Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:56:46 (2754356): wrapper (7.7.26015): starting
03:56:46 (2754356): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 03:56:46] Arguments: --nthreads 12
[2025-11-27 03:56:46] Threads: 12
[2025-11-27 03:56:46] Checking for CVMFS
[2025-11-27 03:56:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:56:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:56:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:56:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:56:46] 2.13.3.0 13543 7890 92476 153343 1 81 2494185 4097025 1044 130560 0 6132330 99.944 588706 17909 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-27 03:56:46] CVMFS is ok
[2025-11-27 03:56:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:56:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:56:46] Further information can be found at the LHC@home message board.
[2025-11-27 03:56:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:56:46] Checking for apptainer binary...
[2025-11-27 03:56:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-27 03:56:46] apptainer is not installed, using version from CVMFS
[2025-11-27 03:56:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:56:46] pckelar5.cern.ch
[2025-11-27 03:56:46] apptainer works
[2025-11-27 03:56:46] Set ATHENA_PROC_NUMBER=12
[2025-11-27 03:56:46] Set ATHENA_CORE_NUMBER=12
[2025-11-27 03:56:46] Starting ATLAS job with PandaID=6897998776
[2025-11-27 03:56:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:38:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:38:13] 2025-11-27 14:37:26,990 | INFO     | time since job start (42029s) is within the limit (172800.0s)
[2025-11-27 15:38:13] 2025-11-27 14:37:27,760 | INFO     | monitor loop #3020: job 0:6897998776 is in state 'finished'
[2025-11-27 15:38:13] 2025-11-27 14:37:27,760 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,446 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 15:38:13] 2025-11-27 14:37:28,452 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2808.5212083333336
[2025-11-27 15:38:13] 2025-11-27 14:37:28,457 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6897998776/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,458 | INFO     | extracted standard info from prmon json
[2025-11-27 15:38:13] 2025-11-27 14:37:28,458 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:38:13] 2025-11-27 14:37:28,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:38:13] 2025-11-27 14:37:28,478 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:38:13] 2025-11-27 14:37:28,479 | INFO     | sum of square deviations: 101422536463.79129
[2025-11-27 15:38:13] 2025-11-27 14:37:28,495 | INFO     | sum of deviations: 1330058399532.4534
[2025-11-27 15:38:13] 2025-11-27 14:37:28,496 | INFO     | mean x: 1764233232.9825835
[2025-11-27 15:38:13] 2025-11-27 14:37:28,496 | INFO     | mean y: 3550274.4542815676
[2025-11-27 15:38:13] 2025-11-27 14:37:28,496 | INFO     | intersect: -23132660986.64461
[2025-11-27 15:38:13] 2025-11-27 14:37:28,497 | INFO     | chi2: 6.268686796717653
[2025-11-27 15:38:13] 2025-11-27 14:37:28,498 | INFO     | sum of square deviations: 99230683238.92847
[2025-11-27 15:38:13] 2025-11-27 14:37:28,514 | INFO     | sum of deviations: 1616600529114.5022
[2025-11-27 15:38:13] 2025-11-27 14:37:28,514 | INFO     | mean x: 1764233080.4897661
[2025-11-27 15:38:13] 2025-11-27 14:37:28,514 | INFO     | mean y: 3570199.571637427
[2025-11-27 15:38:13] 2025-11-27 14:37:28,514 | INFO     | intersect: -28738145954.229805
[2025-11-27 15:38:13] 2025-11-27 14:37:28,515 | INFO     | chi2: 3.007313526161632
[2025-11-27 15:38:13] 2025-11-27 14:37:28,515 | INFO     | current chi2=3.007313526161632 (change=52.02641918980079 %)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,517 | INFO     | sum of square deviations: 97070561483.97635
