Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:08 (3092128): wrapper (7.7.26015): starting
18:02:08 (3092128): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:02:08] Arguments: --nthreads 8
[2025-11-26 18:02:08] Threads: 8
[2025-11-26 18:02:08] Checking for CVMFS
[2025-11-26 18:02:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:02:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:02:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:02:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:02:09] 2.13.3.0 11772 30638 386080 153337 1 1185 21935196 32935936 52257 16776704 0 176135367 99.508 226988639 38813 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:02:09] CVMFS is ok
[2025-11-26 18:02:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:02:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:02:09] Further information can be found at the LHC@home message board.
[2025-11-26 18:02:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:02:09] Checking for apptainer binary...
[2025-11-26 18:02:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:02:09] Running /usr/bin/apptainer --version
[2025-11-26 18:02:09] apptainer version 1.4.4-1.el9
[2025-11-26 18:02:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:02:09] c7-3-28.aglt2.org
[2025-11-26 18:02:09] apptainer works
[2025-11-26 18:02:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:02:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:02:09] Starting ATLAS job with PandaID=6897881218
[2025-11-26 18:02:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:47:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:47:44] 2025-11-27 10:47:06,159 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:47:44] 2025-11-27 10:47:06,165 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3214.4631979166675
[2025-11-27 05:47:44] 2025-11-27 10:47:06,183 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6897881218/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,184 | INFO     | extracted standard info from prmon json
[2025-11-27 05:47:44] 2025-11-27 10:47:06,184 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:47:44] 2025-11-27 10:47:06,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:47:44] 2025-11-27 10:47:06,194 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:47:44] 2025-11-27 10:47:06,195 | INFO     | sum of square deviations: 103200235119.94753
[2025-11-27 05:47:44] 2025-11-27 10:47:06,205 | INFO     | sum of deviations: 918987848931.0913
[2025-11-27 05:47:44] 2025-11-27 10:47:06,206 | INFO     | mean x: 1764219282.6277056
[2025-11-27 05:47:44] 2025-11-27 10:47:06,206 | INFO     | mean y: 2928213.8181818184
[2025-11-27 05:47:44] 2025-11-27 10:47:06,206 | INFO     | intersect: -15707269361.801573
[2025-11-27 05:47:44] 2025-11-27 10:47:06,207 | INFO     | chi2: 6.176731094976661
[2025-11-27 05:47:44] 2025-11-27 10:47:06,208 | INFO     | sum of square deviations: 100982689002.96368
[2025-11-27 05:47:44] 2025-11-27 10:47:06,223 | INFO     | sum of deviations: 1138104661608.8906
[2025-11-27 05:47:44] 2025-11-27 10:47:06,223 | INFO     | mean x: 1764219130.1322675
[2025-11-27 05:47:44] 2025-11-27 10:47:06,224 | INFO     | mean y: 2943270.6715116277
[2025-11-27 05:47:44] 2025-11-27 10:47:06,224 | INFO     | intersect: -19880326187.960033
[2025-11-27 05:47:44] 2025-11-27 10:47:06,224 | INFO     | chi2: 3.351467062900999
[2025-11-27 05:47:44] 2025-11-27 10:47:06,225 | INFO     | current chi2=3.351467062900999 (change=45.740440835660785 %)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,225 | INFO     | sum of square deviations: 98797059916.49184
[2025-11-27 05:47:44] 2025-11-27 10:47:06,236 | INFO     | sum of deviations: 1179124155597.9397
[2025-11-27 05:47:44] 2025-11-27 10:47:06,236 | INFO     | mean x: 1764218977.6339679
[2025-11-27 05:47:44] 2025-11-27 10:47:06,236 | INFO     | mean y: 2946118.907759883
[2025-11-27 05:47:44] 2025-11-27 10:47:06,236 | INFO     | intersect: -21052672479.973915
[2025-11-27 05:47:44] 2025-11-27 10:47:06,237 | INFO     | chi2: 3.0460206968679175
[2025-11-27 05:47:44] 2025-11-27 10:47:06,237 | INFO     | current chi2=3.0460206968679175 (change=9.113810767058231 %)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,237 | INFO     | right removable region: 682
[2025-11-27 05:47:44] 2025-11-27 10:47:06,238 | INFO     | sum of square deviations: 100982423652.96356
[2025-11-27 05:47:44] 2025-11-27 10:47:06,249 | INFO     | sum of deviations: 714406924325.105
[2025-11-27 05:47:44] 2025-11-27 10:47:06,249 | INFO     | mean x: 1764219435.1322675
[2025-11-27 05:47:44] 2025-11-27 10:47:06,250 | INFO     | mean y: 2942260.05377907
[2025-11-27 05:47:44] 2025-11-27 10:47:06,250 | INFO     | intersect: -12478146377.893848
[2025-11-27 05:47:44] 2025-11-27 10:47:06,251 | INFO     | chi2: 3.767185449123823
[2025-11-27 05:47:44] 2025-11-27 10:47:06,251 | INFO     | current chi2=3.767185449123823 (change=39.01004607133448 %)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,252 | INFO     | sum of square deviations: 98796696478.49191
[2025-11-27 05:47:44] 2025-11-27 10:47:06,262 | INFO     | sum of deviations: 648569855422.7101
