-11-27 09:56:56] 2025-11-27 14:56:10,305 | INFO     | 
[2025-11-27 09:56:56] 2025-11-27 14:56:10,305 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 09:56:56] 2025-11-27 14:56:10,448 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,449 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,450 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:56:56] 2025-11-27 14:56:10,451 | INFO     | job 6897881265 has completed (purged errors)
[2025-11-27 09:56:56] 2025-11-27 14:56:10,451 | INFO     | overall cleanup function is called
[2025-11-27 09:56:56] 2025-11-27 14:56:11,491 | INFO     | --- collectZombieJob: --- 10, [2634374]
[2025-11-27 09:56:56] 2025-11-27 14:56:11,491 | INFO     | zombie collector waiting for pid 2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:11,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:56:56] 2025-11-27 14:56:11,492 | INFO     | collected zombie processes
[2025-11-27 09:56:56] 2025-11-27 14:56:11,492 | INFO     | will attempt to kill all subprocesses of pid=2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:12,051 | INFO     | process IDs to be killed: [2634374] (in reverse order)
[2025-11-27 09:56:56] 2025-11-27 14:56:12,210 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:56:56] 2025-11-27 14:56:12,210 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:56:56] 2025-11-27 14:56:12,227 | INFO     | did not find any defunct processes belonging to 2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:12,244 | INFO     | did not find any defunct processes belonging to 2634374
[2025-11-27 09:56:56] 2025-11-27 14:56:12,245 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:56:56] 2025-11-27 14:56:12,245 | INFO     | ready for new job
[2025-11-27 09:56:56] 2025-11-27 14:56:12,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:56:56] 2025-11-27 14:56:12,249 | INFO     | ***************************************
[2025-11-27 09:56:56] 2025-11-27 14:56:12,250 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:56:56] 2025-11-27 14:56:12,250 | INFO     | ***************************************
[2025-11-27 09:56:56] 2025-11-27 14:56:12,250 | INFO     | 
[2025-11-27 09:56:56] 2025-11-27 14:56:12,252 | INFO     | architecture information:
[2025-11-27 09:56:56] 2025-11-27 14:56:12,253 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:56:56] 2025-11-27 14:56:12,295 | INFO     | cat /etc/os-release:
[2025-11-27 09:56:56] NAME="CentOS Linux"
[2025-11-27 09:56:56] VERSION="7 (Core)"
[2025-11-27 09:56:56] ID="centos"
[2025-11-27 09:56:56] ID_LIKE="rhel fedora"
[2025-11-27 09:56:56] VERSION_ID="7"
[2025-11-27 09:56:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:56:56] ANSI_COLOR="0;31"
[2025-11-27 09:56:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:56:56] HOME_URL="https://www.centos.org/"
[2025-11-27 09:56:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:56:56] 
[2025-11-27 09:56:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:56:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:56:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:56:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:56:56] 
[2025-11-27 09:56:56] 2025-11-27 14:56:12,296 | INFO     | ***************************************
[2025-11-27 09:56:56] 2025-11-27 14:56:12,798 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 09:56:56] 2025-11-27 14:56:12,836 | INFO     | sufficient remaining disk space (68068311040 B)
[2025-11-27 09:56:56] 2025-11-27 14:56:12,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:56:56] 2025-11-27 14:56:12,836 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:56:56] 2025-11-27 14:56:12,836 | INFO     | update_server=False
[2025-11-27 09:56:56] 2025-11-27 14:56:12,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:56:56] 2025-11-27 14:56:12,907 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 09:56:56] 2025-11-27 14:56:12,907 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 09:56:56] 2025-11-27 14:56:12,908 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:56:56] 2025-11-27 14:56:12,908 | INFO     | will abort loop
[2025-11-27 09:56:56] 2025-11-27 14:56:12,956 [wrapper] supervise_pilot (15 min periods counter: 62)
[2025-11-27 09:56:56] 2025-11-27 14:56:13,064 | INFO     | all data control threads have been joined
[2025-11-27 09:56:56] 2025-11-27 14:56:13,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:56:56] 2025-11-27 14:56:13,615 | INFO     | all payload control threads have been joined
[2025-11-27 09:56:56] 2025-11-27 14:56:13,842 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:13,875 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:13,905 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:56:56] 2025-11-27 14:56:13,913 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:13,947 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:13,953 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,070 | INFO     | [data] control thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,142 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,238 | INFO     | all job control threads have been joined
[2025-11-27 09:56:56] 2025-11-27 14:56:14,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,410 | INFO     | [job] validate thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,477 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,517 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:14,621 | INFO     | [payload] control thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:15,244 | INFO     | [job] control thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:15,317 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:56:56] 2025-11-27 14:56:15,912 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:16,321 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:17,213 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:56:56] 2025-11-27 14:56:42,718 | INFO     | PID=2627259 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:56:56] 2025-11-27 14:56:42,719 | INFO     | .. there are 33 such processes running