[2025-11-27 15:38:13] 2025-11-27 14:37:28,532 | INFO     | sum of deviations: 1663866551188.8325
[2025-11-27 15:38:13] 2025-11-27 14:37:28,532 | INFO     | mean x: 1764232927.994109
[2025-11-27 15:38:13] 2025-11-27 14:37:28,532 | INFO     | mean y: 3573520.4580265097
[2025-11-27 15:38:13] 2025-11-27 14:37:28,532 | INFO     | intersect: -30236780635.522564
[2025-11-27 15:38:13] 2025-11-27 14:37:28,533 | INFO     | chi2: 2.697818795617764
[2025-11-27 15:38:13] 2025-11-27 14:37:28,533 | INFO     | current chi2=2.697818795617764 (change=10.29140220504012 %)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,534 | INFO     | right removable region: 678
[2025-11-27 15:38:13] 2025-11-27 14:37:28,535 | INFO     | sum of square deviations: 99230312054.90607
[2025-11-27 15:38:13] 2025-11-27 14:37:28,550 | INFO     | sum of deviations: 1083975029609.9672
[2025-11-27 15:38:13] 2025-11-27 14:37:28,550 | INFO     | mean x: 1764233385.4883041
[2025-11-27 15:38:13] 2025-11-27 14:37:28,550 | INFO     | mean y: 3567366.245614035
[2025-11-27 15:38:13] 2025-11-27 14:37:28,551 | INFO     | intersect: -19268617681.559307
[2025-11-27 15:38:13] 2025-11-27 14:37:28,552 | INFO     | chi2: 3.8833379677093576
[2025-11-27 15:38:13] 2025-11-27 14:37:28,552 | INFO     | current chi2=3.8833379677093576 (change=38.05181063212933 %)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,553 | INFO     | sum of square deviations: 97070069339.90587
[2025-11-27 15:38:13] 2025-11-27 14:37:28,568 | INFO     | sum of deviations: 1015411512458.702
[2025-11-27 15:38:13] 2025-11-27 14:37:28,568 | INFO     | mean x: 1764233537.988218
[2025-11-27 15:38:13] 2025-11-27 14:37:28,568 | INFO     | mean y: 3572204.71281296
[2025-11-27 15:38:13] 2025-11-27 14:37:28,568 | INFO     | intersect: -18451375415.30009
[2025-11-27 15:38:13] 2025-11-27 14:37:28,569 | INFO     | chi2: 3.8106234110887796
[2025-11-27 15:38:13] 2025-11-27 14:37:28,570 | INFO     | current chi2=3.8106234110887796 (change=1.8724756182751137 %)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,570 | INFO     | left removable region: 20
[2025-11-27 15:38:13] 2025-11-27 14:37:28,571 | INFO     | sum of square deviations: 88339533544.5
[2025-11-27 15:38:13] 2025-11-27 14:37:28,585 | INFO     | sum of deviations: 1234590705625.5
[2025-11-27 15:38:13] 2025-11-27 14:37:28,586 | INFO     | mean x: 1764233507.5
[2025-11-27 15:38:13] 2025-11-27 14:37:28,586 | INFO     | mean y: 3604034.916413374
[2025-11-27 15:38:13] 2025-11-27 14:37:28,586 | INFO     | intersect: -24652472395.6364
[2025-11-27 15:38:13] 2025-11-27 14:37:28,587 | INFO     | chi2: 0.15294830442076554
[2025-11-27 15:38:13] 2025-11-27 14:37:28,587 | INFO     | current memory leak: 13.98 B/s (using 658 data points, chi2=0.15)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,588 | INFO     | could have reported an average CPU frequency of 2804 MHz (26 samples)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,588 | INFO     | ..............................
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . Timing measurements:
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . get job = 0 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . initial setup = 1 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . payload setup = 8 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . stage-in = 0 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,589 | INFO     | . payload execution = 41989 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,590 | INFO     | . stage-out = 2 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,590 | INFO     | . log creation = 0 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,590 | INFO     | ..............................
