Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:28:51 (1709): wrapper (7.7.26015): starting
18:28:51 (1709): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:28:51] Arguments: --nthreads 8
[2025-11-26 18:28:51] Threads: 8
[2025-11-26 18:28:51] Checking for CVMFS
[2025-11-26 18:28:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:28:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:28:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:28:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:28:51] 2.11.2.0 2913 73961 83668 153340 1 82 18732722 20275201 1 130560 0 22534196 99.908 3573477 31012 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:28:51] CVMFS is ok
[2025-11-26 18:28:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:28:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:28:51] Further information can be found at the LHC@home message board.
[2025-11-26 18:28:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:28:51] Checking for apptainer binary...
[2025-11-26 18:28:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:28:51] Running /usr/bin/apptainer --version
[2025-11-26 18:28:51] apptainer version 1.3.2-1.el7
[2025-11-26 18:28:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:28:53] c-115-15.aglt2.org
[2025-11-26 18:28:53] apptainer works
[2025-11-26 18:28:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:28:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:28:53] Starting ATLAS job with PandaID=6897372715
[2025-11-26 18:28:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:38:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:38:21] 2025-11-27 10:37:43,138 | INFO     | monitor loop #2957: job 0:6897372715 is in state 'finished'
[2025-11-27 05:38:21] 2025-11-27 10:37:43,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:38:21] 2025-11-27 10:37:43,299 | INFO     | time since job start (40114s) is within the limit (172800.0s)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,255 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 05:38:21] 2025-11-27 10:37:45,259 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-27 05:38:21] 2025-11-27 10:37:45,262 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897372715/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,263 | INFO     | extracted standard info from prmon json
[2025-11-27 05:38:21] 2025-11-27 10:37:45,263 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:38:21] 2025-11-27 10:37:45,263 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:38:21] 2025-11-27 10:37:45,275 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:38:21] 2025-11-27 10:37:45,276 | INFO     | sum of square deviations: 87938000563.72911
[2025-11-27 05:38:21] 2025-11-27 10:37:45,284 | INFO     | sum of deviations: 635028919410.622
[2025-11-27 05:38:21] 2025-11-27 10:37:45,284 | INFO     | mean x: 1764219789.5829527
[2025-11-27 05:38:21] 2025-11-27 10:37:45,285 | INFO     | mean y: 3304983.8234398784
[2025-11-27 05:38:21] 2025-11-27 10:37:45,285 | INFO     | intersect: -12736700240.309305
[2025-11-27 05:38:21] 2025-11-27 10:37:45,285 | INFO     | chi2: 5.278467545420743
[2025-11-27 05:38:21] 2025-11-27 10:37:45,286 | INFO     | sum of square deviations: 85945652112.01689
[2025-11-27 05:38:21] 2025-11-27 10:37:45,294 | INFO     | sum of deviations: 848150059680.2188
[2025-11-27 05:38:21] 2025-11-27 10:37:45,294 | INFO     | mean x: 1764219637.0874233
[2025-11-27 05:38:21] 2025-11-27 10:37:45,294 | INFO     | mean y: 3321281.1365030673
[2025-11-27 05:38:21] 2025-11-27 10:37:45,295 | INFO     | intersect: -17406785614.49198
[2025-11-27 05:38:21] 2025-11-27 10:37:45,295 | INFO     | chi2: 2.8948065566273598
[2025-11-27 05:38:21] 2025-11-27 10:37:45,295 | INFO     | current chi2=2.8948065566273598 (change=45.15820109306713 %)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,296 | INFO     | sum of square deviations: 83983590282.46027
[2025-11-27 05:38:21] 2025-11-27 10:37:45,304 | INFO     | sum of deviations: 909507410660.3602
[2025-11-27 05:38:21] 2025-11-27 10:37:45,304 | INFO     | mean x: 1764219484.5904174
[2025-11-27 05:38:21] 2025-11-27 10:37:45,304 | INFO     | mean y: 3326036.7032457497
[2025-11-27 05:38:21] 2025-11-27 10:37:45,304 | INFO     | intersect: -19102438433.114803
[2025-11-27 05:38:21] 2025-11-27 10:37:45,305 | INFO     | chi2: 2.559062547685025
[2025-11-27 05:38:21] 2025-11-27 10:37:45,305 | INFO     | current chi2=2.559062547685025 (change=11.598150079275031 %)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,305 | INFO     | right removable region: 646
[2025-11-27 05:38:21] 2025-11-27 10:37:45,306 | INFO     | sum of square deviations: 85945418482.01703
[2025-11-27 05:38:21] 2025-11-27 10:37:45,312 | INFO     | time since job start (40116s) is within the limit (172800.0s)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,315 | INFO     | sum of deviations: 422849433685.4245
[2025-11-27 05:38:21] 2025-11-27 10:37:45,316 | INFO     | mean x: 1764219942.0874233
[2025-11-27 05:38:21] 2025-11-27 10:37:45,316 | INFO     | mean y: 3321191.7469325154
[2025-11-27 05:38:21] 2025-11-27 10:37:45,316 | INFO     | intersect: -8676599350.664412
[2025-11-27 05:38:21] 2025-11-27 10:37:45,317 | INFO     | chi2: 2.8453748763222513
