Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:01 (20814): wrapper (7.7.26015): starting
18:04:01 (20814): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 18:04:01] Arguments: --nthreads 12
[2025-11-26 18:04:01] Threads: 12
[2025-11-26 18:04:01] Checking for CVMFS
[2025-11-26 18:04:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:04:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:04:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:04:01] 2.11.2.0 3165 73938 90568 153337 3 81 19668671 20275201 1 130560 0 31076641 99.917 4001001 36925 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:04:01] CVMFS is ok
[2025-11-26 18:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:04:01] Further information can be found at the LHC@home message board.
[2025-11-26 18:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:04:01] Checking for apptainer binary...
[2025-11-26 18:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:04:01] Running /usr/bin/apptainer --version
[2025-11-26 18:04:01] apptainer version 1.3.2-1.el7
[2025-11-26 18:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:04:03] c-115-40.aglt2.org
[2025-11-26 18:04:03] apptainer works
[2025-11-26 18:04:03] Set ATHENA_PROC_NUMBER=12
[2025-11-26 18:04:03] Set ATHENA_CORE_NUMBER=12
[2025-11-26 18:04:03] Starting ATLAS job with PandaID=6897881195
[2025-11-26 18:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:32:02]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:32:02] 2025-11-27 05:31:15,566 | INFO     | monitor loop #1735: job 0:6897881195 is in state 'finished'
[2025-11-27 00:32:02] 2025-11-27 05:31:15,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:32:02] 2025-11-27 05:31:15,834 | INFO     | time since job start (23217s) is within the limit (172800.0s)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,625 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 00:32:02] 2025-11-27 05:31:16,629 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1873.25
[2025-11-27 00:32:02] 2025-11-27 05:31:16,632 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897881195/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,632 | INFO     | extracted standard info from prmon json
[2025-11-27 00:32:02] 2025-11-27 05:31:16,632 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:32:02] 2025-11-27 05:31:16,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:32:02] 2025-11-27 05:31:16,638 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:32:02] 2025-11-27 05:31:16,639 | INFO     | sum of square deviations: 17014884410.976418
[2025-11-27 00:32:02] 2025-11-27 05:31:16,641 | INFO     | sum of deviations: 319706623425.11334
[2025-11-27 00:32:02] 2025-11-27 05:31:16,642 | INFO     | mean x: 1764209847.8078947
[2025-11-27 00:32:02] 2025-11-27 05:31:16,642 | INFO     | mean y: 3999408.0289473683
[2025-11-27 00:32:02] 2025-11-27 05:31:16,642 | INFO     | intersect: -33145186906.28629
[2025-11-27 00:32:02] 2025-11-27 05:31:16,642 | INFO     | chi2: 5.730933571608906
[2025-11-27 00:32:02] 2025-11-27 05:31:16,643 | INFO     | sum of square deviations: 16352079760.496046
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | sum of deviations: 480730931248.9197
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | mean x: 1764209695.312
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | mean y: 4036412.24
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | intersect: -51861547792.81056
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | chi2: 2.995587327370135
[2025-11-27 00:32:02] 2025-11-27 05:31:16,646 | INFO     | current chi2=2.995587327370135 (change=47.72950532509572 %)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,647 | INFO     | sum of square deviations: 15706717297.502708
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | sum of deviations: 535933537643.54047
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | mean x: 1764209542.8162162
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | mean y: 4049381.743243243
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | intersect: -60193065235.98262
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | chi2: 2.415008575144264
[2025-11-27 00:32:02] 2025-11-27 05:31:16,650 | INFO     | current chi2=2.415008575144264 (change=19.381132605323465 %)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,651 | INFO     | right removable region: 369
[2025-11-27 00:32:02] 2025-11-27 05:31:16,651 | INFO     | sum of square deviations: 16352008390.496046
[2025-11-27 00:32:02] 2025-11-27 05:31:16,654 | INFO     | sum of deviations: 179410999863.6718
[2025-11-27 00:32:02] 2025-11-27 05:31:16,654 | INFO     | mean x: 1764210000.312
[2025-11-27 00:32:02] 2025-11-27 05:31:16,654 | INFO     | mean y: 4031565.250666667
[2025-11-27 00:32:02] 2025-11-27 05:31:16,654 | INFO     | intersect: -19352531406.514233
[2025-11-27 00:32:02] 2025-11-27 05:31:16,655 | INFO     | chi2: 3.5002205262191373
[2025-11-27 00:32:02] 2025-11-27 05:31:16,655 | INFO     | current chi2=3.5002205262191373 (change=38.924077857763706 %)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,655 | INFO     | sum of square deviations: 15706574557.502714
