Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:44 (15145): wrapper (7.7.26015): starting
18:07:44 (15145): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 18:07:44] Arguments: --nthreads 12
[2025-11-26 18:07:44] Threads: 12
[2025-11-26 18:07:44] Checking for CVMFS
[2025-11-26 18:07:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:07:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:07:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:07:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:07:44] 2.11.2.0 2979 288335 93228 153338 1 71 17825272 20275200 1 130560 1 129002906 99.975 16068525 13901 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:07:44] CVMFS is ok
[2025-11-26 18:07:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:07:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:07:44] Further information can be found at the LHC@home message board.
[2025-11-26 18:07:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:07:44] Checking for apptainer binary...
[2025-11-26 18:07:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:07:44] Running /usr/bin/apptainer --version
[2025-11-26 18:07:44] apptainer version 1.3.2-1.el7
[2025-11-26 18:07:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:07:45] c-205-21.aglt2.org
[2025-11-26 18:07:45] apptainer works
[2025-11-26 18:07:45] Set ATHENA_PROC_NUMBER=12
[2025-11-26 18:07:45] Set ATHENA_CORE_NUMBER=12
[2025-11-26 18:07:46] Starting ATLAS job with PandaID=6897998750
[2025-11-26 18:07:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:20:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:20:48] 2025-11-27 06:19:51,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,112 | INFO     | PID=18831 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 01:20:48] 2025-11-27 06:19:51,530 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 01:20:48] 2025-11-27 06:19:51,534 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-27 01:20:48] 2025-11-27 06:19:51,536 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897998750/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,537 | INFO     | extracted standard info from prmon json
[2025-11-27 01:20:48] 2025-11-27 06:19:51,537 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:20:48] 2025-11-27 06:19:51,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:20:48] 2025-11-27 06:19:51,545 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:20:48] 2025-11-27 06:19:51,545 | INFO     | sum of square deviations: 23803686379.661373
[2025-11-27 01:20:48] 2025-11-27 06:19:51,549 | INFO     | sum of deviations: 411582879700.697
[2025-11-27 01:20:48] 2025-11-27 06:19:51,549 | INFO     | mean x: 1764211441.1482353
[2025-11-27 01:20:48] 2025-11-27 06:19:51,549 | INFO     | mean y: 3413231.1952941176
[2025-11-27 01:20:48] 2025-11-27 06:19:51,549 | INFO     | intersect: -30501073081.022587
[2025-11-27 01:20:48] 2025-11-27 06:19:51,550 | INFO     | chi2: 6.222227400460166
[2025-11-27 01:20:48] 2025-11-27 06:19:51,550 | INFO     | sum of square deviations: 22973420259.549988
[2025-11-27 01:20:48] 2025-11-27 06:19:51,554 | INFO     | sum of deviations: 576074021923.2499
[2025-11-27 01:20:48] 2025-11-27 06:19:51,555 | INFO     | mean x: 1764211288.65
[2025-11-27 01:20:48] 2025-11-27 06:19:51,555 | INFO     | mean y: 3443414.0833333335
[2025-11-27 01:20:48] 2025-11-27 06:19:51,555 | INFO     | intersect: -44235345633.99169
[2025-11-27 01:20:48] 2025-11-27 06:19:51,555 | INFO     | chi2: 3.1481076303657347
[2025-11-27 01:20:48] 2025-11-27 06:19:51,556 | INFO     | current chi2=3.1481076303657347 (change=49.40545518903864 %)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,556 | INFO     | sum of square deviations: 22162689389.436012
[2025-11-27 01:20:48] 2025-11-27 06:19:51,560 | INFO     | sum of deviations: 606600569125.7592
[2025-11-27 01:20:48] 2025-11-27 06:19:51,560 | INFO     | mean x: 1764211136.1518073
[2025-11-27 01:20:48] 2025-11-27 06:19:51,560 | INFO     | mean y: 3449103.987951807
[2025-11-27 01:20:48] 2025-11-27 06:19:51,560 | INFO     | intersect: -48283627452.605064
[2025-11-27 01:20:48] 2025-11-27 06:19:51,561 | INFO     | chi2: 2.772203285195437
[2025-11-27 01:20:48] 2025-11-27 06:19:51,561 | INFO     | current chi2=2.772203285195437 (change=11.940644644561496 %)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,561 | INFO     | right removable region: 414
[2025-11-27 01:20:48] 2025-11-27 06:19:51,562 | INFO     | sum of square deviations: 22973381829.549973
[2025-11-27 01:20:48] 2025-11-27 06:19:51,565 | INFO     | sum of deviations: 263846367684.4495
[2025-11-27 01:20:48] 2025-11-27 06:19:51,566 | INFO     | mean x: 1764211593.65
[2025-11-27 01:20:48] 2025-11-27 06:19:51,566 | INFO     | mean y: 3440292.492857143
[2025-11-27 01:20:48] 2025-11-27 06:19:51,566 | INFO     | intersect: -20258305421.08826
[2025-11-27 01:20:48] 2025-11-27 06:19:51,566 | INFO     | chi2: 3.705156204112196
[2025-11-27 01:20:48] 2025-11-27 06:19:51,566 | INFO     | current chi2=3.705156204112196 (change=40.45289627572626 %)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,567 | INFO     | sum of square deviations: 22162612529.436012
[2025-11-27 01:20:48] 2025-11-27 06:19:51,571 | INFO     | sum of deviations: 221780163351.25037