[2025-11-27 09:56:56] 2025-11-27 14:56:42,719 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:56:56] 2025-11-27 14:56:42,719 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:56:56] 2025-11-27 14:56:42,719 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:56:56] 2025-11-27 14:56:47,971 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:56:56] 2025-11-27 14:56:50,055 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184682051392)>', '<ExcThread(monitor, started 140184335132416)>']
[2025-11-27 09:56:56] 2025-11-27 14:56:50,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:56:56] 2025-11-27 14:56:50,765 | INFO     | [monitor] control thread has ended
[2025-11-27 09:56:56] 2025-11-27 14:56:55,083 | INFO     | all workflow threads have been joined
[2025-11-27 09:56:56] 2025-11-27 14:56:55,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:56:56] 2025-11-27 14:56:55,084 | INFO     | traces error code: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:55,084 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:56:56] 2025-11-27 14:56:55,260 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:56:56] 2025-11-27 14:56:55,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:56:56] 2025-11-27 14:56:55,290 [wrapper] pilotpid: 2627259
[2025-11-27 09:56:56] 2025-11-27 14:56:55,305 [wrapper] Pilot exit status: 0
[2025-11-27 09:56:56] 2025-11-27 14:56:55,446 [wrapper] pandaids: 6897881265
[2025-11-27 09:56:56] 2025-11-27 14:56:55,596 [wrapper] cleanup supervisor_pilot 1162233 2627260
[2025-11-27 09:56:56] 2025-11-27 14:56:55,607 [wrapper] Test setup, not cleaning
[2025-11-27 09:56:56] 2025-11-27 14:56:55,626 [wrapper] apfmon messages muted
[2025-11-27 09:56:56] 2025-11-27 14:56:55,642 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:56:56] 2025-11-27 14:56:55,646 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:56:56]  *** Error codes and diagnostics ***
[2025-11-27 09:56:56]     "exeErrorCode": 0,
[2025-11-27 09:56:56]     "exeErrorDiag": "",
[2025-11-27 09:56:56]     "pilotErrorCode": 0,
[2025-11-27 09:56:56]     "pilotErrorDiag": "",
[2025-11-27 09:56:56]  *** Listing of results directory ***
[2025-11-27 09:56:56] total 1329028
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:07 queuedata.json
[2025-11-27 09:56:56] -rwx------. 1 boincer umatlas     36292 Nov 25 21:10 runpilot2-wrapper.sh
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:56:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:40 run_atlas
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:40 job.xml
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas 407652822 Nov 26 18:40 EVNT.47483658._002365.pool.root.1
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 18:40 input.tar.gz
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:40 start_atlas.sh
[2025-11-27 09:56:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:40 shared
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:40 boinc_lockfile
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:40 pandaJob.out
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas        57 Nov 26 18:40 setup.sh.local
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas    991538 Nov 26 18:41 agis_schedconf.cvmfs.json
[2025-11-27 09:56:56] drwx------. 5 boincer umatlas      4096 Nov 26 18:41 pilot3
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:38 boinc_task_state.xml
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas 930849962 Nov 27 09:53 HITS.47556161._003480.pool.root.1
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 09:54 init_data.xml
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas      1075 Nov 27 09:55 memory_monitor_summary.json
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas   2183010 Nov 27 09:55 log.47556161._003480.job.log.tgz.1
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas        95 Nov 27 09:56 pilot_heartbeat.json
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas      8627 Nov 27 09:56 heartbeat.json
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas      5010 Nov 27 09:56 pilotlog.txt
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:56 boinc_mmap_file
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:56 wrapper_checkpoint.txt
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas   7068054 Nov 27 09:56 log.47556161._003480.job.log.1
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas       353 Nov 27 09:56 output.list
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:56 runtime_log
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas   9267200 Nov 27 09:56 result.tar.gz
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 09:56 runtime_log.err
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas       663 Nov 27 09:56 f5nKDm79Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQiMKDmvWtbnm.diag
[2025-11-27 09:56:56] -rw-r--r--. 1 boincer umatlas     21303 Nov 27 09:56 stderr.txt
[2025-11-27 09:56:56] HITS file was successfully produced:
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas 930849962 Nov 27 09:53 shared/HITS.pool.root.1
[2025-11-27 09:56:56]  *** Contents of shared directory: ***
[2025-11-27 09:56:56] total 1316792
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas 407652822 Nov 26 18:40 ATLAS.root_0
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas    590107 Nov 26 18:40 input.tar.gz
[2025-11-27 09:56:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:40 start_atlas.sh
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas 930849962 Nov 27 09:53 HITS.pool.root.1
[2025-11-27 09:56:56] -rw-------. 1 boincer umatlas   9267200 Nov 27 09:56 result.tar.gz
09:56:58 (2623564): run_atlas exited; CPU time 249498.089546
09:56:58 (2623564): called boinc_finish(0)

</stderr_txt>
]]>

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