[2025-11-27 05:38:21] 2025-11-27 10:37:45,317 | INFO     | current chi2=2.8453748763222513 (change=46.09467896054956 %)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,318 | INFO     | sum of square deviations: 83983242216.63997
[2025-11-27 05:38:21] 2025-11-27 10:37:45,327 | INFO     | sum of deviations: 379512684096.2044
[2025-11-27 05:38:21] 2025-11-27 10:37:45,327 | INFO     | mean x: 1764220094.5888717
[2025-11-27 05:38:21] 2025-11-27 10:37:45,327 | INFO     | mean y: 3324558.361669243
[2025-11-27 05:38:21] 2025-11-27 10:37:45,327 | INFO     | intersect: -7969026660.310651
[2025-11-27 05:38:21] 2025-11-27 10:37:45,328 | INFO     | chi2: 2.7962805543311604
[2025-11-27 05:38:21] 2025-11-27 10:37:45,328 | INFO     | current chi2=2.7962805543311604 (change=1.7254078680327367 %)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,328 | INFO     | left removable region: 20
[2025-11-27 05:38:21] 2025-11-27 10:37:45,329 | INFO     | sum of square deviations: 76068389395.05588
[2025-11-27 05:38:21] 2025-11-27 10:37:45,336 | INFO     | sum of deviations: 606866640740.3832
[2025-11-27 05:38:21] 2025-11-27 10:37:45,336 | INFO     | mean x: 1764220064.097444
[2025-11-27 05:38:21] 2025-11-27 10:37:45,336 | INFO     | mean y: 3349712.2396166134
[2025-11-27 05:38:21] 2025-11-27 10:37:45,337 | INFO     | intersect: -14071436310.444162
[2025-11-27 05:38:21] 2025-11-27 10:37:45,337 | INFO     | chi2: 0.046470181122580216
[2025-11-27 05:38:21] 2025-11-27 10:37:45,337 | INFO     | current memory leak: 7.98 B/s (using 626 data points, chi2=0.05)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | could have reported an average CPU frequency of 2332 MHz (25 samples)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | ..............................
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | . Timing measurements:
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | . get job = 0 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | . initial setup = 2 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,338 | INFO     | . payload setup = 8 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,339 | INFO     | . stage-in = 0 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,339 | INFO     | . payload execution = 40074 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,339 | INFO     | . stage-out = 3 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,339 | INFO     | . log creation = 0 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,339 | INFO     | ..............................
[2025-11-27 05:38:21] 2025-11-27 10:37:45,429 | INFO     | 
[2025-11-27 05:38:21] 2025-11-27 10:37:45,429 | INFO     | job summary report
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | --------------------------------------------------
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | PanDA job id: 6897372715
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | task id: 47556173
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | errors: (none)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | pilot state: finished 
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | transexitcode: 0
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | exeerrorcode: 0
[2025-11-27 05:38:21] 2025-11-27 10:37:45,430 | INFO     | exeerrordiag: 
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | exitcode: 0
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | exitmsg: OK
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | cpuconsumptiontime: 311668 s
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | nevents: 1000
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | neventsw: 0
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | pid: 13121
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | pgrp: 13121
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | corecount: 8
[2025-11-27 05:38:21] 2025-11-27 10:37:45,431 | INFO     | event service: False
[2025-11-27 05:38:21] 2025-11-27 10:37:45,432 | INFO     | sizes: {0: 2284263, 1: 2284291, 6: 2284553, 11: 2284581, 40087: 2328114, 40090: 2337108, 40091: 2337292, 40099: 2337602}
[2025-11-27 05:38:21] 2025-11-27 10:37:45,432 | INFO     | --------------------------------------------------
[2025-11-27 05:38:21] 2025-11-27 10:37:45,432 | INFO     | 
[2025-11-27 05:38:21] 2025-11-27 10:37:45,432 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:38:21] 2025-11-27 10:37:45,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,461 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,461 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,461 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:38:21] 2025-11-27 10:37:45,465 | INFO     | job 6897372715 has completed (purged errors)
[2025-11-27 05:38:21] 2025-11-27 10:37:45,465 | INFO     | overall cleanup function is called
[2025-11-27 05:38:21] 2025-11-27 10:37:46,480 | INFO     | --- collectZombieJob: --- 10, [13121]
[2025-11-27 05:38:21] 2025-11-27 10:37:46,480 | INFO     | zombie collector waiting for pid 13121
[2025-11-27 05:38:21] 2025-11-27 10:37:46,480 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:38:21] 2025-11-27 10:37:46,480 | INFO     | collected zombie processes
