Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:59:03 (2067957): wrapper (7.7.26015): starting
18:59:03 (2067957): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:59:03] Arguments: --nthreads 8
[2025-11-26 18:59:03] Threads: 8
[2025-11-26 18:59:03] Checking for CVMFS
[2025-11-26 18:59:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:59:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:59:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:59:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:59:05] 2.13.3.0 11334 30741 354192 153340 3 799 25239149 32935936 30973 16776704 0 139854689 99.516 182053249 40688 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:59:05] CVMFS is ok
[2025-11-26 18:59:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:59:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:59:05] Further information can be found at the LHC@home message board.
[2025-11-26 18:59:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:59:05] Checking for apptainer binary...
[2025-11-26 18:59:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:59:05] Running /usr/bin/apptainer --version
[2025-11-26 18:59:05] apptainer version 1.4.4-1.el9
[2025-11-26 18:59:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:59:06] c6-4-5-2.aglt2.org
[2025-11-26 18:59:06] apptainer works
[2025-11-26 18:59:06] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:59:06] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:59:06] Starting ATLAS job with PandaID=6897881108
[2025-11-26 18:59:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:41:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:41:16] 2025-11-28 02:40:40,919 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:41:16] 2025-11-28 02:40:40,959 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:41:16] 2025-11-28 02:40:40,965 | INFO     | sum of square deviations: 1204563669215.6658
[2025-11-27 21:41:16] 2025-11-28 02:40:41,016 | INFO     | sum of deviations: 5807889499421.694
[2025-11-27 21:41:16] 2025-11-28 02:40:41,016 | INFO     | mean x: 1764249643.1660306
[2025-11-27 21:41:16] 2025-11-28 02:40:41,017 | INFO     | mean y: 2905301.6984732826
[2025-11-27 21:41:16] 2025-11-28 02:40:41,017 | INFO     | intersect: -8503549972.329809
[2025-11-27 21:41:16] 2025-11-28 02:40:41,018 | INFO     | chi2: 10.920053033409085
[2025-11-27 21:41:16] 2025-11-28 02:40:41,020 | INFO     | sum of square deviations: 1193106415583.4385
[2025-11-27 21:41:16] 2025-11-28 02:40:41,061 | INFO     | sum of deviations: 6327975470979.4375
[2025-11-27 21:41:16] 2025-11-28 02:40:41,061 | INFO     | mean x: 1764249490.6681557
[2025-11-27 21:41:16] 2025-11-28 02:40:41,061 | INFO     | mean y: 2912225.2431397573
[2025-11-27 21:41:16] 2025-11-28 02:40:41,061 | INFO     | intersect: -9354281195.074451
[2025-11-27 21:41:16] 2025-11-28 02:40:41,063 | INFO     | chi2: 7.914253027241145
[2025-11-27 21:41:16] 2025-11-28 02:40:41,063 | INFO     | current chi2=7.914253027241145 (change=27.525507403415713 %)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,065 | INFO     | sum of square deviations: 1181722047038.7014
[2025-11-27 21:41:16] 2025-11-28 02:40:41,141 | INFO     | sum of deviations: 6725328287861.84
[2025-11-27 21:41:16] 2025-11-28 02:40:41,141 | INFO     | mean x: 1764249338.1702945
[2025-11-27 21:41:16] 2025-11-28 02:40:41,141 | INFO     | mean y: 2917544.5870678616
[2025-11-27 21:41:16] 2025-11-28 02:40:41,141 | INFO     | intersect: -10037646571.629025
[2025-11-27 21:41:16] 2025-11-28 02:40:41,144 | INFO     | chi2: 5.8891919887667195
[2025-11-27 21:41:16] 2025-11-28 02:40:41,144 | INFO     | current chi2=5.8891919887667195 (change=25.58751952337248 %)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,150 | INFO     | sum of square deviations: 1170410331018.9473
[2025-11-27 21:41:16] 2025-11-28 02:40:41,229 | INFO     | sum of deviations: 6868557976350.305
[2025-11-27 21:41:16] 2025-11-28 02:40:41,230 | INFO     | mean x: 1764249185.672447
[2025-11-27 21:41:16] 2025-11-28 02:40:41,230 | INFO     | mean y: 2919474.4104046244
[2025-11-27 21:41:16] 2025-11-28 02:40:41,230 | INFO     | intersect: -10350584331.362003
[2025-11-27 21:41:16] 2025-11-28 02:40:41,236 | INFO     | chi2: 5.499824133261359
[2025-11-27 21:41:16] 2025-11-28 02:40:41,236 | INFO     | current chi2=5.499824133261359 (change=6.611566684327097 %)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,236 | INFO     | right removable region: 1556
[2025-11-27 21:41:16] 2025-11-28 02:40:41,242 | INFO     | sum of square deviations: 1193105776913.4385
[2025-11-27 21:41:16] 2025-11-28 02:40:41,322 | INFO     | sum of deviations: 5201860000470.205
[2025-11-27 21:41:16] 2025-11-28 02:40:41,329 | INFO     | mean x: 1764249795.6681557
[2025-11-27 21:41:16] 2025-11-28 02:40:41,329 | INFO     | mean y: 2913366.6253988515
[2025-11-27 21:41:16] 2025-11-28 02:40:41,329 | INFO     | intersect: -7689095691.168094
[2025-11-27 21:41:16] 2025-11-28 02:40:41,331 | INFO     | chi2: 7.168917049125192