[2025-11-27 15:38:13] 2025-11-27 14:37:28,865 | INFO     | 
[2025-11-27 15:38:13] 2025-11-27 14:37:28,865 | INFO     | job summary report
[2025-11-27 15:38:13] 2025-11-27 14:37:28,865 | INFO     | --------------------------------------------------
[2025-11-27 15:38:13] 2025-11-27 14:37:28,865 | INFO     | PanDA job id: 6897998776
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | task id: 47556161
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | errors: (none)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | pilot state: finished 
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | transexitcode: 0
[2025-11-27 15:38:13] 2025-11-27 14:37:28,866 | INFO     | exeerrorcode: 0
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | exeerrordiag: 
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | exitcode: 0
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | exitmsg: OK
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | cpuconsumptiontime: 490453 s
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | nevents: 1000
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | neventsw: 0
[2025-11-27 15:38:13] 2025-11-27 14:37:28,867 | INFO     | pid: 2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | pgrp: 2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | corecount: 12
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | event service: False
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 12: 2284582, 42001: 2328421, 42002: 2328420, 42005: 2337598, 42008: 2337654, 42014: 2337900}
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | --------------------------------------------------
[2025-11-27 15:38:13] 2025-11-27 14:37:28,868 | INFO     | 
[2025-11-27 15:38:13] 2025-11-27 14:37:28,869 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 15:38:13] 2025-11-27 14:37:28,889 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,890 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,891 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,893 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:38:13] 2025-11-27 14:37:28,893 | INFO     | job 6897998776 has completed (purged errors)
[2025-11-27 15:38:13] 2025-11-27 14:37:28,893 | INFO     | overall cleanup function is called
[2025-11-27 15:38:13] 2025-11-27 14:37:29,915 | INFO     | --- collectZombieJob: --- 10, [2765857]
[2025-11-27 15:38:13] 2025-11-27 14:37:29,915 | INFO     | zombie collector waiting for pid 2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:29,915 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:38:13] 2025-11-27 14:37:29,915 | INFO     | collected zombie processes
[2025-11-27 15:38:13] 2025-11-27 14:37:29,916 | INFO     | will attempt to kill all subprocesses of pid=2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:30,108 | INFO     | process IDs to be killed: [2765857] (in reverse order)
[2025-11-27 15:38:13] 2025-11-27 14:37:30,172 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:38:13] 2025-11-27 14:37:30,173 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:38:13] 2025-11-27 14:37:30,180 | INFO     | did not find any defunct processes belonging to 2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:30,186 | INFO     | did not find any defunct processes belonging to 2765857
[2025-11-27 15:38:13] 2025-11-27 14:37:30,187 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:38:13] 2025-11-27 14:37:30,187 | INFO     | ready for new job
[2025-11-27 15:38:13] 2025-11-27 14:37:30,188 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:38:13] 2025-11-27 14:37:30,190 | INFO     | ***************************************
[2025-11-27 15:38:13] 2025-11-27 14:37:30,190 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:38:13] 2025-11-27 14:37:30,191 | INFO     | ***************************************
[2025-11-27 15:38:13] 2025-11-27 14:37:30,191 | INFO     | 
[2025-11-27 15:38:13] 2025-11-27 14:37:30,192 | INFO     | architecture information:
[2025-11-27 15:38:13] 2025-11-27 14:37:30,193 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:38:13] 2025-11-27 14:37:30,207 | INFO     | cat /etc/os-release:
[2025-11-27 15:38:13] NAME="CentOS Linux"
[2025-11-27 15:38:13] VERSION="7 (Core)"
[2025-11-27 15:38:13] ID="centos"
[2025-11-27 15:38:13] ID_LIKE="rhel fedora"
[2025-11-27 15:38:13] VERSION_ID="7"
[2025-11-27 15:38:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:38:13] ANSI_COLOR="0;31"
[2025-11-27 15:38:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:38:13] HOME_URL="https://www.centos.org/"
