Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:50:38 (11268): wrapper (7.7.26015): starting
17:50:38 (11268): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:50:38] Arguments: --nthreads 8
[2025-11-26 17:50:38] Threads: 8
[2025-11-26 17:50:38] Checking for CVMFS
[2025-11-26 17:50:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:50:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:50:38] 2.11.2.0 2877 59661 80644 153337 3 81 18271592 20275201 1 130560 0 14225138 99.894 2747305 27658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 17:50:38] CVMFS is ok
[2025-11-26 17:50:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:50:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:50:38] Further information can be found at the LHC@home message board.
[2025-11-26 17:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:50:38] Checking for apptainer binary...
[2025-11-26 17:50:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:50:38] Running /usr/bin/apptainer --version
[2025-11-26 17:50:38] apptainer version 1.3.2-1.el7
[2025-11-26 17:50:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:50:39] c-204-32.aglt2.org
[2025-11-26 17:50:39] apptainer works
[2025-11-26 17:50:39] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:50:39] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:50:39] Starting ATLAS job with PandaID=6897880995
[2025-11-26 17:50:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:11:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:11:20] 2025-11-27 11:10:45,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:11:20] 2025-11-27 11:10:46,412 | INFO     | time since job start (44389s) is within the limit (172800.0s)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,615 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 06:11:20] 2025-11-27 11:10:47,623 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-27 06:11:20] 2025-11-27 11:10:47,625 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897880995/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,626 | INFO     | extracted standard info from prmon json
[2025-11-27 06:11:20] 2025-11-27 11:10:47,626 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:11:20] 2025-11-27 11:10:47,626 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:11:20] 2025-11-27 11:10:47,639 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:11:20] 2025-11-27 11:10:47,640 | INFO     | sum of square deviations: 119147141310.67404
[2025-11-27 06:11:20] 2025-11-27 11:10:47,651 | INFO     | sum of deviations: 761626098328.1956
[2025-11-27 06:11:20] 2025-11-27 11:10:47,651 | INFO     | mean x: 1764219632.6341128
[2025-11-27 06:11:20] 2025-11-27 11:10:47,652 | INFO     | mean y: 3239188.0646492434
[2025-11-27 06:11:20] 2025-11-27 11:10:47,652 | INFO     | intersect: -11274209021.066204
[2025-11-27 06:11:20] 2025-11-27 11:10:47,653 | INFO     | chi2: 6.1416087661848415
[2025-11-27 06:11:20] 2025-11-27 11:10:47,654 | INFO     | sum of square deviations: 116705831486.14958
[2025-11-27 06:11:20] 2025-11-27 11:10:47,665 | INFO     | sum of deviations: 1026609345526.0505
[2025-11-27 06:11:20] 2025-11-27 11:10:47,665 | INFO     | mean x: 1764219480.1385043
[2025-11-27 06:11:20] 2025-11-27 11:10:47,665 | INFO     | mean y: 3255734.879501385
[2025-11-27 06:11:20] 2025-11-27 11:10:47,665 | INFO     | intersect: -15515799164.140213
[2025-11-27 06:11:20] 2025-11-27 11:10:47,666 | INFO     | chi2: 3.13721103438117
[2025-11-27 06:11:20] 2025-11-27 11:10:47,666 | INFO     | current chi2=3.13721103438117 (change=48.91874175290392 %)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,667 | INFO     | sum of square deviations: 114298103686.5974
[2025-11-27 06:11:20] 2025-11-27 11:10:47,678 | INFO     | sum of deviations: 1140316716802.4937
[2025-11-27 06:11:20] 2025-11-27 11:10:47,678 | INFO     | mean x: 1764219327.6429567
[2025-11-27 06:11:20] 2025-11-27 11:10:47,678 | INFO     | mean y: 3262926.087866109
[2025-11-27 06:11:20] 2025-11-27 11:10:47,678 | INFO     | intersect: -17597805915.20752
[2025-11-27 06:11:20] 2025-11-27 11:10:47,679 | INFO     | chi2: 2.4300450468442922
[2025-11-27 06:11:20] 2025-11-27 11:10:47,679 | INFO     | current chi2=2.4300450468442922 (change=22.541231042060573 %)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,679 | INFO     | right removable region: 716
[2025-11-27 06:11:20] 2025-11-27 11:10:47,680 | INFO     | sum of square deviations: 116705550276.14955
[2025-11-27 06:11:20] 2025-11-27 11:10:47,692 | INFO     | monitor loop #3259: job 0:6897880995 is in state 'finished'
[2025-11-27 06:11:20] 2025-11-27 11:10:47,692 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,692 | INFO     | sum of deviations: 536586339169.50793
[2025-11-27 06:11:20] 2025-11-27 11:10:47,693 | INFO     | mean x: 1764219785.1385043
[2025-11-27 06:11:20] 2025-11-27 11:10:47,693 | INFO     | mean y: 3253221.5249307477
[2025-11-27 06:11:20] 2025-11-27 11:10:47,693 | INFO     | intersect: -8108239623.141846
[2025-11-27 06:11:20] 2025-11-27 11:10:47,694 | INFO     | chi2: 3.890707166235015
[2025-11-27 06:11:20] 2025-11-27 11:10:47,694 | INFO     | current chi2=3.890707166235015 (change=36.65003235541627 %)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,695 | INFO     | sum of square deviations: 114297541266.59734
