Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:06 (3123482): wrapper (7.7.26015): starting
18:04:06 (3123482): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:04:06] Arguments: --nthreads 8
[2025-11-26 18:04:06] Threads: 8
[2025-11-26 18:04:06] Checking for CVMFS
[2025-11-26 18:04:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:04:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:04:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:04:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:04:06] 2.13.3.0 11772 30640 389968 153337 3 1188 22150752 32935937 53607 16776704 0 176214420 99.507 227038817 38805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:04:06] CVMFS is ok
[2025-11-26 18:04:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:04:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:04:06] Further information can be found at the LHC@home message board.
[2025-11-26 18:04:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:04:06] Checking for apptainer binary...
[2025-11-26 18:04:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:04:06] Running /usr/bin/apptainer --version
[2025-11-26 18:04:06] apptainer version 1.4.4-1.el9
[2025-11-26 18:04:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:04:07] c7-3-28.aglt2.org
[2025-11-26 18:04:07] apptainer works
[2025-11-26 18:04:07] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:04:07] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:04:07] Starting ATLAS job with PandaID=6897372782
[2025-11-26 18:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:56:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:56:25] 2025-11-27 07:55:31,400 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:56:25] 2025-11-27 07:55:31,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:56:25] 2025-11-27 07:55:31,410 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:56:25] 2025-11-27 07:55:31,410 | INFO     | sum of square deviations: 44104820132.40609
[2025-11-27 03:56:25] 2025-11-27 07:55:31,415 | INFO     | sum of deviations: 300041340174.25323
[2025-11-27 03:56:25] 2025-11-27 07:55:31,416 | INFO     | mean x: 1764214199.5134099
[2025-11-27 03:56:25] 2025-11-27 07:55:31,416 | INFO     | mean y: 2852092.6781609193
[2025-11-27 03:56:25] 2025-11-27 07:55:31,416 | INFO     | intersect: -11998947057.331738
[2025-11-27 03:56:25] 2025-11-27 07:55:31,416 | INFO     | chi2: 10.745959891265567
[2025-11-27 03:56:25] 2025-11-27 07:55:31,417 | INFO     | sum of square deviations: 42849692819.721405
[2025-11-27 03:56:25] 2025-11-27 07:55:31,421 | INFO     | sum of deviations: 476857294436.9478
[2025-11-27 03:56:25] 2025-11-27 07:55:31,421 | INFO     | mean x: 1764214047.0232108
[2025-11-27 03:56:25] 2025-11-27 07:55:31,421 | INFO     | mean y: 2873560.754352031
[2025-11-27 03:56:25] 2025-11-27 07:55:31,422 | INFO     | intersect: -19630367237.74097
[2025-11-27 03:56:25] 2025-11-27 07:55:31,422 | INFO     | chi2: 7.3066668821144445
[2025-11-27 03:56:25] 2025-11-27 07:55:31,422 | INFO     | current chi2=7.3066668821144445 (change=32.00545176002953 %)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,423 | INFO     | sum of square deviations: 41618612469.435425
[2025-11-27 03:56:25] 2025-11-27 07:55:31,427 | INFO     | sum of deviations: 663085374438.7064
[2025-11-27 03:56:25] 2025-11-27 07:55:31,427 | INFO     | mean x: 1764213894.5332031
[2025-11-27 03:56:25] 2025-11-27 07:55:31,428 | INFO     | mean y: 2896637.458984375
[2025-11-27 03:56:25] 2025-11-27 07:55:31,428 | INFO     | intersect: -28105306914.63283
[2025-11-27 03:56:25] 2025-11-27 07:55:31,428 | INFO     | chi2: 3.7197062055038583
[2025-11-27 03:56:25] 2025-11-27 07:55:31,428 | INFO     | current chi2=3.7197062055038583 (change=49.091613652059245 %)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,429 | INFO     | sum of square deviations: 40411284423.211174