[2025-11-27 05:38:21] 2025-11-27 10:37:46,480 | INFO     | will attempt to kill all subprocesses of pid=13121
[2025-11-27 05:38:21] 2025-11-27 10:37:46,566 | INFO     | process IDs to be killed: [13121] (in reverse order)
[2025-11-27 05:38:21] 2025-11-27 10:37:46,623 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:38:21] 2025-11-27 10:37:46,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:38:21] 2025-11-27 10:37:46,628 | INFO     | did not find any defunct processes belonging to 13121
[2025-11-27 05:38:21] 2025-11-27 10:37:46,631 | INFO     | did not find any defunct processes belonging to 13121
[2025-11-27 05:38:21] 2025-11-27 10:37:46,633 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:38:21] 2025-11-27 10:37:46,634 | INFO     | ready for new job
[2025-11-27 05:38:21] 2025-11-27 10:37:46,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:38:21] 2025-11-27 10:37:46,637 | INFO     | ***************************************
[2025-11-27 05:38:21] 2025-11-27 10:37:46,637 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:38:21] 2025-11-27 10:37:46,637 | INFO     | ***************************************
[2025-11-27 05:38:21] 2025-11-27 10:37:46,637 | INFO     | 
[2025-11-27 05:38:21] 2025-11-27 10:37:46,637 | INFO     | architecture information:
[2025-11-27 05:38:21] 2025-11-27 10:37:46,638 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:38:21] 2025-11-27 10:37:46,654 | INFO     | cat /etc/os-release:
[2025-11-27 05:38:21] NAME="CentOS Linux"
[2025-11-27 05:38:21] VERSION="7 (Core)"
[2025-11-27 05:38:21] ID="centos"
[2025-11-27 05:38:21] ID_LIKE="rhel fedora"
[2025-11-27 05:38:21] VERSION_ID="7"
[2025-11-27 05:38:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:38:21] ANSI_COLOR="0;31"
[2025-11-27 05:38:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:38:21] HOME_URL="https://www.centos.org/"
[2025-11-27 05:38:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:38:21] 
[2025-11-27 05:38:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:38:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:38:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:38:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:38:21] 
[2025-11-27 05:38:21] 2025-11-27 10:37:46,654 | INFO     | ***************************************
[2025-11-27 05:38:21] 2025-11-27 10:37:47,157 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:38:21] 2025-11-27 10:37:47,177 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-27 05:38:21] 2025-11-27 10:37:47,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:38:21] 2025-11-27 10:37:47,178 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:38:21] 2025-11-27 10:37:47,178 | INFO     | update_server=False
[2025-11-27 05:38:21] 2025-11-27 10:37:47,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:38:21] 2025-11-27 10:37:47,179 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:38:21] 2025-11-27 10:37:47,179 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:38:21] 2025-11-27 10:37:47,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:38:21] 2025-11-27 10:37:47,180 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:38:21] 2025-11-27 10:37:47,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:38:21] 2025-11-27 10:37:47,182 | INFO     | aborting loop
[2025-11-27 05:38:21] 2025-11-27 10:37:47,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:38:21] 2025-11-27 10:37:47,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:38:21] 2025-11-27 10:37:47,937 | INFO     | all job control threads have been joined
[2025-11-27 05:38:21] 2025-11-27 10:37:48,186 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,187 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,188 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,232 | INFO     | all data control threads have been joined
[2025-11-27 05:38:21] 2025-11-27 10:37:48,233 | INFO     | [job] validate thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,289 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,299 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:48,506 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:38:21] 2025-11-27 10:37:48,638 | INFO     | all payload control threads have been joined
[2025-11-27 05:38:21] 2025-11-27 10:37:48,943 | INFO     | [job] control thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,238 | INFO     | [data] control thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,294 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,392 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,595 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,644 | INFO     | [payload] control thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,702 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:49,918 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:37:52,509 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:38:21] 2025-11-27 10:38:15,552 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:38:21] 2025-11-27 10:38:15,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264337454912)>', '<ExcThread(monitor, started 140263716525824)>']
[2025-11-27 05:38:21] 2025-11-27 10:38:16,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:38:21] 2025-11-27 10:38:16,330 | INFO     | [monitor] control thread has ended