[2025-11-27 06:11:20] 2025-11-27 11:10:47,707 | INFO     | sum of deviations: 495896419408.5938
[2025-11-27 06:11:20] 2025-11-27 11:10:47,707 | INFO     | mean x: 1764219937.6429567
[2025-11-27 06:11:20] 2025-11-27 11:10:47,708 | INFO     | mean y: 3255796.6820083684
[2025-11-27 06:11:20] 2025-11-27 11:10:47,708 | INFO     | intersect: -7651067650.974425
[2025-11-27 06:11:20] 2025-11-27 11:10:47,709 | INFO     | chi2: 3.859673421457434
[2025-11-27 06:11:20] 2025-11-27 11:10:47,709 | INFO     | current chi2=3.859673421457434 (change=0.7976376389079866 %)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,709 | INFO     | left removable region: 20
[2025-11-27 06:11:20] 2025-11-27 11:10:47,710 | INFO     | sum of square deviations: 104546160375.92944
[2025-11-27 06:11:20] 2025-11-27 11:10:47,720 | INFO     | sum of deviations: 816204404971.0382
[2025-11-27 06:11:20] 2025-11-27 11:10:47,720 | INFO     | mean x: 1764219907.1566093
[2025-11-27 06:11:20] 2025-11-27 11:10:47,720 | INFO     | mean y: 3284817.1005747127
[2025-11-27 06:11:20] 2025-11-27 11:10:47,721 | INFO     | intersect: -13770191457.69484
[2025-11-27 06:11:20] 2025-11-27 11:10:47,721 | INFO     | chi2: 0.08192428556737429
[2025-11-27 06:11:20] 2025-11-27 11:10:47,722 | INFO     | current memory leak: 7.81 B/s (using 696 data points, chi2=0.08)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,722 | INFO     | could have reported an average CPU frequency of 2159 MHz (28 samples)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,722 | INFO     | ..............................
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . Timing measurements:
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . get job = 0 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . initial setup = 2 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . payload setup = 9 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . stage-in = 0 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . payload execution = 44345 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . stage-out = 3 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,723 | INFO     | . log creation = 0 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,724 | INFO     | ..............................
[2025-11-27 06:11:20] 2025-11-27 11:10:47,814 | INFO     | 
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | job summary report
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | --------------------------------------------------
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | PanDA job id: 6897880995
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | task id: 47556161
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | errors: (none)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,815 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:11:20] 2025-11-27 11:10:47,816 | INFO     | pilot state: finished 
[2025-11-27 06:11:20] 2025-11-27 11:10:47,816 | INFO     | transexitcode: 0
[2025-11-27 06:11:20] 2025-11-27 11:10:47,816 | INFO     | exeerrorcode: 0
[2025-11-27 06:11:20] 2025-11-27 11:10:47,816 | INFO     | exeerrordiag: 
[2025-11-27 06:11:20] 2025-11-27 11:10:47,816 | INFO     | exitcode: 0
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | exitmsg: OK
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | cpuconsumptiontime: 343864 s
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | nevents: 1000
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | neventsw: 0
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | pid: 21508
[2025-11-27 06:11:20] 2025-11-27 11:10:47,817 | INFO     | pgrp: 21508
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | corecount: 8
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | event service: False
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | sizes: {0: 2284264, 6: 2284526, 11: 2284554, 44357: 2330256, 44362: 2339250, 44365: 2339306, 44373: 2339680}
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | --------------------------------------------------
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | 
[2025-11-27 06:11:20] 2025-11-27 11:10:47,818 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 06:11:20] 2025-11-27 11:10:47,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,857 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:11:20] 2025-11-27 11:10:47,857 | INFO     | job 6897880995 has completed (purged errors)
[2025-11-27 06:11:20] 2025-11-27 11:10:47,857 | INFO     | overall cleanup function is called
[2025-11-27 06:11:20] 2025-11-27 11:10:48,868 | INFO     | --- collectZombieJob: --- 10, [21508]
[2025-11-27 06:11:20] 2025-11-27 11:10:48,868 | INFO     | zombie collector waiting for pid 21508
[2025-11-27 06:11:20] 2025-11-27 11:10:48,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:11:20] 2025-11-27 11:10:48,869 | INFO     | collected zombie processes
[2025-11-27 06:11:20] 2025-11-27 11:10:48,869 | INFO     | will attempt to kill all subprocesses of pid=21508
[2025-11-27 06:11:20] 2025-11-27 11:10:48,959 | INFO     | process IDs to be killed: [21508] (in reverse order)