[2025-11-27 03:56:25] 2025-11-27 07:55:31,433 | INFO     | sum of deviations: 696907786932.4333
[2025-11-27 03:56:25] 2025-11-27 07:55:31,433 | INFO     | mean x: 1764213742.0394478
[2025-11-27 03:56:25] 2025-11-27 07:55:31,433 | INFO     | mean y: 2900886.9783037477
[2025-11-27 03:56:25] 2025-11-27 07:55:31,433 | INFO     | intersect: -30421628107.559406
[2025-11-27 03:56:25] 2025-11-27 07:55:31,434 | INFO     | chi2: 3.4027352367711887
[2025-11-27 03:56:25] 2025-11-27 07:55:31,434 | INFO     | current chi2=3.4027352367711887 (change=8.52139796050731 %)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,434 | INFO     | right removable region: 506
[2025-11-27 03:56:25] 2025-11-27 07:55:31,434 | INFO     | sum of square deviations: 42849370129.72139
[2025-11-27 03:56:25] 2025-11-27 07:55:31,439 | INFO     | sum of deviations: 123008279929.26115
[2025-11-27 03:56:25] 2025-11-27 07:55:31,439 | INFO     | mean x: 1764214352.0232108
[2025-11-27 03:56:25] 2025-11-27 07:55:31,439 | INFO     | mean y: 2873575.2282398455
[2025-11-27 03:56:25] 2025-11-27 07:55:31,439 | INFO     | intersect: -5061680984.428299
[2025-11-27 03:56:25] 2025-11-27 07:55:31,440 | INFO     | chi2: 7.696728908994128
[2025-11-27 03:56:25] 2025-11-27 07:55:31,440 | INFO     | current chi2=7.696728908994128 (change=28.37560360475463 %)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,440 | INFO     | sum of square deviations: 41618124779.71875
[2025-11-27 03:56:25] 2025-11-27 07:55:31,445 | INFO     | sum of deviations: 85966323381.65625
[2025-11-27 03:56:25] 2025-11-27 07:55:31,445 | INFO     | mean x: 1764214504.5234375
[2025-11-27 03:56:25] 2025-11-27 07:55:31,445 | INFO     | mean y: 2878161.9453125
[2025-11-27 03:56:25] 2025-11-27 07:55:31,446 | INFO     | intersect: -3641280132.3846226
[2025-11-27 03:56:25] 2025-11-27 07:55:31,446 | INFO     | chi2: 7.616314314259204
[2025-11-27 03:56:25] 2025-11-27 07:55:31,446 | INFO     | current chi2=7.616314314259204 (change=1.0447892304087123 %)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,446 | INFO     | left removable region: 20
[2025-11-27 03:56:25] 2025-11-27 07:55:31,447 | INFO     | sum of square deviations: 35594712492.213844
[2025-11-27 03:56:25] 2025-11-27 07:55:31,451 | INFO     | sum of deviations: 421155247310.95044
[2025-11-27 03:56:25] 2025-11-27 07:55:31,451 | INFO     | mean x: 1764214321.5514402
[2025-11-27 03:56:25] 2025-11-27 07:55:31,451 | INFO     | mean y: 2936409.641975309
[2025-11-27 03:56:25] 2025-11-27 07:55:31,451 | INFO     | intersect: -20871178504.61802
[2025-11-27 03:56:25] 2025-11-27 07:55:31,452 | INFO     | chi2: 0.10848512485967099
[2025-11-27 03:56:25] 2025-11-27 07:55:31,452 | INFO     | current memory leak: 11.83 B/s (using 486 data points, chi2=0.11)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,452 | INFO     | could have reported an average CPU frequency of 3143 MHz (21 samples)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | ..............................
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . Timing measurements:
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . get job = 0 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . initial setup = 3 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . payload setup = 12 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . stage-in = 0 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . payload execution = 31816 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . stage-out = 3 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | . log creation = 1 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,453 | INFO     | ..............................