[2025-11-27 21:41:16] 2025-11-28 02:40:41,331 | INFO     | current chi2=7.168917049125192 (change=34.35089530066907 %)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,333 | INFO     | sum of square deviations: 1181720865042.0408
[2025-11-27 21:41:16] 2025-11-28 02:40:41,420 | INFO     | sum of deviations: 4824116848808.834
[2025-11-27 21:41:16] 2025-11-28 02:40:41,420 | INFO     | mean x: 1764249948.1696544
[2025-11-27 21:41:16] 2025-11-28 02:40:41,420 | INFO     | mean y: 2918423.608194622
[2025-11-27 21:41:16] 2025-11-28 02:40:41,420 | INFO     | intersect: -7199245938.762235
[2025-11-27 21:41:16] 2025-11-28 02:40:41,424 | INFO     | chi2: 5.708972086808568
[2025-11-27 21:41:16] 2025-11-28 02:40:41,424 | INFO     | current chi2=5.708972086808568 (change=20.364930327862822 %)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,424 | INFO     | left removable region: 20
[2025-11-27 21:41:16] 2025-11-28 02:40:41,426 | INFO     | sum of square deviations: 1123687725415.24
[2025-11-27 21:41:16] 2025-11-28 02:40:41,510 | INFO     | sum of deviations: 5640670666944.293
[2025-11-27 21:41:16] 2025-11-28 02:40:41,511 | INFO     | mean x: 1764249765.1744792
[2025-11-27 21:41:16] 2025-11-28 02:40:41,511 | INFO     | mean y: 2936205.30859375
[2025-11-27 21:41:16] 2025-11-28 02:40:41,511 | INFO     | intersect: -8853218110.967854
[2025-11-27 21:41:16] 2025-11-28 02:40:41,513 | INFO     | chi2: 0.11267034211120204
[2025-11-27 21:41:16] 2025-11-28 02:40:41,513 | INFO     | current memory leak: 5.02 B/s (using 1536 data points, chi2=0.11)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,517 | INFO     | could have reported an average CPU frequency of 3171 MHz (56 samples)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | ..............................
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . Timing measurements:
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . get job = 0 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . initial setup = 4 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . payload setup = 33 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . stage-in = 0 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . payload execution = 95908 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . stage-out = 6 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | . log creation = 2 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,518 | INFO     | ..............................
[2025-11-27 21:41:16] 2025-11-28 02:40:41,622 | INFO     | 
[2025-11-27 21:41:16] 2025-11-28 02:40:41,622 | INFO     | job summary report
[2025-11-27 21:41:16] 2025-11-28 02:40:41,622 | INFO     | --------------------------------------------------
[2025-11-27 21:41:16] 2025-11-28 02:40:41,622 | INFO     | PanDA job id: 6897881108
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | task id: 47556161
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | errors: (none)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | pilot state: finished 
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | transexitcode: 0
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | exeerrorcode: 0
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | exeerrordiag: 
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | exitcode: 0
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | exitmsg: OK
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | cpuconsumptiontime: 230571 s
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | nevents: 1000
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | neventsw: 0
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | pid: 2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | pgrp: 2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | corecount: 8
[2025-11-27 21:41:16] 2025-11-28 02:40:41,623 | INFO     | event service: False
[2025-11-27 21:41:16] 2025-11-28 02:40:41,624 | INFO     | sizes: {0: 2284037, 1: 2284121, 2: 2284320, 13: 2284320, 24: 2284376, 28: 2284666, 34: 2284822, 95947: 2355223, 95954: 2364217, 95956: 2364273, 95975: 2364519}
[2025-11-27 21:41:16] 2025-11-28 02:40:41,624 | INFO     | --------------------------------------------------
[2025-11-27 21:41:16] 2025-11-28 02:40:41,624 | INFO     | 
[2025-11-27 21:41:16] 2025-11-28 02:40:41,624 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:41:16] 2025-11-28 02:40:41,690 | INFO     | job 6897881108 has completed (purged errors)
[2025-11-27 21:41:16] 2025-11-28 02:40:41,691 | INFO     | overall cleanup function is called
[2025-11-27 21:41:16] 2025-11-28 02:40:42,718 | INFO     | --- collectZombieJob: --- 10, [2092646]
[2025-11-27 21:41:16] 2025-11-28 02:40:42,718 | INFO     | zombie collector waiting for pid 2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:42,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:41:16] 2025-11-28 02:40:42,718 | INFO     | collected zombie processes
[2025-11-27 21:41:16] 2025-11-28 02:40:42,718 | INFO     | will attempt to kill all subprocesses of pid=2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:43,210 | INFO     | process IDs to be killed: [2092646] (in reverse order)