[2025-11-27 00:32:02] 2025-11-27 05:31:16,658 | INFO     | sum of deviations: 140337482505.27512
[2025-11-27 00:32:02] 2025-11-27 05:31:16,658 | INFO     | mean x: 1764210152.8162162
[2025-11-27 00:32:02] 2025-11-27 05:31:16,658 | INFO     | mean y: 4040783.754054054
[2025-11-27 00:32:02] 2025-11-27 05:31:16,658 | INFO     | intersect: -15759091435.180864
[2025-11-27 00:32:02] 2025-11-27 05:31:16,659 | INFO     | chi2: 3.4100588055337644
[2025-11-27 00:32:02] 2025-11-27 05:31:16,659 | INFO     | current chi2=3.4100588055337644 (change=2.575886862270464 %)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,659 | INFO     | left removable region: 20
[2025-11-27 00:32:02] 2025-11-27 05:31:16,659 | INFO     | sum of square deviations: 13181172511.106089
[2025-11-27 00:32:02] 2025-11-27 05:31:16,662 | INFO     | sum of deviations: 305077993574.5587
[2025-11-27 00:32:02] 2025-11-27 05:31:16,662 | INFO     | mean x: 1764210122.3295128
[2025-11-27 00:32:02] 2025-11-27 05:31:16,662 | INFO     | mean y: 4105379.169054441
[2025-11-27 00:32:02] 2025-11-27 05:31:16,662 | INFO     | intersect: -40828505218.31187
[2025-11-27 00:32:02] 2025-11-27 05:31:16,662 | INFO     | chi2: 0.035375599114975065
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | current memory leak: 23.14 B/s (using 349 data points, chi2=0.04)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | could have reported an average CPU frequency of 2602 MHz (16 samples)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | ..............................
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | . Timing measurements:
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | . get job = 0 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,663 | INFO     | . initial setup = 2 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | . payload setup = 7 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | . stage-in = 0 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | . payload execution = 23178 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | . stage-out = 3 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | . log creation = 0 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,664 | INFO     | ..............................
[2025-11-27 00:32:02] 2025-11-27 05:31:16,739 | INFO     | 
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | job summary report
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | --------------------------------------------------
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | PanDA job id: 6897881195
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | task id: 47556173
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | errors: (none)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | pilot state: finished 
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | transexitcode: 0
[2025-11-27 00:32:02] 2025-11-27 05:31:16,740 | INFO     | exeerrorcode: 0
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | exeerrordiag: 
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | exitcode: 0
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | exitmsg: OK
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | cpuconsumptiontime: 267501 s
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | nevents: 1000
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | neventsw: 0
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | pid: 31375
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | pgrp: 31375
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | corecount: 12
[2025-11-27 00:32:02] 2025-11-27 05:31:16,741 | INFO     | event service: False
[2025-11-27 00:32:02] 2025-11-27 05:31:16,742 | INFO     | sizes: {0: 2284037, 1: 2284292, 6: 2284554, 12: 2284582, 23189: 2320432, 23190: 2320431, 23193: 2329609, 23195: 2329665, 23202: 2329911}
[2025-11-27 00:32:02] 2025-11-27 05:31:16,742 | INFO     | --------------------------------------------------
[2025-11-27 00:32:02] 2025-11-27 05:31:16,742 | INFO     | 
[2025-11-27 00:32:02] 2025-11-27 05:31:16,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 00:32:02] 2025-11-27 05:31:16,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:32:02] 2025-11-27 05:31:16,767 | INFO     | job 6897881195 has completed (purged errors)
[2025-11-27 00:32:02] 2025-11-27 05:31:16,767 | INFO     | overall cleanup function is called
[2025-11-27 00:32:02] 2025-11-27 05:31:16,949 | INFO     | PID=24931 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 00:32:02] 2025-11-27 05:31:17,781 | INFO     | --- collectZombieJob: --- 10, [31375]
[2025-11-27 00:32:02] 2025-11-27 05:31:17,781 | INFO     | zombie collector waiting for pid 31375
[2025-11-27 00:32:02] 2025-11-27 05:31:17,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:32:02] 2025-11-27 05:31:17,781 | INFO     | collected zombie processes
[2025-11-27 00:32:02] 2025-11-27 05:31:17,782 | INFO     | will attempt to kill all subprocesses of pid=31375
[2025-11-27 00:32:02] 2025-11-27 05:31:17,868 | INFO     | process IDs to be killed: [31375] (in reverse order)