[2025-11-27 03:56:25] 2025-11-27 07:55:31,555 | INFO     | 
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | job summary report
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | --------------------------------------------------
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | PanDA job id: 6897372782
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | task id: 47556161
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | errors: (none)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | pilot state: finished 
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | transexitcode: 0
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | exeerrorcode: 0
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | exeerrordiag: 
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | exitcode: 0
[2025-11-27 03:56:25] 2025-11-27 07:55:31,556 | INFO     | exitmsg: OK
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | cpuconsumptiontime: 198220 s
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | nevents: 1000
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | neventsw: 0
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | pid: 3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | pgrp: 3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | corecount: 8
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | event service: False
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | sizes: {0: 2284032, 1: 2284287, 9: 2284549, 12: 2284577, 31833: 2324345, 31837: 2333339, 31838: 2333523, 31846: 2333769}
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | --------------------------------------------------
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | 
[2025-11-27 03:56:25] 2025-11-27 07:55:31,557 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 03:56:25] 2025-11-27 07:55:31,600 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | job 6897372782 has completed (purged errors)
[2025-11-27 03:56:25] 2025-11-27 07:55:31,602 | INFO     | overall cleanup function is called
[2025-11-27 03:56:25] 2025-11-27 07:55:32,622 | INFO     | --- collectZombieJob: --- 10, [3134675]
[2025-11-27 03:56:25] 2025-11-27 07:55:32,622 | INFO     | zombie collector waiting for pid 3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:32,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:56:25] 2025-11-27 07:55:32,622 | INFO     | collected zombie processes
[2025-11-27 03:56:25] 2025-11-27 07:55:32,622 | INFO     | will attempt to kill all subprocesses of pid=3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:33,343 | INFO     | process IDs to be killed: [3134675] (in reverse order)
[2025-11-27 03:56:25] 2025-11-27 07:55:33,580 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:56:25] 2025-11-27 07:55:33,580 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:56:25] 2025-11-27 07:55:33,624 | INFO     | did not find any defunct processes belonging to 3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:33,653 | INFO     | did not find any defunct processes belonging to 3134675
[2025-11-27 03:56:25] 2025-11-27 07:55:33,657 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:56:25] 2025-11-27 07:55:33,657 | INFO     | ready for new job
[2025-11-27 03:56:25] 2025-11-27 07:55:33,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:56:25] 2025-11-27 07:55:33,663 | INFO     | ***************************************
[2025-11-27 03:56:25] 2025-11-27 07:55:33,663 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:56:25] 2025-11-27 07:55:33,663 | INFO     | ***************************************
[2025-11-27 03:56:25] 2025-11-27 07:55:33,663 | INFO     | 
[2025-11-27 03:56:25] 2025-11-27 07:55:33,669 | INFO     | architecture information:
[2025-11-27 03:56:25] 2025-11-27 07:55:33,669 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:56:25] 2025-11-27 07:55:33,686 | INFO     | cat /etc/os-release:
[2025-11-27 03:56:25] NAME="CentOS Linux"
[2025-11-27 03:56:25] VERSION="7 (Core)"
[2025-11-27 03:56:25] ID="centos"
[2025-11-27 03:56:25] ID_LIKE="rhel fedora"
[2025-11-27 03:56:25] VERSION_ID="7"
[2025-11-27 03:56:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:56:25] ANSI_COLOR="0;31"
[2025-11-27 03:56:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:56:25] HOME_URL="https://www.centos.org/"
[2025-11-27 03:56:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:56:25] 
[2025-11-27 03:56:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:56:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:56:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:56:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:56:25] 
[2025-11-27 03:56:25] 2025-11-27 07:55:33,687 | INFO     | ***************************************
[2025-11-27 03:56:25] 2025-11-27 07:55:34,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 03:56:25] 2025-11-27 07:55:34,222 | INFO     | sufficient remaining disk space (61769515008 B)
[2025-11-27 03:56:25] 2025-11-27 07:55:34,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:56:25] 2025-11-27 07:55:34,223 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:56:25] 2025-11-27 07:55:34,223 | INFO     | update_server=False
[2025-11-27 03:56:25] 2025-11-27 07:55:34,223 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:56:25] 2025-11-27 07:55:34,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:25] 2025-11-27 07:55:34,224 | INFO     | aborting loop
[2025-11-27 03:56:25] 2025-11-27 07:55:34,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:56:25] 2025-11-27 07:55:35,166 | INFO     | all data control threads have been joined
[2025-11-27 03:56:25] 2025-11-27 07:55:35,226 | INFO     | all job control threads have been joined
[2025-11-27 03:56:25] 2025-11-27 07:55:35,229 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:35,233 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:35,346 | INFO     | all payload control threads have been joined