[2025-11-27 21:41:16] 2025-11-28 02:40:43,336 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:41:16] 2025-11-28 02:40:43,336 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:41:16] 2025-11-28 02:40:43,352 | INFO     | did not find any defunct processes belonging to 2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:43,368 | INFO     | did not find any defunct processes belonging to 2092646
[2025-11-27 21:41:16] 2025-11-28 02:40:43,369 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:41:16] 2025-11-28 02:40:43,369 | INFO     | ready for new job
[2025-11-27 21:41:16] 2025-11-28 02:40:43,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:41:16] 2025-11-28 02:40:43,375 | INFO     | ***************************************
[2025-11-27 21:41:16] 2025-11-28 02:40:43,375 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:41:16] 2025-11-28 02:40:43,375 | INFO     | ***************************************
[2025-11-27 21:41:16] 2025-11-28 02:40:43,375 | INFO     | 
[2025-11-27 21:41:16] 2025-11-28 02:40:43,378 | INFO     | architecture information:
[2025-11-27 21:41:16] 2025-11-28 02:40:43,378 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:41:16] 2025-11-28 02:40:43,397 | INFO     | cat /etc/os-release:
[2025-11-27 21:41:16] NAME="CentOS Linux"
[2025-11-27 21:41:16] VERSION="7 (Core)"
[2025-11-27 21:41:16] ID="centos"
[2025-11-27 21:41:16] ID_LIKE="rhel fedora"
[2025-11-27 21:41:16] VERSION_ID="7"
[2025-11-27 21:41:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:41:16] ANSI_COLOR="0;31"
[2025-11-27 21:41:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:41:16] HOME_URL="https://www.centos.org/"
[2025-11-27 21:41:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:41:16] 
[2025-11-27 21:41:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:41:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:41:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:41:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:41:16] 
[2025-11-27 21:41:16] 2025-11-28 02:40:43,397 | INFO     | ***************************************
[2025-11-27 21:41:16] 2025-11-28 02:40:43,901 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 21:41:16] 2025-11-28 02:40:43,953 | INFO     | sufficient remaining disk space (71378665472 B)
[2025-11-27 21:41:16] 2025-11-28 02:40:43,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:41:16] 2025-11-28 02:40:43,953 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:41:16] 2025-11-28 02:40:43,953 | INFO     | update_server=False
[2025-11-27 21:41:16] 2025-11-28 02:40:43,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:41:16] 2025-11-28 02:40:43,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:41:16] 2025-11-28 02:40:43,954 | INFO     | aborting loop
[2025-11-27 21:41:16] 2025-11-28 02:40:43,954 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:41:16] 2025-11-28 02:40:44,234 | INFO     | all job control threads have been joined
[2025-11-27 21:41:16] 2025-11-28 02:40:44,255 | INFO     | all payload control threads have been joined
[2025-11-27 21:41:16] 2025-11-28 02:40:44,754 | INFO     | all data control threads have been joined
[2025-11-27 21:41:16] 2025-11-28 02:40:44,962 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:44,962 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,240 | INFO     | [job] control thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,261 | INFO     | [payload] control thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,427 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,659 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,665 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,760 | INFO     | [data] control thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,804 | INFO     | [job] validate thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:45,966 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:46,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:41:16] 2025-11-28 02:40:46,224 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:46,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:46,426 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:46,464 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:46,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:41:16] 2025-11-28 02:40:47,668 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:50,052 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:41:16] 2025-11-28 02:40:55,821 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:41:16] 2025-11-28 02:40:56,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521707046720)>', '<ExcThread(monitor, started 140520986765056)>']
[2025-11-27 21:41:16] 2025-11-28 02:41:01,596 | INFO     | all workflow threads have been joined
[2025-11-27 21:41:16] 2025-11-28 02:41:01,596 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:41:16] 2025-11-28 02:41:01,596 | INFO     | traces error code: 0
[2025-11-27 21:41:16] 2025-11-28 02:41:01,596 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:41:16] 2025-11-28 02:41:14,959 | INFO     | PID=2076606 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:41:16] 2025-11-28 02:41:14,959 | INFO     | .. there are 53 such processes running