[2025-11-27 01:20:48] 2025-11-27 06:19:51,571 | INFO     | mean x: 1764211746.1518073
[2025-11-27 01:20:48] 2025-11-27 06:19:51,571 | INFO     | mean y: 3448196.9325301205
[2025-11-27 01:20:48] 2025-11-27 06:19:51,571 | INFO     | intersect: -17650931165.070393
[2025-11-27 01:20:48] 2025-11-27 06:19:51,571 | INFO     | chi2: 3.599287084541981
[2025-11-27 01:20:48] 2025-11-27 06:19:51,572 | INFO     | current chi2=3.599287084541981 (change=2.857345648550947 %)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,572 | INFO     | left removable region: 20
[2025-11-27 01:20:48] 2025-11-27 06:19:51,572 | INFO     | sum of square deviations: 18965542474.426388
[2025-11-27 01:20:48] 2025-11-27 06:19:51,575 | INFO     | sum of deviations: 357643887755.58875
[2025-11-27 01:20:48] 2025-11-27 06:19:51,576 | INFO     | mean x: 1764211715.6598985
[2025-11-27 01:20:48] 2025-11-27 06:19:51,576 | INFO     | mean y: 3497047.220812183
[2025-11-27 01:20:48] 2025-11-27 06:19:51,576 | INFO     | intersect: -33265234267.128094
[2025-11-27 01:20:48] 2025-11-27 06:19:51,576 | INFO     | chi2: 0.056031812781043674
[2025-11-27 01:20:48] 2025-11-27 06:19:51,576 | INFO     | current memory leak: 18.86 B/s (using 394 data points, chi2=0.06)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | could have reported an average CPU frequency of 2386 MHz (18 samples)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | ..............................
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . Timing measurements:
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . get job = 0 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . initial setup = 2 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . payload setup = 7 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . stage-in = 0 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,577 | INFO     | . payload execution = 25873 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,578 | INFO     | . stage-out = 3 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,578 | INFO     | . log creation = 0 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,578 | INFO     | ..............................
[2025-11-27 01:20:48] 2025-11-27 06:19:51,657 | INFO     | 
[2025-11-27 01:20:48] 2025-11-27 06:19:51,658 | INFO     | job summary report
[2025-11-27 01:20:48] 2025-11-27 06:19:51,658 | INFO     | --------------------------------------------------
[2025-11-27 01:20:48] 2025-11-27 06:19:51,658 | INFO     | PanDA job id: 6897998750
[2025-11-27 01:20:48] 2025-11-27 06:19:51,658 | INFO     | task id: 47556173
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | errors: (none)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | pilot state: finished 
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | transexitcode: 0
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | exeerrorcode: 0
[2025-11-27 01:20:48] 2025-11-27 06:19:51,660 | INFO     | exeerrordiag: 
[2025-11-27 01:20:48] 2025-11-27 06:19:51,661 | INFO     | exitcode: 0
[2025-11-27 01:20:48] 2025-11-27 06:19:51,661 | INFO     | exitmsg: OK
[2025-11-27 01:20:48] 2025-11-27 06:19:51,661 | INFO     | cpuconsumptiontime: 297188 s
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | nevents: 1000
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | neventsw: 0
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | pid: 25324
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | pgrp: 25324
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | corecount: 12
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | event service: False
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | sizes: {0: 2284264, 5: 2284526, 11: 2284582, 25885: 2321875, 25888: 2330869, 25890: 2330925, 25896: 2331299}
[2025-11-27 01:20:48] 2025-11-27 06:19:51,662 | INFO     | --------------------------------------------------
[2025-11-27 01:20:48] 2025-11-27 06:19:51,663 | INFO     | 
[2025-11-27 01:20:48] 2025-11-27 06:19:51,663 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 01:20:48] 2025-11-27 06:19:51,685 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,687 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,688 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,689 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:20:48] 2025-11-27 06:19:51,689 | INFO     | job 6897998750 has completed (purged errors)
[2025-11-27 01:20:48] 2025-11-27 06:19:51,689 | INFO     | overall cleanup function is called
[2025-11-27 01:20:48] 2025-11-27 06:19:52,706 | INFO     | --- collectZombieJob: --- 10, [25324]
[2025-11-27 01:20:48] 2025-11-27 06:19:52,706 | INFO     | zombie collector waiting for pid 25324
[2025-11-27 01:20:48] 2025-11-27 06:19:52,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:20:48] 2025-11-27 06:19:52,707 | INFO     | collected zombie processes
[2025-11-27 01:20:48] 2025-11-27 06:19:52,707 | INFO     | will attempt to kill all subprocesses of pid=25324
[2025-11-27 01:20:48] 2025-11-27 06:19:52,797 | INFO     | process IDs to be killed: [25324] (in reverse order)
[2025-11-27 01:20:48] 2025-11-27 06:19:52,847 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:20:48] 2025-11-27 06:19:52,847 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:20:48] 2025-11-27 06:19:52,850 | INFO     | did not find any defunct processes belonging to 25324