[2025-11-27 05:38:21] 2025-11-27 10:38:20,941 | INFO     | all workflow threads have been joined
[2025-11-27 05:38:21] 2025-11-27 10:38:20,948 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:38:21] 2025-11-27 10:38:20,949 | INFO     | traces error code: 0
[2025-11-27 05:38:21] 2025-11-27 10:38:20,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:38:21] 2025-11-27 10:38:21,065 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:38:21] 2025-11-27 10:38:21,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:38:21] 2025-11-27 10:38:21,075 [wrapper] pilotpid: 6629
[2025-11-27 05:38:21] 2025-11-27 10:38:21,080 [wrapper] Pilot exit status: 0
[2025-11-27 05:38:21] 2025-11-27 10:38:21,098 [wrapper] pandaids: 6897372715
[2025-11-27 05:38:21] 2025-11-27 10:38:21,138 [wrapper] cleanup supervisor_pilot 22738 6630
[2025-11-27 05:38:21] 2025-11-27 10:38:21,144 [wrapper] Test setup, not cleaning
[2025-11-27 05:38:21] 2025-11-27 10:38:21,149 [wrapper] apfmon messages muted
[2025-11-27 05:38:21] 2025-11-27 10:38:21,153 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:38:21] 2025-11-27 10:38:21,158 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:38:21]  *** Error codes and diagnostics ***
[2025-11-27 05:38:21]     "exeErrorCode": 0,
[2025-11-27 05:38:21]     "exeErrorDiag": "",
[2025-11-27 05:38:21]     "pilotErrorCode": 0,
[2025-11-27 05:38:21]     "pilotErrorDiag": "",
[2025-11-27 05:38:21]  *** Listing of results directory ***
[2025-11-27 05:38:21] total 1311892
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 05:38:21] -rwx------ 1 boincer umatlas     36292 Nov 25 11:56 runpilot2-wrapper.sh
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:38:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:28 run_atlas
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:28 job.xml
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas 409405911 Nov 26 18:28 EVNT.47483658._003091.pool.root.1
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:28 start_atlas.sh
[2025-11-27 05:38:21] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:28 shared
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 18:28 input.tar.gz
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:28 boinc_lockfile
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 18:28 pandaJob.out
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas        57 Nov 26 18:28 setup.sh.local
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas    991538 Nov 26 18:29 agis_schedconf.cvmfs.json
[2025-11-27 05:38:21] drwx------ 5 boincer umatlas      4096 Nov 26 18:29 pilot3
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 05:28 init_data.xml
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas       533 Nov 27 05:28 boinc_task_state.xml
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas 915157597 Nov 27 05:37 HITS.47556173._000734.pool.root.1
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas      1064 Nov 27 05:37 memory_monitor_summary.json
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas   1516240 Nov 27 05:37 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas   1914545 Nov 27 05:37 log.47556173._000734.job.log.tgz.1
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas        95 Nov 27 05:37 pilot_heartbeat.json
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas      8653 Nov 27 05:37 heartbeat.json
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 05:37 boinc_mmap_file
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas        29 Nov 27 05:37 wrapper_checkpoint.txt
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas      4552 Nov 27 05:38 pilotlog.txt
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas   5526215 Nov 27 05:38 log.47556173._000734.job.log.1
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas       353 Nov 27 05:38 output.list
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas       620 Nov 27 05:38 runtime_log
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas   7464960 Nov 27 05:38 result.tar.gz
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas       668 Nov 27 05:38 wpILDm0VBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSSMKDmvLSGnn.diag
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 05:38 runtime_log.err
[2025-11-27 05:38:21] -rw-r--r-- 1 boincer umatlas     21233 Nov 27 05:38 stderr.txt
[2025-11-27 05:38:21] HITS file was successfully produced:
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas 915157597 Nov 27 05:37 shared/HITS.pool.root.1
[2025-11-27 05:38:21]  *** Contents of shared directory: ***
[2025-11-27 05:38:21] total 1301420
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas 409405911 Nov 26 18:28 ATLAS.root_0
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:28 start_atlas.sh
[2025-11-27 05:38:21] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 18:28 input.tar.gz
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas 915157597 Nov 27 05:37 HITS.pool.root.1
[2025-11-27 05:38:21] -rw------- 1 boincer umatlas   7464960 Nov 27 05:38 result.tar.gz
05:38:22 (1709): run_atlas exited; CPU time 309765.720346
05:38:22 (1709): called boinc_finish(0)

</stderr_txt>
]]>

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