[2025-11-27 03:56:25] 2025-11-27 07:55:35,518 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:35,603 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:35,698 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,102 | INFO     | [job] validate thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,171 | INFO     | [data] control thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,231 | INFO     | [job] control thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,351 | INFO     | [payload] control thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,391 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,479 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:56:25] 2025-11-27 07:55:36,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,763 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:36,913 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:37,540 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:55:37,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:56:25] 2025-11-27 07:55:41,634 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:56:25] 2025-11-27 07:56:04,648 | INFO     | PID=3127875 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 03:56:25] 2025-11-27 07:56:04,649 | INFO     | .. there are 78 such processes running
[2025-11-27 03:56:25] 2025-11-27 07:56:04,650 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:56:25] 2025-11-27 07:56:04,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:56:25] 2025-11-27 07:56:04,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:56:25] 2025-11-27 07:56:20,122 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:56:25] 2025-11-27 07:56:21,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473267201856)>', '<ExcThread(monitor, started 140472894854912)>']
[2025-11-27 03:56:25] 2025-11-27 07:56:22,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:56:25] 2025-11-27 07:56:22,764 | INFO     | [monitor] control thread has ended
[2025-11-27 03:56:25] 2025-11-27 07:56:26,996 | INFO     | all workflow threads have been joined
[2025-11-27 03:56:25] 2025-11-27 07:56:26,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:56:25] 2025-11-27 07:56:26,998 | INFO     | traces error code: 0
[2025-11-27 03:56:25] 2025-11-27 07:56:26,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:56:25] 2025-11-27 07:56:27,219 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:56:25] 2025-11-27 07:56:27,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:56:25] 2025-11-27 07:56:27,223 [wrapper] pilotpid: 3127875
[2025-11-27 03:56:25] 2025-11-27 07:56:27,225 [wrapper] Pilot exit status: 0
[2025-11-27 03:56:25] 2025-11-27 07:56:27,234 [wrapper] pandaids: 6897372782
[2025-11-27 03:56:25] 2025-11-27 07:56:27,391 [wrapper] cleanup supervisor_pilot 2095800 3127876
[2025-11-27 03:56:25] 2025-11-27 07:56:27,394 [wrapper] Test setup, not cleaning
[2025-11-27 03:56:25] 2025-11-27 07:56:27,396 [wrapper] apfmon messages muted
[2025-11-27 03:56:25] 2025-11-27 07:56:27,398 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:56:25] 2025-11-27 07:56:27,400 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:56:25]  *** Error codes and diagnostics ***
[2025-11-27 03:56:25]     "exeErrorCode": 0,
[2025-11-27 03:56:25]     "exeErrorDiag": "",
[2025-11-27 03:56:25]     "pilotErrorCode": 0,
[2025-11-27 03:56:25]     "pilotErrorDiag": "",
[2025-11-27 03:56:25]  *** Listing of results directory ***
[2025-11-27 03:56:25] total 1310388
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 03:56:25] -rwx------. 1 boincer umatlas     36292 Nov 25 11:55 runpilot2-wrapper.sh
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:56:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:04 run_atlas
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:04 job.xml
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas 411245531 Nov 26 18:04 EVNT.47483658._002207.pool.root.1
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:04 start_atlas.sh
[2025-11-27 03:56:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:04 shared
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 18:04 input.tar.gz
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:04 boinc_lockfile
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 18:04 pandaJob.out
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      2076 Nov 26 18:04 stderr.txt
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas        57 Nov 26 18:04 setup.sh.local
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas    991546 Nov 26 18:04 agis_schedconf.cvmfs.json
[2025-11-27 03:56:25] drwx------. 5 boincer umatlas      4096 Nov 26 18:04 pilot3
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:41 boinc_task_state.xml
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas 914826241 Nov 27 02:53 HITS.47556161._001901.pool.root.1
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas      1072 Nov 27 02:55 memory_monitor_summary.json
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas   1791036 Nov 27 02:55 log.47556161._001901.job.log.tgz.1
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas      8628 Nov 27 02:55 heartbeat.json
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas        95 Nov 27 02:56 pilot_heartbeat.json
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas      4825 Nov 27 02:56 pilotlog.txt
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas   4138861 Nov 27 02:56 log.47556161._001901.job.log.1
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas       353 Nov 27 02:56 output.list
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:56 runtime_log
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas   5949440 Nov 27 02:56 result.tar.gz
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 02:56 runtime_log.err
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas       664 Nov 27 02:56 1gGNDmDVBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm1TJKDmzpjoQm.diag
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:56 wrapper_checkpoint.txt
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 03:56 init_data.xml
[2025-11-27 03:56:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:56 boinc_mmap_file
[2025-11-27 03:56:25] HITS file was successfully produced:
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas 914826241 Nov 27 02:53 shared/HITS.pool.root.1
[2025-11-27 03:56:25]  *** Contents of shared directory: ***
[2025-11-27 03:56:25] total 1301412
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas 411245531 Nov 26 18:04 ATLAS.root_0
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:04 start_atlas.sh
[2025-11-27 03:56:25] -rw-r--r--. 2 boincer umatlas    590110 Nov 26 18:04 input.tar.gz
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas 914826241 Nov 27 02:53 HITS.pool.root.1
[2025-11-27 03:56:25] -rw-------. 1 boincer umatlas   5949440 Nov 27 02:56 result.tar.gz
03:56:27 (3123482): run_atlas exited; CPU time 199423.430367
03:56:27 (3123482): called boinc_finish(0)

</stderr_txt>
]]>

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