[2025-11-27 05:47:44] 2025-11-27 10:47:06,262 | INFO     | mean x: 1764219587.6339679
[2025-11-27 05:47:44] 2025-11-27 10:47:06,263 | INFO     | mean y: 2946852.82284041
[2025-11-27 05:47:44] 2025-11-27 10:47:06,263 | INFO     | intersect: -11578610867.933268
[2025-11-27 05:47:44] 2025-11-27 10:47:06,263 | INFO     | chi2: 3.62929019353896
[2025-11-27 05:47:44] 2025-11-27 10:47:06,264 | INFO     | current chi2=3.62929019353896 (change=3.660431838229116 %)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,264 | INFO     | left removable region: 20
[2025-11-27 05:47:44] 2025-11-27 10:47:06,264 | INFO     | sum of square deviations: 89961279054.49083
[2025-11-27 05:47:44] 2025-11-27 10:47:06,278 | INFO     | sum of deviations: 799890848190.7378
[2025-11-27 05:47:44] 2025-11-27 10:47:06,278 | INFO     | mean x: 1764219557.1374621
[2025-11-27 05:47:44] 2025-11-27 10:47:06,278 | INFO     | mean y: 2972947.0468277945
[2025-11-27 05:47:44] 2025-11-27 10:47:06,278 | INFO     | intersect: -15683587902.078037
[2025-11-27 05:47:44] 2025-11-27 10:47:06,279 | INFO     | chi2: 0.33568591154398825
[2025-11-27 05:47:44] 2025-11-27 10:47:06,279 | INFO     | current memory leak: 8.89 B/s (using 662 data points, chi2=0.34)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | could have reported an average CPU frequency of 3144 MHz (27 samples)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | ..............................
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | . Timing measurements:
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | . get job = 0 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | . initial setup = 2 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | . payload setup = 8 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,280 | INFO     | . stage-in = 0 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,281 | INFO     | . payload execution = 42236 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,281 | INFO     | . stage-out = 3 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,281 | INFO     | . log creation = 0 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,281 | INFO     | ..............................
[2025-11-27 05:47:44] 2025-11-27 10:47:06,376 | INFO     | 
[2025-11-27 05:47:44] 2025-11-27 10:47:06,378 | INFO     | job summary report
[2025-11-27 05:47:44] 2025-11-27 10:47:06,378 | INFO     | --------------------------------------------------
[2025-11-27 05:47:44] 2025-11-27 10:47:06,378 | INFO     | PanDA job id: 6897881218
[2025-11-27 05:47:44] 2025-11-27 10:47:06,378 | INFO     | task id: 47556161
[2025-11-27 05:47:44] 2025-11-27 10:47:06,378 | INFO     | errors: (none)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | pilot state: finished 
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | transexitcode: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | exeerrorcode: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | exeerrordiag: 
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | exitcode: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | exitmsg: OK
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | cpuconsumptiontime: 201490 s
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | nevents: 1000
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | neventsw: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | pid: 3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | pgrp: 3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | corecount: 8
[2025-11-27 05:47:44] 2025-11-27 10:47:06,379 | INFO     | event service: False
[2025-11-27 05:47:44] 2025-11-27 10:47:06,380 | INFO     | sizes: {0: 2283435, 1: 2284291, 8: 2284553, 12: 2284581, 42248: 2329764, 42253: 2338758, 42254: 2338942, 42264: 2339188}
[2025-11-27 05:47:44] 2025-11-27 10:47:06,380 | INFO     | --------------------------------------------------
[2025-11-27 05:47:44] 2025-11-27 10:47:06,380 | INFO     | 
[2025-11-27 05:47:44] 2025-11-27 10:47:06,380 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 05:47:44] 2025-11-27 10:47:06,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,493 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,493 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,493 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,495 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,495 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:47:44] 2025-11-27 10:47:06,495 | INFO     | job 6897881218 has completed (purged errors)
[2025-11-27 05:47:44] 2025-11-27 10:47:06,495 | INFO     | overall cleanup function is called
[2025-11-27 05:47:44] 2025-11-27 10:47:07,153 | INFO     | PID=3098778 has CPU usage=19.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 05:47:44] 2025-11-27 10:47:07,153 | INFO     | .. there are 75 such processes running
[2025-11-27 05:47:44] 2025-11-27 10:47:07,518 | INFO     | --- collectZombieJob: --- 10, [3107466]
[2025-11-27 05:47:44] 2025-11-27 10:47:07,518 | INFO     | zombie collector waiting for pid 3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:07,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:47:44] 2025-11-27 10:47:07,518 | INFO     | collected zombie processes