[2025-11-27 01:20:48] 2025-11-27 06:19:52,853 | INFO     | did not find any defunct processes belonging to 25324
[2025-11-27 01:20:48] 2025-11-27 06:19:52,855 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:20:48] 2025-11-27 06:19:52,855 | INFO     | ready for new job
[2025-11-27 01:20:48] 2025-11-27 06:19:52,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:20:48] 2025-11-27 06:19:52,858 | INFO     | ***************************************
[2025-11-27 01:20:48] 2025-11-27 06:19:52,858 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:20:48] 2025-11-27 06:19:52,858 | INFO     | ***************************************
[2025-11-27 01:20:48] 2025-11-27 06:19:52,858 | INFO     | 
[2025-11-27 01:20:48] 2025-11-27 06:19:52,859 | INFO     | architecture information:
[2025-11-27 01:20:48] 2025-11-27 06:19:52,859 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:20:48] 2025-11-27 06:19:52,875 | INFO     | cat /etc/os-release:
[2025-11-27 01:20:48] NAME="CentOS Linux"
[2025-11-27 01:20:48] VERSION="7 (Core)"
[2025-11-27 01:20:48] ID="centos"
[2025-11-27 01:20:48] ID_LIKE="rhel fedora"
[2025-11-27 01:20:48] VERSION_ID="7"
[2025-11-27 01:20:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:20:48] ANSI_COLOR="0;31"
[2025-11-27 01:20:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:20:48] HOME_URL="https://www.centos.org/"
[2025-11-27 01:20:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:20:48] 
[2025-11-27 01:20:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:20:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:20:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:20:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:20:48] 
[2025-11-27 01:20:48] 2025-11-27 06:19:52,875 | INFO     | ***************************************
[2025-11-27 01:20:48] 2025-11-27 06:19:53,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 01:20:48] 2025-11-27 06:19:53,395 | INFO     | sufficient remaining disk space (28254928896 B)
[2025-11-27 01:20:48] 2025-11-27 06:19:53,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:20:48] 2025-11-27 06:19:53,395 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:20:48] 2025-11-27 06:19:53,396 | INFO     | update_server=False
[2025-11-27 01:20:48] 2025-11-27 06:19:53,396 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:20:48] 2025-11-27 06:19:53,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:20:48] 2025-11-27 06:19:53,543 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 01:20:48] 2025-11-27 06:19:53,544 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 01:20:48] 2025-11-27 06:19:53,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:20:48] 2025-11-27 06:19:53,553 | INFO     | will abort loop
[2025-11-27 01:20:48] 2025-11-27 06:19:53,562 | INFO     | all job control threads have been joined
[2025-11-27 01:20:48] 2025-11-27 06:19:53,972 | INFO     | all payload control threads have been joined
[2025-11-27 01:20:48] 2025-11-27 06:19:54,003 | INFO     | all data control threads have been joined
[2025-11-27 01:20:48] 2025-11-27 06:19:54,392 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:20:48] 2025-11-27 06:19:54,401 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,402 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,554 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,568 | INFO     | [job] control thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,859 | INFO     | [job] validate thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,971 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:54,977 | INFO     | [payload] control thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,008 | INFO     | [data] control thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,189 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,219 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,227 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,626 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,686 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:55,974 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:56,394 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:19:56,523 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:20:48] 2025-11-27 06:20:00,529 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:20:48] 2025-11-27 06:20:23,301 | INFO     | PID=18831 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:20:48] 2025-11-27 06:20:23,301 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:20:48] 2025-11-27 06:20:23,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:20:48] 2025-11-27 06:20:23,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:20:48] 2025-11-27 06:20:42,390 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:20:48] 2025-11-27 06:20:42,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543637022528)>', '<ExcThread(monitor, started 140542377707264)>']
[2025-11-27 01:20:48] 2025-11-27 06:20:43,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:20:48] 2025-11-27 06:20:43,394 | INFO     | [monitor] control thread has ended
[2025-11-27 01:20:48] 2025-11-27 06:20:47,687 | INFO     | all workflow threads have been joined