[2025-11-27 15:38:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:38:13] 
[2025-11-27 15:38:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:38:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:38:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:38:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:38:13] 
[2025-11-27 15:38:13] 2025-11-27 14:37:30,207 | INFO     | ***************************************
[2025-11-27 15:38:13] 2025-11-27 14:37:30,709 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 15:38:13] 2025-11-27 14:37:30,729 | INFO     | sufficient remaining disk space (1815011655680 B)
[2025-11-27 15:38:13] 2025-11-27 14:37:30,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:38:13] 2025-11-27 14:37:30,729 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:38:13] 2025-11-27 14:37:30,730 | INFO     | update_server=False
[2025-11-27 15:38:13] 2025-11-27 14:37:30,730 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:38:13] 2025-11-27 14:37:30,730 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:38:13] 2025-11-27 14:37:31,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:38:13] 2025-11-27 14:37:31,269 | INFO     | aborting loop
[2025-11-27 15:38:13] 2025-11-27 14:37:31,614 | INFO     | all data control threads have been joined
[2025-11-27 15:38:13] 2025-11-27 14:37:31,614 | INFO     | all job control threads have been joined
[2025-11-27 15:38:13] 2025-11-27 14:37:31,735 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:31,736 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:31,759 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:31,832 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:38:13] 2025-11-27 14:37:31,834 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:31,999 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,058 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,098 | INFO     | all payload control threads have been joined
[2025-11-27 15:38:13] 2025-11-27 14:37:32,273 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,382 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,620 | INFO     | [data] control thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,620 | INFO     | [job] control thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:38:13] 2025-11-27 14:37:32,703 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:32,927 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:33,103 | INFO     | [payload] control thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:33,173 | INFO     | [job] validate thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:33,838 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:37:36,690 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:38:13] 2025-11-27 14:38:00,318 | INFO     | PID=2758275 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:38:13] 2025-11-27 14:38:00,318 | INFO     | .. there are 2 such processes running
[2025-11-27 15:38:13] 2025-11-27 14:38:00,319 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:38:13] 2025-11-27 14:38:00,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:38:13] 2025-11-27 14:38:00,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:38:13] 2025-11-27 14:38:07,343 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:38:13] 2025-11-27 14:38:08,665 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660470392640)>', '<ExcThread(monitor, started 140659709179648)>']
[2025-11-27 15:38:13] 2025-11-27 14:38:09,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:38:13] 2025-11-27 14:38:09,366 | INFO     | [monitor] control thread has ended
[2025-11-27 15:38:13] 2025-11-27 14:38:13,690 | INFO     | all workflow threads have been joined
[2025-11-27 15:38:13] 2025-11-27 14:38:13,691 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:38:13] 2025-11-27 14:38:13,691 | INFO     | traces error code: 0
[2025-11-27 15:38:13] 2025-11-27 14:38:13,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:38:13] 2025-11-27 14:38:13,802 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:38:13] 2025-11-27 14:38:13,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:38:13] 2025-11-27 14:38:13,808 [wrapper] pilotpid: 2758275
[2025-11-27 15:38:13] 2025-11-27 14:38:13,811 [wrapper] Pilot exit status: 0
[2025-11-27 15:38:13] 2025-11-27 14:38:13,821 [wrapper] pandaids: 6897998776
[2025-11-27 15:38:13] 2025-11-27 14:38:13,860 [wrapper] cleanup supervisor_pilot 2991922 2758276