[2025-11-27 00:32:02] 2025-11-27 05:31:17,919 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:32:02] 2025-11-27 05:31:17,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:32:02] 2025-11-27 05:31:17,923 | INFO     | did not find any defunct processes belonging to 31375
[2025-11-27 00:32:02] 2025-11-27 05:31:17,925 | INFO     | did not find any defunct processes belonging to 31375
[2025-11-27 00:32:02] 2025-11-27 05:31:17,927 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:32:02] 2025-11-27 05:31:17,927 | INFO     | ready for new job
[2025-11-27 00:32:02] 2025-11-27 05:31:17,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:32:02] 2025-11-27 05:31:17,929 | INFO     | ***************************************
[2025-11-27 00:32:02] 2025-11-27 05:31:17,929 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:32:02] 2025-11-27 05:31:17,929 | INFO     | ***************************************
[2025-11-27 00:32:02] 2025-11-27 05:31:17,929 | INFO     | 
[2025-11-27 00:32:02] 2025-11-27 05:31:17,930 | INFO     | architecture information:
[2025-11-27 00:32:02] 2025-11-27 05:31:17,930 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:32:02] 2025-11-27 05:31:17,947 | INFO     | cat /etc/os-release:
[2025-11-27 00:32:02] NAME="CentOS Linux"
[2025-11-27 00:32:02] VERSION="7 (Core)"
[2025-11-27 00:32:02] ID="centos"
[2025-11-27 00:32:02] ID_LIKE="rhel fedora"
[2025-11-27 00:32:02] VERSION_ID="7"
[2025-11-27 00:32:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:32:02] ANSI_COLOR="0;31"
[2025-11-27 00:32:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:32:02] HOME_URL="https://www.centos.org/"
[2025-11-27 00:32:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:32:02] 
[2025-11-27 00:32:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:32:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:32:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:32:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:32:02] 
[2025-11-27 00:32:02] 2025-11-27 05:31:17,947 | INFO     | ***************************************
[2025-11-27 00:32:02] 2025-11-27 05:31:18,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 00:32:02] 2025-11-27 05:31:18,469 | INFO     | sufficient remaining disk space (17588813824 B)
[2025-11-27 00:32:02] 2025-11-27 05:31:18,469 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:32:02] 2025-11-27 05:31:18,469 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:32:02] 2025-11-27 05:31:18,469 | INFO     | update_server=False
[2025-11-27 00:32:02] 2025-11-27 05:31:18,470 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:32:02] 2025-11-27 05:31:18,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:32:02] 2025-11-27 05:31:18,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:32:02] 2025-11-27 05:31:19,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:32:02] 2025-11-27 05:31:19,075 | INFO     | aborting loop
[2025-11-27 00:32:02] 2025-11-27 05:31:19,317 | INFO     | all data control threads have been joined
[2025-11-27 00:32:02] 2025-11-27 05:31:19,475 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:19,476 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:19,476 | INFO     | all payload control threads have been joined
[2025-11-27 00:32:02] 2025-11-27 05:31:19,606 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:19,643 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:19,685 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:19,724 | INFO     | all job control threads have been joined
[2025-11-27 00:32:02] 2025-11-27 05:31:19,857 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,080 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,116 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:32:02] 2025-11-27 05:31:20,322 | INFO     | [data] control thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,384 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,476 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,482 | INFO     | [payload] control thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,729 | INFO     | [job] control thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,832 | INFO     | [job] validate thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:20,838 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:24,179 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:32:02] 2025-11-27 05:31:49,146 | INFO     | PID=24931 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:32:02] 2025-11-27 05:31:49,146 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:32:02] 2025-11-27 05:31:49,146 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:32:02] 2025-11-27 05:31:49,147 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:32:02] 2025-11-27 05:31:56,605 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:32:02] 2025-11-27 05:31:56,988 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139642856712000)>', '<ExcThread(monitor, started 139642036795136)>']
[2025-11-27 00:32:02] 2025-11-27 05:31:57,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:32:02] 2025-11-27 05:31:57,184 | INFO     | [monitor] control thread has ended
[2025-11-27 00:32:02] 2025-11-27 05:32:02,013 | INFO     | all workflow threads have been joined
