Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:23 (3398711): wrapper (7.7.26015): starting
17:46:23 (3398711): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 17:46:23] Arguments: --nthreads 9
[2025-11-26 17:46:23] Threads: 9
[2025-11-26 17:46:23] Checking for CVMFS
[2025-11-26 17:46:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:46:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:46:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:46:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:46:23] 2.13.3.0 3025293 9570 105032 153337 1 90 18679727 37030912 1932 16776704 0 10526060 99.943 804016 18107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 17:46:23] CVMFS is ok
[2025-11-26 17:46:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:46:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:46:23] Further information can be found at the LHC@home message board.
[2025-11-26 17:46:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:46:23] Checking for apptainer binary...
[2025-11-26 17:46:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:46:23] Running /usr/bin/apptainer --version
[2025-11-26 17:46:23] apptainer version 1.4.4-1.el9
[2025-11-26 17:46:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:46:23] c-205-37.aglt2.org
[2025-11-26 17:46:23] apptainer works
[2025-11-26 17:46:23] Set ATHENA_PROC_NUMBER=9
[2025-11-26 17:46:23] Set ATHENA_CORE_NUMBER=9
[2025-11-26 17:46:23] Starting ATLAS job with PandaID=6896713722
[2025-11-26 17:46:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:37:29]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:37:29] 2025-11-27 07:36:44,151 | INFO     | monitor loop #2362: job 0:6896713722 is in state 'finished'
[2025-11-27 02:37:29] 2025-11-27 07:36:44,151 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:37:29] 2025-11-27 07:36:45,631 | INFO     | time since job start (31812s) is within the limit (172800.0s)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,382 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:37:29] 2025-11-27 07:36:46,387 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2637.7205312499996
[2025-11-27 02:37:29] 2025-11-27 07:36:46,394 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6896713722/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,394 | INFO     | extracted standard info from prmon json
[2025-11-27 02:37:29] 2025-11-27 07:36:46,395 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:37:29] 2025-11-27 07:36:46,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:37:29] 2025-11-27 07:36:46,400 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:37:29] 2025-11-27 07:36:46,401 | INFO     | sum of square deviations: 43851839225.5083
[2025-11-27 02:37:29] 2025-11-27 07:36:46,405 | INFO     | sum of deviations: 717790246339.3074
[2025-11-27 02:37:29] 2025-11-27 07:36:46,405 | INFO     | mean x: 1764213077.0307102
[2025-11-27 02:37:29] 2025-11-27 07:36:46,405 | INFO     | mean y: 3099280.980806142
[2025-11-27 02:37:29] 2025-11-27 07:36:46,405 | INFO     | intersect: -28874479436.86424
[2025-11-27 02:37:29] 2025-11-27 07:36:46,406 | INFO     | chi2: 4.452013540486586
[2025-11-27 02:37:29] 2025-11-27 07:36:46,406 | INFO     | sum of square deviations: 42601383450.504486
[2025-11-27 02:37:29] 2025-11-27 07:36:46,410 | INFO     | sum of deviations: 865778730370.6285
[2025-11-27 02:37:29] 2025-11-27 07:36:46,410 | INFO     | mean x: 1764212924.5310078
[2025-11-27 02:37:29] 2025-11-27 07:36:46,410 | INFO     | mean y: 3117299.523255814
[2025-11-27 02:37:29] 2025-11-27 07:36:46,410 | INFO     | intersect: -35850601575.08813
[2025-11-27 02:37:29] 2025-11-27 07:36:46,411 | INFO     | chi2: 2.1712005570596618
[2025-11-27 02:37:29] 2025-11-27 07:36:46,411 | INFO     | current chi2=2.1712005570596618 (change=51.23104327256025 %)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,411 | INFO     | sum of square deviations: 41374928125.49913
[2025-11-27 02:37:29] 2025-11-27 07:36:46,415 | INFO     | sum of deviations: 870727265632.5771
[2025-11-27 02:37:29] 2025-11-27 07:36:46,415 | INFO     | mean x: 1764212772.0313113
[2025-11-27 02:37:29] 2025-11-27 07:36:46,415 | INFO     | mean y: 3117898.5264187865
[2025-11-27 02:37:29] 2025-11-27 07:36:46,415 | INFO     | intersect: -37124394645.433105
[2025-11-27 02:37:29] 2025-11-27 07:36:46,416 | INFO     | chi2: 2.0628412418871562
[2025-11-27 02:37:29] 2025-11-27 07:36:46,416 | INFO     | current chi2=2.0628412418871562 (change=4.990755682158198 %)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,416 | INFO     | right removable region: 510
[2025-11-27 02:37:29] 2025-11-27 07:36:46,416 | INFO     | sum of square deviations: 42601405348.5639
[2025-11-27 02:37:29] 2025-11-27 07:36:46,420 | INFO     | sum of deviations: 579340554348.7965
[2025-11-27 02:37:29] 2025-11-27 07:36:46,420 | INFO     | mean x: 1764213229.5290697
[2025-11-27 02:37:29] 2025-11-27 07:36:46,420 | INFO     | mean y: 3116117.180232558
[2025-11-27 02:37:29] 2025-11-27 07:36:46,420 | INFO     | intersect: -23988587020.83153
[2025-11-27 02:37:29] 2025-11-27 07:36:46,421 | INFO     | chi2: 2.539425056727638