[2025-11-27 15:38:13] 2025-11-27 14:38:13,863 [wrapper] Test setup, not cleaning
[2025-11-27 15:38:13] 2025-11-27 14:38:13,866 [wrapper] apfmon messages muted
[2025-11-27 15:38:13] 2025-11-27 14:38:13,868 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:38:13] 2025-11-27 14:38:13,871 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:38:13]  *** Error codes and diagnostics ***
[2025-11-27 15:38:13]     "exeErrorCode": 0,
[2025-11-27 15:38:13]     "exeErrorDiag": "",
[2025-11-27 15:38:13]     "pilotErrorCode": 0,
[2025-11-27 15:38:13]     "pilotErrorDiag": "",
[2025-11-27 15:38:13]  *** Listing of results directory ***
[2025-11-27 15:38:13] total 1310772
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc    576529 Nov 26 02:44 pilot3.tar.gz
[2025-11-27 15:38:13] -rwx------ 1 boinc boinc     36292 Nov 26 03:32 runpilot2-wrapper.sh
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc      5112 Nov 26 03:32 queuedata.json
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc       100 Nov 27 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:38:13] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 03:56 run_atlas
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc       105 Nov 27 03:56 job.xml
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc      6296 Nov 27 03:56 init_data.xml
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc 408368591 Nov 27 03:56 EVNT.47483658._002380.pool.root.1
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:56 start_atlas.sh
[2025-11-27 15:38:13] drwxrwx--x 2 boinc boinc        68 Nov 27 03:56 shared
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc    590106 Nov 27 03:56 input.tar.gz
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:56 boinc_lockfile
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc      2785 Nov 27 03:56 pandaJob.out
[2025-11-27 15:38:13] -rw------- 1 boinc boinc    991554 Nov 27 03:56 agis_schedconf.cvmfs.json
[2025-11-27 15:38:13] drwx------ 5 boinc boinc      4096 Nov 27 03:56 pilot3
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc       533 Nov 27 15:27 boinc_task_state.xml
[2025-11-27 15:38:13] -rw------- 1 boinc boinc 913424469 Nov 27 15:36 HITS.47556161._003630.pool.root.1
[2025-11-27 15:38:13] -rw------- 1 boinc boinc      1037 Nov 27 15:37 memory_monitor_summary.json
[2025-11-27 15:38:13] -rw------- 1 boinc boinc   1516240 Nov 27 15:37 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:38:13] -rw------- 1 boinc boinc   2387230 Nov 27 15:37 log.47556161._003630.job.log.tgz.1
[2025-11-27 15:38:13] -rw------- 1 boinc boinc      8610 Nov 27 15:37 heartbeat.json
[2025-11-27 15:38:13] -rw------- 1 boinc boinc        95 Nov 27 15:38 pilot_heartbeat.json
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc      8192 Nov 27 15:38 boinc_mmap_file
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc        29 Nov 27 15:38 wrapper_checkpoint.txt
[2025-11-27 15:38:13] -rw------- 1 boinc boinc      4825 Nov 27 15:38 pilotlog.txt
[2025-11-27 15:38:13] -rw------- 1 boinc boinc   5881003 Nov 27 15:38 log.47556161._003630.job.log.1
[2025-11-27 15:38:13] -rw------- 1 boinc boinc       353 Nov 27 15:38 output.list
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc       620 Nov 27 15:38 runtime_log
[2025-11-27 15:38:13] -rw------- 1 boinc boinc   8284160 Nov 27 15:38 result.tar.gz
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc      8842 Nov 27 15:38 runtime_log.err
[2025-11-27 15:38:13] -rw------- 1 boinc boinc       665 Nov 27 15:38 gJCMDm0VKi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQkMKDmeNMjem.diag
[2025-11-27 15:38:13] -rw-r--r-- 1 boinc boinc     21439 Nov 27 15:38 stderr.txt
[2025-11-27 15:38:13] HITS file was successfully produced:
[2025-11-27 15:38:13] -rw------- 1 boinc boinc 913424469 Nov 27 15:36 shared/HITS.pool.root.1
[2025-11-27 15:38:13]  *** Contents of shared directory: ***
[2025-11-27 15:38:13] total 1299508
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc 408368591 Nov 27 03:56 ATLAS.root_0
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:56 start_atlas.sh
[2025-11-27 15:38:13] -rw-r--r-- 2 boinc boinc    590106 Nov 27 03:56 input.tar.gz
[2025-11-27 15:38:13] -rw------- 1 boinc boinc 913424469 Nov 27 15:36 HITS.pool.root.1
[2025-11-27 15:38:13] -rw------- 1 boinc boinc   8284160 Nov 27 15:38 result.tar.gz
15:38:15 (2754356): run_atlas exited; CPU time 490257.330028
15:38:15 (2754356): called boinc_finish(0)

</stderr_txt>
]]>

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