[2025-11-27 00:32:02] 2025-11-27 05:32:02,023 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:32:02] 2025-11-27 05:32:02,024 | INFO     | traces error code: 0
[2025-11-27 00:32:02] 2025-11-27 05:32:02,024 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:32:02] 2025-11-27 05:32:02,114 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:32:02] 2025-11-27 05:32:02,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:32:02] 2025-11-27 05:32:02,121 [wrapper] pilotpid: 24931
[2025-11-27 00:32:02] 2025-11-27 05:32:02,124 [wrapper] Pilot exit status: 0
[2025-11-27 00:32:02] 2025-11-27 05:32:02,140 [wrapper] pandaids: 6897881195
[2025-11-27 00:32:02] 2025-11-27 05:32:02,182 [wrapper] cleanup supervisor_pilot  1972 24932
[2025-11-27 00:32:02] 2025-11-27 05:32:02,185 [wrapper] Test setup, not cleaning
[2025-11-27 00:32:02] 2025-11-27 05:32:02,189 [wrapper] apfmon messages muted
[2025-11-27 00:32:02] 2025-11-27 05:32:02,192 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:32:02] 2025-11-27 05:32:02,196 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:32:02]  *** Error codes and diagnostics ***
[2025-11-27 00:32:02]     "exeErrorCode": 0,
[2025-11-27 00:32:02]     "exeErrorDiag": "",
[2025-11-27 00:32:02]     "pilotErrorCode": 0,
[2025-11-27 00:32:02]     "pilotErrorDiag": "",
[2025-11-27 00:32:02]  *** Listing of results directory ***
[2025-11-27 00:32:02] total 1312184
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 21:00 queuedata.json
[2025-11-27 00:32:02] -rwx------ 1 boincer umatlas     36292 Nov 25 21:03 runpilot2-wrapper.sh
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:32:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:03 run_atlas
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:03 job.xml
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas 409748043 Nov 26 18:04 EVNT.47483658._003144.pool.root.1
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:04 start_atlas.sh
[2025-11-27 00:32:02] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:04 shared
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 18:04 input.tar.gz
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:04 boinc_lockfile
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 18:04 pandaJob.out
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas        57 Nov 26 18:04 setup.sh.local
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas    991546 Nov 26 18:04 agis_schedconf.cvmfs.json
[2025-11-27 00:32:02] drwx------ 5 boincer umatlas      4096 Nov 26 18:04 pilot3
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas       533 Nov 27 00:20 boinc_task_state.xml
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas 919169041 Nov 27 00:30 HITS.47556173._001002.pool.root.1
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas      1072 Nov 27 00:31 memory_monitor_summary.json
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas   1516240 Nov 27 00:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas   2149366 Nov 27 00:31 log.47556173._001002.job.log.tgz.1
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas        95 Nov 27 00:31 pilot_heartbeat.json
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas      8667 Nov 27 00:31 heartbeat.json
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas      5957 Nov 27 00:31 init_data.xml
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 00:31 boinc_mmap_file
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas        29 Nov 27 00:31 wrapper_checkpoint.txt
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas      4746 Nov 27 00:32 pilotlog.txt
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas   3269539 Nov 27 00:32 log.47556173._001002.job.log.1
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas       353 Nov 27 00:32 output.list
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas       620 Nov 27 00:32 runtime_log
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas   5437440 Nov 27 00:32 result.tar.gz
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas       669 Nov 27 00:32 vpJLDm53Ji8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmchMKDmtT6MTm.diag
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 00:32 runtime_log.err
[2025-11-27 00:32:02] -rw-r--r-- 1 boincer umatlas     21429 Nov 27 00:32 stderr.txt
[2025-11-27 00:32:02] HITS file was successfully produced:
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas 919169041 Nov 27 00:30 shared/HITS.pool.root.1
[2025-11-27 00:32:02]  *** Contents of shared directory: ***
[2025-11-27 00:32:02] total 1303688
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas 409748043 Nov 26 18:04 ATLAS.root_0
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:04 start_atlas.sh
[2025-11-27 00:32:02] -rw-r--r-- 2 boincer umatlas    590103 Nov 26 18:04 input.tar.gz
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas 919169041 Nov 27 00:30 HITS.pool.root.1
[2025-11-27 00:32:02] -rw------- 1 boincer umatlas   5437440 Nov 27 00:32 result.tar.gz
00:32:03 (20814): run_atlas exited; CPU time 264225.941440
00:32:03 (20814): called boinc_finish(0)

</stderr_txt>
]]>

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