[2025-11-27 06:11:20] 2025-11-27 11:10:49,019 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:11:20] 2025-11-27 11:10:49,020 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:11:20] 2025-11-27 11:10:49,025 | INFO     | did not find any defunct processes belonging to 21508
[2025-11-27 06:11:20] 2025-11-27 11:10:49,028 | INFO     | did not find any defunct processes belonging to 21508
[2025-11-27 06:11:20] 2025-11-27 11:10:49,031 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:11:20] 2025-11-27 11:10:49,032 | INFO     | ready for new job
[2025-11-27 06:11:20] 2025-11-27 11:10:49,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:11:20] 2025-11-27 11:10:49,036 | INFO     | ***************************************
[2025-11-27 06:11:20] 2025-11-27 11:10:49,036 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:11:20] 2025-11-27 11:10:49,036 | INFO     | ***************************************
[2025-11-27 06:11:20] 2025-11-27 11:10:49,036 | INFO     | 
[2025-11-27 06:11:20] 2025-11-27 11:10:49,037 | INFO     | architecture information:
[2025-11-27 06:11:20] 2025-11-27 11:10:49,038 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:11:20] 2025-11-27 11:10:49,057 | INFO     | cat /etc/os-release:
[2025-11-27 06:11:20] NAME="CentOS Linux"
[2025-11-27 06:11:20] VERSION="7 (Core)"
[2025-11-27 06:11:20] ID="centos"
[2025-11-27 06:11:20] ID_LIKE="rhel fedora"
[2025-11-27 06:11:20] VERSION_ID="7"
[2025-11-27 06:11:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:11:20] ANSI_COLOR="0;31"
[2025-11-27 06:11:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:11:20] HOME_URL="https://www.centos.org/"
[2025-11-27 06:11:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:11:20] 
[2025-11-27 06:11:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:11:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:11:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:11:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:11:20] 
[2025-11-27 06:11:20] 2025-11-27 11:10:49,058 | INFO     | ***************************************
[2025-11-27 06:11:20] 2025-11-27 11:10:49,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 06:11:20] 2025-11-27 11:10:49,582 | INFO     | sufficient remaining disk space (17430478848 B)
[2025-11-27 06:11:20] 2025-11-27 11:10:49,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:11:20] 2025-11-27 11:10:49,583 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:11:20] 2025-11-27 11:10:49,583 | INFO     | update_server=False
[2025-11-27 06:11:20] 2025-11-27 11:10:49,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:11:20] 2025-11-27 11:10:49,584 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:11:20] 2025-11-27 11:10:49,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:11:20] 2025-11-27 11:10:49,585 | INFO     | aborting loop
[2025-11-27 06:11:20] 2025-11-27 11:10:49,666 | INFO     | all job control threads have been joined
[2025-11-27 06:11:20] 2025-11-27 11:10:50,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:11:20] 2025-11-27 11:10:50,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:11:20] 2025-11-27 11:10:50,178 | INFO     | all data control threads have been joined
[2025-11-27 06:11:20] 2025-11-27 11:10:50,586 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:50,589 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:50,590 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:50,674 | INFO     | [job] control thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:50,773 | INFO     | all payload control threads have been joined
[2025-11-27 06:11:20] 2025-11-27 11:10:50,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:50,919 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,127 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,184 | INFO     | [data] control thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,216 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,545 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,778 | INFO     | [payload] control thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,809 | INFO     | [job] validate thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:51,915 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:52,035 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:52,038 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:10:54,019 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:11:20] 2025-11-27 11:11:10,480 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:11:20] 2025-11-27 11:11:10,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660516034368)>', '<ExcThread(monitor, started 139659787106048)>']
[2025-11-27 06:11:20] 2025-11-27 11:11:15,688 | INFO     | all workflow threads have been joined
[2025-11-27 06:11:20] 2025-11-27 11:11:15,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:11:20] 2025-11-27 11:11:15,694 | INFO     | traces error code: 0
[2025-11-27 06:11:20] 2025-11-27 11:11:15,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:11:20] 2025-11-27 11:11:19,603 | INFO     | PID=14955 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 06:11:20] 2025-11-27 11:11:19,604 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:11:20] 2025-11-27 11:11:19,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:11:20] 2025-11-27 11:11:19,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:11:20] 2025-11-27 11:11:19,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:11:20] 2025-11-27 11:11:19,605 | INFO     | [monitor] control thread has ended