[2025-11-27 05:47:44] 2025-11-27 10:47:07,518 | INFO     | will attempt to kill all subprocesses of pid=3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:08,193 | INFO     | process IDs to be killed: [3107466] (in reverse order)
[2025-11-27 05:47:44] 2025-11-27 10:47:08,481 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:47:44] 2025-11-27 10:47:08,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:47:44] 2025-11-27 10:47:08,514 | INFO     | did not find any defunct processes belonging to 3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:08,545 | INFO     | did not find any defunct processes belonging to 3107466
[2025-11-27 05:47:44] 2025-11-27 10:47:08,546 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:47:44] 2025-11-27 10:47:08,546 | INFO     | ready for new job
[2025-11-27 05:47:44] 2025-11-27 10:47:08,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:47:44] 2025-11-27 10:47:08,550 | INFO     | ***************************************
[2025-11-27 05:47:44] 2025-11-27 10:47:08,550 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:47:44] 2025-11-27 10:47:08,550 | INFO     | ***************************************
[2025-11-27 05:47:44] 2025-11-27 10:47:08,550 | INFO     | 
[2025-11-27 05:47:44] 2025-11-27 10:47:08,555 | INFO     | architecture information:
[2025-11-27 05:47:44] 2025-11-27 10:47:08,556 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:47:44] 2025-11-27 10:47:08,589 | INFO     | cat /etc/os-release:
[2025-11-27 05:47:44] NAME="CentOS Linux"
[2025-11-27 05:47:44] VERSION="7 (Core)"
[2025-11-27 05:47:44] ID="centos"
[2025-11-27 05:47:44] ID_LIKE="rhel fedora"
[2025-11-27 05:47:44] VERSION_ID="7"
[2025-11-27 05:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:47:44] ANSI_COLOR="0;31"
[2025-11-27 05:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:47:44] HOME_URL="https://www.centos.org/"
[2025-11-27 05:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:47:44] 
[2025-11-27 05:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:47:44] 
[2025-11-27 05:47:44] 2025-11-27 10:47:08,590 | INFO     | ***************************************
[2025-11-27 05:47:44] 2025-11-27 10:47:09,092 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 05:47:44] 2025-11-27 10:47:09,116 | INFO     | sufficient remaining disk space (67269296128 B)
[2025-11-27 05:47:44] 2025-11-27 10:47:09,116 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:47:44] 2025-11-27 10:47:09,116 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:47:44] 2025-11-27 10:47:09,116 | INFO     | update_server=False
[2025-11-27 05:47:44] 2025-11-27 10:47:09,117 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:47:44] 2025-11-27 10:47:09,117 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:47:44] 2025-11-27 10:47:09,117 | INFO     | aborting loop
[2025-11-27 05:47:44] 2025-11-27 10:47:09,500 | INFO     | all job control threads have been joined
[2025-11-27 05:47:44] 2025-11-27 10:47:09,656 | INFO     | all data control threads have been joined
[2025-11-27 05:47:44] 2025-11-27 10:47:10,049 | INFO     | all payload control threads have been joined
[2025-11-27 05:47:44] 2025-11-27 10:47:10,123 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,125 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,447 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,505 | INFO     | [job] control thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,510 | INFO     | [job] validate thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,603 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,613 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:47:44] 2025-11-27 10:47:10,662 | INFO     | [data] control thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:10,850 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:11,055 | INFO     | [payload] control thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:11,252 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:11,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:47:44] 2025-11-27 10:47:11,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:47:44] 2025-11-27 10:47:11,451 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:11,569 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:12,399 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:12,634 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:15,476 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:47:44] 2025-11-27 10:47:26,476 [wrapper] supervise_pilot (15 min periods counter: 48)
[2025-11-27 05:47:44] 2025-11-27 10:47:36,721 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:47:44] 2025-11-27 10:47:38,735 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393496606528)>', '<ExcThread(monitor, started 140392859158272)>']
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | INFO     | PID=3098778 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | INFO     | .. there are 75 such processes running
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:47:44] 2025-11-27 10:47:40,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:47:44] 2025-11-27 10:47:40,094 | INFO     | [monitor] control thread has ended