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 21:41:16] 2025-11-28 02:41:14,960 | INFO     | [monitor] control thread has ended
[2025-11-27 21:41:16] 2025-11-28 02:41:15,315 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:41:16] 2025-11-28 02:41:15,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:41:16] 2025-11-28 02:41:15,386 [wrapper] pilotpid: 2076606
[2025-11-27 21:41:16] 2025-11-28 02:41:15,409 [wrapper] Pilot exit status: 0
[2025-11-27 21:41:16] 2025-11-28 02:41:15,479 [wrapper] pandaids: 6897881108
[2025-11-27 21:41:16] 2025-11-28 02:41:15,691 [wrapper] cleanup supervisor_pilot 1229846 2076607
[2025-11-27 21:41:16] 2025-11-28 02:41:15,695 [wrapper] Test setup, not cleaning
[2025-11-27 21:41:16] 2025-11-28 02:41:15,697 [wrapper] apfmon messages muted
[2025-11-27 21:41:16] 2025-11-28 02:41:15,699 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:41:16] 2025-11-28 02:41:15,701 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:41:16]  *** Error codes and diagnostics ***
[2025-11-27 21:41:16]     "exeErrorCode": 0,
[2025-11-27 21:41:16]     "exeErrorDiag": "",
[2025-11-27 21:41:16]     "pilotErrorCode": 0,
[2025-11-27 21:41:16]     "pilotErrorDiag": "",
[2025-11-27 21:41:16]  *** Listing of results directory ***
[2025-11-27 21:41:16] total 1336564
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:00 queuedata.json
[2025-11-27 21:41:16] -rwx------. 1 boincer umatlas     36292 Nov 25 21:03 runpilot2-wrapper.sh
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:41:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:59 run_atlas
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:59 job.xml
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas 410781549 Nov 26 18:59 EVNT.47483658._002361.pool.root.1
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:59 start_atlas.sh
[2025-11-27 21:41:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:59 shared
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 18:59 input.tar.gz
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:59 boinc_lockfile
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:59 pandaJob.out
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas        57 Nov 26 18:59 setup.sh.local
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas    991538 Nov 26 19:00 agis_schedconf.cvmfs.json
[2025-11-27 21:41:16] drwx------. 5 boincer umatlas      4096 Nov 26 19:00 pilot3
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:23 boinc_task_state.xml
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas      6877 Nov 27 21:36 init_data.xml
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas 923434770 Nov 27 21:39 HITS.47556161._003432.pool.root.1
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas      1058 Nov 27 21:40 memory_monitor_summary.json
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas   2596137 Nov 27 21:40 log.47556161._003432.job.log.tgz.1
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas      8613 Nov 27 21:40 heartbeat.json
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas       893 Nov 27 21:41 pilotlog.txt
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas        95 Nov 27 21:41 pilot_heartbeat.json
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas  12657617 Nov 27 21:41 log.47556161._003432.job.log.1
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas       353 Nov 27 21:41 output.list
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:41 boinc_mmap_file
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:41 wrapper_checkpoint.txt
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:41 runtime_log
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas  15278080 Nov 27 21:41 result.tar.gz
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas       660 Nov 27 21:41 WypKDm53Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIhMKDmWwjfOm.diag
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 21:41 runtime_log.err
[2025-11-27 21:41:16] -rw-r--r--. 1 boincer umatlas     21157 Nov 27 21:41 stderr.txt
[2025-11-27 21:41:16] HITS file was successfully produced:
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas 923434770 Nov 27 21:39 shared/HITS.pool.root.1
[2025-11-27 21:41:16]  *** Contents of shared directory: ***
[2025-11-27 21:41:16] total 1318468
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas 410781549 Nov 26 18:59 ATLAS.root_0
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:59 start_atlas.sh
[2025-11-27 21:41:16] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 18:59 input.tar.gz
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas 923434770 Nov 27 21:39 HITS.pool.root.1
[2025-11-27 21:41:16] -rw-------. 1 boincer umatlas  15278080 Nov 27 21:41 result.tar.gz
21:41:18 (2067957): run_atlas exited; CPU time 233082.897107
21:41:18 (2067957): called boinc_finish(0)

</stderr_txt>
]]>

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