[2025-11-27 01:20:48] 2025-11-27 06:20:47,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:20:48] 2025-11-27 06:20:47,688 | INFO     | traces error code: 0
[2025-11-27 01:20:48] 2025-11-27 06:20:47,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:20:48] 2025-11-27 06:20:47,781 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:20:48] 2025-11-27 06:20:47,785 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:20:48] 2025-11-27 06:20:47,789 [wrapper] pilotpid: 18831
[2025-11-27 01:20:48] 2025-11-27 06:20:47,793 [wrapper] Pilot exit status: 0
[2025-11-27 01:20:48] 2025-11-27 06:20:47,807 [wrapper] pandaids: 6897998750
[2025-11-27 01:20:48] 2025-11-27 06:20:47,857 [wrapper] cleanup supervisor_pilot 15222 18832
[2025-11-27 01:20:48] 2025-11-27 06:20:47,861 [wrapper] Test setup, not cleaning
[2025-11-27 01:20:48] 2025-11-27 06:20:47,865 [wrapper] apfmon messages muted
[2025-11-27 01:20:48] 2025-11-27 06:20:47,869 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:20:48] 2025-11-27 06:20:47,873 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:20:48]  *** Error codes and diagnostics ***
[2025-11-27 01:20:48]     "exeErrorCode": 0,
[2025-11-27 01:20:48]     "exeErrorDiag": "",
[2025-11-27 01:20:48]     "pilotErrorCode": 0,
[2025-11-27 01:20:48]     "pilotErrorDiag": "",
[2025-11-27 01:20:48]  *** Listing of results directory ***
[2025-11-27 01:20:48] total 1302496
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 01:20:48] -rwx------ 1 boincer umatlas     36292 Nov 25 21:32 runpilot2-wrapper.sh
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 21:32 queuedata.json
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:20:48] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:07 run_atlas
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:07 job.xml
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas 407791342 Nov 26 18:07 EVNT.47483658._003151.pool.root.1
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:07 start_atlas.sh
[2025-11-27 01:20:48] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:07 shared
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 18:07 input.tar.gz
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:07 boinc_lockfile
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 18:07 pandaJob.out
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas        57 Nov 26 18:07 setup.sh.local
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas    991546 Nov 26 18:07 agis_schedconf.cvmfs.json
[2025-11-27 01:20:48] drwx------ 5 boincer umatlas      4096 Nov 26 18:08 pilot3
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas       533 Nov 27 01:11 boinc_task_state.xml
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 01:13 init_data.xml
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas 910346006 Nov 27 01:19 HITS.47556173._001074.pool.root.1
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas      1063 Nov 27 01:19 memory_monitor_summary.json
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas   1516240 Nov 27 01:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas   2198542 Nov 27 01:19 log.47556173._001074.job.log.tgz.1
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas      8662 Nov 27 01:19 heartbeat.json
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas        95 Nov 27 01:20 pilot_heartbeat.json
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 01:20 boinc_mmap_file
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas      4932 Nov 27 01:20 pilotlog.txt
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas        29 Nov 27 01:20 wrapper_checkpoint.txt
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas   3651648 Nov 27 01:20 log.47556173._001074.job.log.1
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas       353 Nov 27 01:20 output.list
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas       620 Nov 27 01:20 runtime_log
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas   5867520 Nov 27 01:20 result.tar.gz
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 01:20 runtime_log.err
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas       670 Nov 27 01:20 EMRMDm0VKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYkMKDmtrK1nm.diag
[2025-11-27 01:20:48] -rw-r--r-- 1 boincer umatlas     21398 Nov 27 01:20 stderr.txt
[2025-11-27 01:20:48] HITS file was successfully produced:
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas 910346006 Nov 27 01:19 shared/HITS.pool.root.1
[2025-11-27 01:20:48]  *** Contents of shared directory: ***
[2025-11-27 01:20:48] total 1293580
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas 407791342 Nov 26 18:07 ATLAS.root_0
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:07 start_atlas.sh
[2025-11-27 01:20:48] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 18:07 input.tar.gz
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas 910346006 Nov 27 01:19 HITS.pool.root.1
[2025-11-27 01:20:48] -rw------- 1 boincer umatlas   5867520 Nov 27 01:20 result.tar.gz
01:20:49 (15145): run_atlas exited; CPU time 289706.211971
01:20:49 (15145): called boinc_finish(0)

</stderr_txt>
]]>

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