[2025-11-27 02:37:29] 2025-11-27 07:36:46,421 | INFO     | current chi2=2.539425056727638 (change=42.96007786961739 %)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,421 | INFO     | sum of square deviations: 41374940568.559906
[2025-11-27 02:37:29] 2025-11-27 07:36:46,425 | INFO     | sum of deviations: 538959498067.2122
[2025-11-27 02:37:29] 2025-11-27 07:36:46,425 | INFO     | mean x: 1764213382.029354
[2025-11-27 02:37:29] 2025-11-27 07:36:46,425 | INFO     | mean y: 3121134.252446184
[2025-11-27 02:37:29] 2025-11-27 07:36:46,425 | INFO     | intersect: -22977928404.330482
[2025-11-27 02:37:29] 2025-11-27 07:36:46,426 | INFO     | chi2: 2.491169093773648
[2025-11-27 02:37:29] 2025-11-27 07:36:46,426 | INFO     | current chi2=2.491169093773648 (change=1.9002711982441327 %)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,426 | INFO     | left removable region: 20
[2025-11-27 02:37:29] 2025-11-27 07:36:46,426 | INFO     | sum of square deviations: 36480675504.100006
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | sum of deviations: 635214076510.3716
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | mean x: 1764213351.5285714
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | mean y: 3147466.044897959
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | intersect: -30715942555.534893
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | chi2: 0.07467691813066095
[2025-11-27 02:37:29] 2025-11-27 07:36:46,430 | INFO     | current memory leak: 17.41 B/s (using 490 data points, chi2=0.07)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | could have reported an average CPU frequency of 2612 MHz (21 samples)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | ..............................
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . Timing measurements:
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . get job = 0 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . initial setup = 2 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . payload setup = 5 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . stage-in = 0 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . payload execution = 31778 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . stage-out = 3 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | . log creation = 0 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,431 | INFO     | ..............................
[2025-11-27 02:37:29] 2025-11-27 07:36:46,485 | INFO     | 
[2025-11-27 02:37:29] 2025-11-27 07:36:46,485 | INFO     | job summary report
[2025-11-27 02:37:29] 2025-11-27 07:36:46,485 | INFO     | --------------------------------------------------
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | PanDA job id: 6896713722
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | task id: 47556173
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | errors: (none)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | pilot state: finished 
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | transexitcode: 0
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | exeerrorcode: 0
[2025-11-27 02:37:29] 2025-11-27 07:36:46,486 | INFO     | exeerrordiag: 
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | exitcode: 0
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | exitmsg: OK
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | cpuconsumptiontime: 281092 s
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | nevents: 1000
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | neventsw: 0
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | pid: 3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | pgrp: 3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | corecount: 9
[2025-11-27 02:37:29] 2025-11-27 07:36:46,487 | INFO     | event service: False
[2025-11-27 02:37:29] 2025-11-27 07:36:46,488 | INFO     | sizes: {0: 2284313, 1: 2284313, 4: 2284603, 11: 2284631, 31788: 2324132, 31793: 2333126, 31795: 2333310, 31798: 2333556}
[2025-11-27 02:37:29] 2025-11-27 07:36:46,488 | INFO     | --------------------------------------------------
[2025-11-27 02:37:29] 2025-11-27 07:36:46,488 | INFO     | 
[2025-11-27 02:37:29] 2025-11-27 07:36:46,488 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 02:37:29] 2025-11-27 07:36:46,504 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,505 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | job 6896713722 has completed (purged errors)
[2025-11-27 02:37:29] 2025-11-27 07:36:46,507 | INFO     | overall cleanup function is called
[2025-11-27 02:37:29] 2025-11-27 07:36:47,524 | INFO     | --- collectZombieJob: --- 10, [3408781]
[2025-11-27 02:37:29] 2025-11-27 07:36:47,524 | INFO     | zombie collector waiting for pid 3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:47,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:37:29] 2025-11-27 07:36:47,525 | INFO     | collected zombie processes
[2025-11-27 02:37:29] 2025-11-27 07:36:47,525 | INFO     | will attempt to kill all subprocesses of pid=3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:47,726 | INFO     | process IDs to be killed: [3408781] (in reverse order)