[2025-11-27 05:47:44] 2025-11-27 10:47:43,762 | INFO     | all workflow threads have been joined
[2025-11-27 05:47:44] 2025-11-27 10:47:43,762 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:47:44] 2025-11-27 10:47:43,762 | INFO     | traces error code: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:43,762 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:47:44] 2025-11-27 10:47:43,910 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:47:44] 2025-11-27 10:47:43,918 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:47:44] 2025-11-27 10:47:43,935 [wrapper] pilotpid: 3098778
[2025-11-27 05:47:44] 2025-11-27 10:47:43,938 [wrapper] Pilot exit status: 0
[2025-11-27 05:47:44] 2025-11-27 10:47:44,009 [wrapper] pandaids: 6897881218
[2025-11-27 05:47:44] 2025-11-27 10:47:44,152 [wrapper] cleanup supervisor_pilot 3081486 3098779
[2025-11-27 05:47:44] 2025-11-27 10:47:44,157 [wrapper] Test setup, not cleaning
[2025-11-27 05:47:44] 2025-11-27 10:47:44,161 [wrapper] apfmon messages muted
[2025-11-27 05:47:44] 2025-11-27 10:47:44,170 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:47:44] 2025-11-27 10:47:44,174 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:47:44]  *** Error codes and diagnostics ***
[2025-11-27 05:47:44]     "exeErrorCode": 0,
[2025-11-27 05:47:44]     "exeErrorDiag": "",
[2025-11-27 05:47:44]     "pilotErrorCode": 0,
[2025-11-27 05:47:44]     "pilotErrorDiag": "",
[2025-11-27 05:47:44]  *** Listing of results directory ***
[2025-11-27 05:47:44] total 1317772
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 21:00 queuedata.json
[2025-11-27 05:47:44] -rwx------. 1 boincer umatlas     36292 Nov 25 21:05 runpilot2-wrapper.sh
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:47:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:02 run_atlas
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:02 job.xml
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas 409181829 Nov 26 18:02 EVNT.47483658._002363.pool.root.1
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:02 start_atlas.sh
[2025-11-27 05:47:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:02 shared
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 18:02 input.tar.gz
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:02 boinc_lockfile
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 18:02 pandaJob.out
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas        57 Nov 26 18:02 setup.sh.local
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas    991546 Nov 26 18:02 agis_schedconf.cvmfs.json
[2025-11-27 05:47:44] drwx------. 5 boincer umatlas      4096 Nov 26 18:02 pilot3
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:38 boinc_task_state.xml
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 05:45 init_data.xml
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas 921503548 Nov 27 05:46 HITS.47556161._003457.pool.root.1
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas      1071 Nov 27 05:46 memory_monitor_summary.json
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas        95 Nov 27 05:46 pilot_heartbeat.json
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas   1921209 Nov 27 05:46 log.47556161._003457.job.log.tgz.1
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas      8621 Nov 27 05:47 heartbeat.json
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:47 boinc_mmap_file
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:47 wrapper_checkpoint.txt
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas      4824 Nov 27 05:47 pilotlog.txt
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas   5476098 Nov 27 05:47 log.47556161._003457.job.log.1
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas       353 Nov 27 05:47 output.list
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:47 runtime_log
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas   7413760 Nov 27 05:47 result.tar.gz
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 05:47 runtime_log.err
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas       663 Nov 27 05:47 Kp0NDmD5Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkhMKDmUF2g1n.diag
[2025-11-27 05:47:44] -rw-r--r--. 1 boincer umatlas     21384 Nov 27 05:47 stderr.txt
[2025-11-27 05:47:44] HITS file was successfully produced:
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas 921503548 Nov 27 05:46 shared/HITS.pool.root.1
[2025-11-27 05:47:44]  *** Contents of shared directory: ***
[2025-11-27 05:47:44] total 1307344
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas 409181829 Nov 26 18:02 ATLAS.root_0
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:02 start_atlas.sh
[2025-11-27 05:47:44] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 18:02 input.tar.gz
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas 921503548 Nov 27 05:46 HITS.pool.root.1
[2025-11-27 05:47:44] -rw-------. 1 boincer umatlas   7413760 Nov 27 05:47 result.tar.gz
05:47:45 (3092128): run_atlas exited; CPU time 203172.486013
05:47:45 (3092128): called boinc_finish(0)

</stderr_txt>
]]>

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