[2025-11-27 06:11:20] 2025-11-27 11:11:19,761 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:11:20] 2025-11-27 11:11:19,766 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:11:20] 2025-11-27 11:11:19,771 [wrapper] pilotpid: 14955
[2025-11-27 06:11:20] 2025-11-27 11:11:19,776 [wrapper] Pilot exit status: 0
[2025-11-27 06:11:20] 2025-11-27 11:11:19,794 [wrapper] pandaids: 6897880995
[2025-11-27 06:11:20] 2025-11-27 11:11:19,851 [wrapper] cleanup supervisor_pilot  3673 14956
[2025-11-27 06:11:20] 2025-11-27 11:11:19,856 [wrapper] Test setup, not cleaning
[2025-11-27 06:11:20] 2025-11-27 11:11:19,861 [wrapper] apfmon messages muted
[2025-11-27 06:11:20] 2025-11-27 11:11:19,866 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:11:20] 2025-11-27 11:11:19,870 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:11:20]  *** Error codes and diagnostics ***
[2025-11-27 06:11:20]     "exeErrorCode": 0,
[2025-11-27 06:11:20]     "exeErrorDiag": "",
[2025-11-27 06:11:20]     "pilotErrorCode": 0,
[2025-11-27 06:11:20]     "pilotErrorDiag": "",
[2025-11-27 06:11:20]  *** Listing of results directory ***
[2025-11-27 06:11:20] total 1318536
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 20:46 queuedata.json
[2025-11-27 06:11:20] -rwx------ 1 boincer umatlas     36292 Nov 25 20:49 runpilot2-wrapper.sh
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas       100 Nov 26 17:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:11:20] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 17:50 run_atlas
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas       105 Nov 26 17:50 job.xml
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas 408446726 Nov 26 17:50 EVNT.47483658._002355.pool.root.1
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 17:50 start_atlas.sh
[2025-11-27 06:11:20] drwxrwx--x 2 boincer umatlas      4096 Nov 26 17:50 shared
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 17:50 input.tar.gz
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas         0 Nov 26 17:50 boinc_lockfile
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 17:50 pandaJob.out
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas        57 Nov 26 17:50 setup.sh.local
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas    991546 Nov 26 17:50 agis_schedconf.cvmfs.json
[2025-11-27 06:11:20] drwx------ 5 boincer umatlas      4096 Nov 26 17:50 pilot3
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas       533 Nov 27 05:59 boinc_task_state.xml
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 06:01 init_data.xml
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas 921651793 Nov 27 06:09 HITS.47556161._003379.pool.root.1
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas      1062 Nov 27 06:10 memory_monitor_summary.json
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas   1516240 Nov 27 06:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas   1975435 Nov 27 06:10 log.47556161._003379.job.log.tgz.1
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas      8657 Nov 27 06:10 heartbeat.json
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:11 wrapper_checkpoint.txt
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:11 boinc_mmap_file
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas        95 Nov 27 06:11 pilot_heartbeat.json
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas       745 Nov 27 06:11 pilotlog.txt
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas   6104537 Nov 27 06:11 log.47556161._003379.job.log.1
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas       353 Nov 27 06:11 output.list
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:11 runtime_log
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas   8099840 Nov 27 06:11 result.tar.gz
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas       668 Nov 27 06:11 XrPKDmDqJi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDlJKDm6OW1ln.diag
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 06:11 runtime_log.err
[2025-11-27 06:11:20] -rw-r--r-- 1 boincer umatlas     21323 Nov 27 06:11 stderr.txt
[2025-11-27 06:11:20] HITS file was successfully produced:
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas 921651793 Nov 27 06:09 shared/HITS.pool.root.1
[2025-11-27 06:11:20]  *** Contents of shared directory: ***
[2025-11-27 06:11:20] total 1307444
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas 408446726 Nov 26 17:50 ATLAS.root_0
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 17:50 start_atlas.sh
[2025-11-27 06:11:20] -rw-r--r-- 2 boincer umatlas    590099 Nov 26 17:50 input.tar.gz
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas 921651793 Nov 27 06:09 HITS.pool.root.1
[2025-11-27 06:11:20] -rw------- 1 boincer umatlas   8099840 Nov 27 06:11 result.tar.gz
06:11:21 (11268): run_atlas exited; CPU time 341736.177459
06:11:21 (11268): called boinc_finish(0)

</stderr_txt>
]]>

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