[2025-11-27 02:37:29] 2025-11-27 07:36:47,782 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:37:29] 2025-11-27 07:36:47,782 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:37:29] 2025-11-27 07:36:47,788 | INFO     | did not find any defunct processes belonging to 3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:47,793 | INFO     | did not find any defunct processes belonging to 3408781
[2025-11-27 02:37:29] 2025-11-27 07:36:47,794 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:37:29] 2025-11-27 07:36:47,794 | INFO     | ready for new job
[2025-11-27 02:37:29] 2025-11-27 07:36:47,794 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:37:29] 2025-11-27 07:36:47,797 | INFO     | ***************************************
[2025-11-27 02:37:29] 2025-11-27 07:36:47,798 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:37:29] 2025-11-27 07:36:47,798 | INFO     | ***************************************
[2025-11-27 02:37:29] 2025-11-27 07:36:47,798 | INFO     | 
[2025-11-27 02:37:29] 2025-11-27 07:36:47,800 | INFO     | architecture information:
[2025-11-27 02:37:29] 2025-11-27 07:36:47,800 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:37:29] 2025-11-27 07:36:47,812 | INFO     | cat /etc/os-release:
[2025-11-27 02:37:29] NAME="CentOS Linux"
[2025-11-27 02:37:29] VERSION="7 (Core)"
[2025-11-27 02:37:29] ID="centos"
[2025-11-27 02:37:29] ID_LIKE="rhel fedora"
[2025-11-27 02:37:29] VERSION_ID="7"
[2025-11-27 02:37:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:37:29] ANSI_COLOR="0;31"
[2025-11-27 02:37:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:37:29] HOME_URL="https://www.centos.org/"
[2025-11-27 02:37:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:37:29] 
[2025-11-27 02:37:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:37:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:37:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:37:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:37:29] 
[2025-11-27 02:37:29] 2025-11-27 07:36:47,812 | INFO     | ***************************************
[2025-11-27 02:37:29] 2025-11-27 07:36:48,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 02:37:29] 2025-11-27 07:36:48,328 | INFO     | sufficient remaining disk space (38852886528 B)
[2025-11-27 02:37:29] 2025-11-27 07:36:48,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:37:29] 2025-11-27 07:36:48,329 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:37:29] 2025-11-27 07:36:48,329 | INFO     | update_server=False
[2025-11-27 02:37:29] 2025-11-27 07:36:48,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:37:29] 2025-11-27 07:36:48,329 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:37:29] 2025-11-27 07:36:48,330 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:37:29] 2025-11-27 07:36:48,330 | INFO     | aborting loop
[2025-11-27 02:37:29] 2025-11-27 07:36:48,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:37:29] 2025-11-27 07:36:48,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:37:29] 2025-11-27 07:36:49,334 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:49,335 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:49,335 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:49,361 | INFO     | all job control threads have been joined
[2025-11-27 02:37:29] 2025-11-27 07:36:49,397 | INFO     | all data control threads have been joined
[2025-11-27 02:37:29] 2025-11-27 07:36:49,607 | INFO     | all payload control threads have been joined
[2025-11-27 02:37:29] 2025-11-27 07:36:49,879 | INFO     | [job] validate thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:49,955 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,233 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,367 | INFO     | [job] control thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,383 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,402 | INFO     | [data] control thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,426 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,490 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,515 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,547 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,613 | INFO     | [payload] control thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:50,882 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:36:52,980 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:37:29] 2025-11-27 07:37:18,954 | INFO     | PID=3402406 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:37:29] 2025-11-27 07:37:18,955 | INFO     | .. there are 3 such processes running
[2025-11-27 02:37:29] 2025-11-27 07:37:18,956 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:37:29] 2025-11-27 07:37:18,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:37:29] 2025-11-27 07:37:18,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:37:29] 2025-11-27 07:37:23,420 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:37:29] 2025-11-27 07:37:23,894 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652197148480)>', '<ExcThread(monitor, started 140651706439424)>']
[2025-11-27 02:37:29] 2025-11-27 07:37:23,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:37:29] 2025-11-27 07:37:23,981 | INFO     | [monitor] control thread has ended
[2025-11-27 02:37:29] 2025-11-27 07:37:28,919 | INFO     | all workflow threads have been joined
[2025-11-27 02:37:29] 2025-11-27 07:37:28,920 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:37:29] 2025-11-27 07:37:28,920 | INFO     | traces error code: 0
[2025-11-27 02:37:29] 2025-11-27 07:37:28,920 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:37:29] 2025-11-27 07:37:29,035 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:37:29] 2025-11-27 07:37:29,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:37:29] 2025-11-27 07:37:29,040 [wrapper] pilotpid: 3402406
[2025-11-27 02:37:29] 2025-11-27 07:37:29,042 [wrapper] Pilot exit status: 0
[2025-11-27 02:37:29] 2025-11-27 07:37:29,051 [wrapper] pandaids: 6896713722
[2025-11-27 02:37:29] 2025-11-27 07:37:29,090 [wrapper] cleanup supervisor_pilot 3876375 3402407
[2025-11-27 02:37:29] 2025-11-27 07:37:29,093 [wrapper] Test setup, not cleaning
[2025-11-27 02:37:29] 2025-11-27 07:37:29,095 [wrapper] apfmon messages muted
[2025-11-27 02:37:29] 2025-11-27 07:37:29,097 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:37:29] 2025-11-27 07:37:29,100 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:37:29]  *** Error codes and diagnostics ***
[2025-11-27 02:37:29]     "exeErrorCode": 0,
[2025-11-27 02:37:29]     "exeErrorDiag": "",
[2025-11-27 02:37:29]     "pilotErrorCode": 0,
[2025-11-27 02:37:29]     "pilotErrorDiag": "",
[2025-11-27 02:37:29]  *** Listing of results directory ***
[2025-11-27 02:37:29] total 1316796
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 02:37:29] -rwx------. 1 boincer umatlas     36292 Nov 25 00:41 runpilot2-wrapper.sh
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:41 queuedata.json
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:37:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:46 run_atlas
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:46 job.xml
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas 408050372 Nov 26 17:46 EVNT.47483658._003068.pool.root.1
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 17:46 input.tar.gz
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:46 start_atlas.sh
[2025-11-27 02:37:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:46 shared
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:46 boinc_lockfile
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 17:46 pandaJob.out
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas    991546 Nov 26 17:46 agis_schedconf.cvmfs.json
[2025-11-27 02:37:29] drwx------. 5 boincer umatlas      4096 Nov 26 17:46 pilot3
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas      6532 Nov 27 02:28 init_data.xml
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:28 boinc_task_state.xml
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas 923504004 Nov 27 02:36 HITS.47556173._000506.pool.root.1
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas      1045 Nov 27 02:36 memory_monitor_summary.json
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas   1931089 Nov 27 02:36 log.47556173._000506.job.log.tgz.1
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas      8617 Nov 27 02:36 heartbeat.json
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas        95 Nov 27 02:37 pilot_heartbeat.json
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:37 wrapper_checkpoint.txt
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:37 boinc_mmap_file
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas      4823 Nov 27 02:37 pilotlog.txt
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas   4532785 Nov 27 02:37 log.47556173._000506.job.log.1
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas       353 Nov 27 02:37 output.list
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:37 runtime_log
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas   6481920 Nov 27 02:37 result.tar.gz
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas      8818 Nov 27 02:37 runtime_log.err
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas       659 Nov 27 02:37 7FqLDmmy0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0MJKDmC44XFn.diag
[2025-11-27 02:37:29] -rw-r--r--. 1 boincer umatlas     21332 Nov 27 02:37 stderr.txt
[2025-11-27 02:37:29] HITS file was successfully produced:
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas 923504004 Nov 27 02:36 shared/HITS.pool.root.1
[2025-11-27 02:37:29]  *** Contents of shared directory: ***
[2025-11-27 02:37:29] total 1307284
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas 408050372 Nov 26 17:46 ATLAS.root_0
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 17:46 input.tar.gz
[2025-11-27 02:37:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:46 start_atlas.sh
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas 923504004 Nov 27 02:36 HITS.pool.root.1
[2025-11-27 02:37:29] -rw-------. 1 boincer umatlas   6481920 Nov 27 02:37 result.tar.gz
02:37:30 (3398711): run_atlas exited; CPU time 281384.453539
02:37:30 (3398711): called boinc_finish(0)

</stderr_txt>
]]>

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