Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:58:33 (3981756): wrapper (7.7.26015): starting
17:58:33 (3981756): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:58:33] Arguments: --nthreads 8
[2025-11-26 17:58:33] Threads: 8
[2025-11-26 17:58:33] Checking for CVMFS
[2025-11-26 17:58:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:58:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:58:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:58:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:58:34] 2.13.3.0 11502 30634 356344 153337 2 1119 21870587 32935937 61050 16776704 0 298950277 99.632 280940373 36638 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:58:34] CVMFS is ok
[2025-11-26 17:58:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:58:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:58:34] Further information can be found at the LHC@home message board.
[2025-11-26 17:58:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:58:34] Checking for apptainer binary...
[2025-11-26 17:58:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:58:34] Running /usr/bin/apptainer --version
[2025-11-26 17:58:34] apptainer version 1.4.4-1.el9
[2025-11-26 17:58:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:58:34] c7-2-15.aglt2.org
[2025-11-26 17:58:34] apptainer works
[2025-11-26 17:58:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:58:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:58:34] Starting ATLAS job with PandaID=6895617928
[2025-11-26 17:58:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:12:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:12:14] 2025-11-27 08:11:34,002 | INFO     | log transfer has been attempted: DONE
[2025-11-27 03:12:14] 2025-11-27 08:11:34,005 | INFO     | job 6895617928 has finished - writing final server update
[2025-11-27 03:12:14] 2025-11-27 08:11:34,006 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 03:12:14] 2025-11-27 08:11:34,007 | INFO     | executing command: lscpu
[2025-11-27 03:12:14] 2025-11-27 08:11:34,070 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 03:12:14] 2025-11-27 08:11:35,133 | INFO     | time since job start (33162s) is within the limit (172800.0s)
[2025-11-27 03:12:14] 2025-11-27 08:11:36,285 | INFO     | monitor loop #1809: job 0:6895617928 is in state 'finished'
[2025-11-27 03:12:14] 2025-11-27 08:11:36,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:12:14] 2025-11-27 08:11:37,196 | INFO     | PID=3985807 has CPU usage=20.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 03:12:14] 2025-11-27 08:11:37,196 | INFO     | .. there are 88 such processes running
[2025-11-27 03:12:14] 2025-11-27 08:11:38,212 | INFO     | time since job start (33165s) is within the limit (172800.0s)
[2025-11-27 03:12:14] 2025-11-27 08:11:38,794 | INFO     | monitor loop #1810: job 0:6895617928 is in state 'finished'
[2025-11-27 03:12:14] 2025-11-27 08:11:38,795 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,219 | INFO     | time since job start (33167s) is within the limit (172800.0s)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,420 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:12:14] 2025-11-27 08:11:40,426 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3291.42578125
[2025-11-27 03:12:14] 2025-11-27 08:11:40,443 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895617928/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,443 | INFO     | extracted standard info from prmon json
[2025-11-27 03:12:14] 2025-11-27 08:11:40,443 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:12:14] 2025-11-27 08:11:40,443 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:12:14] 2025-11-27 08:11:40,455 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:12:14] 2025-11-27 08:11:40,456 | INFO     | sum of square deviations: 49646896337.727394
[2025-11-27 03:12:14] 2025-11-27 08:11:40,459 | INFO     | sum of deviations: -335441035694.7565
[2025-11-27 03:12:14] 2025-11-27 08:11:40,459 | INFO     | mean x: 1764214513.4935544
[2025-11-27 03:12:14] 2025-11-27 08:11:40,459 | INFO     | mean y: 2754315.640883978
[2025-11-27 03:12:14] 2025-11-27 08:11:40,459 | INFO     | intersect: 11922732949.718943
[2025-11-27 03:12:14] 2025-11-27 08:11:40,460 | INFO     | chi2: 22.352524638551184
[2025-11-27 03:12:14] 2025-11-27 08:11:40,460 | INFO     | sum of square deviations: 48288152598.9979
[2025-11-27 03:12:14] 2025-11-27 08:11:40,463 | INFO     | sum of deviations: -168009299592.27548
[2025-11-27 03:12:14] 2025-11-27 08:11:40,463 | INFO     | mean x: 1764214360.9981413
[2025-11-27 03:12:14] 2025-11-27 08:11:40,463 | INFO     | mean y: 2773107.7249070634
[2025-11-27 03:12:14] 2025-11-27 08:11:40,463 | INFO     | intersect: 6141016199.842759
[2025-11-27 03:12:14] 2025-11-27 08:11:40,464 | INFO     | chi2: 18.94232603706902
[2025-11-27 03:12:14] 2025-11-27 08:11:40,464 | INFO     | current chi2=18.94232603706902 (change=15.256435935655466 %)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,464 | INFO     | right removable region: 537
[2025-11-27 03:12:14] 2025-11-27 08:11:40,464 | INFO     | sum of square deviations: 48288021997.99304
[2025-11-27 03:12:14] 2025-11-27 08:11:40,467 | INFO     | sum of deviations: -458499434345.2193
[2025-11-27 03:12:14] 2025-11-27 08:11:40,467 | INFO     | mean x: 1764214665.9962826
[2025-11-27 03:12:14] 2025-11-27 08:11:40,467 | INFO     | mean y: 2768080.8903345726
[2025-11-27 03:12:14] 2025-11-27 08:11:40,467 | INFO     | intersect: 16754156788.766068
[2025-11-27 03:12:14] 2025-11-27 08:11:40,468 | INFO     | chi2: 20.464299211443482
[2025-11-27 03:12:14] 2025-11-27 08:11:40,468 | INFO     | current chi2=20.464299211443482 (change=8.447481694533503 %)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,468 | INFO     | left removable region: 10
[2025-11-27 03:12:14] 2025-11-27 08:11:40,468 | INFO     | sum of square deviations: 45386410991.73809
[2025-11-27 03:12:14] 2025-11-27 08:11:40,471 | INFO     | sum of deviations: -284889345367.53174
[2025-11-27 03:12:14] 2025-11-27 08:11:40,471 | INFO     | mean x: 1764214635.5047438
[2025-11-27 03:12:14] 2025-11-27 08:11:40,471 | INFO     | mean y: 2794189.2125237193
[2025-11-27 03:12:14] 2025-11-27 08:11:40,471 | INFO     | intersect: 11076724504.792156
[2025-11-27 03:12:14] 2025-11-27 08:11:40,471 | INFO     | chi2: 16.313400994596957
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | current memory leak: -6.28 B/s (using 527 data points, chi2=16.31)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | could have reported an average CPU frequency of 3300 MHz (22 samples)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | ..............................
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | . Timing measurements:
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | . get job = 0 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | . initial setup = 2 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,472 | INFO     | . payload setup = 15 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,473 | INFO     | . stage-in = 0 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,473 | INFO     | . payload execution = 33111 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,473 | INFO     | . stage-out = 4 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,473 | INFO     | . log creation = 0 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,473 | INFO     | ..............................
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | 
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | job summary report
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | --------------------------------------------------
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | PanDA job id: 6895617928
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | task id: 47556161
[2025-11-27 03:12:14] 2025-11-27 08:11:40,942 | INFO     | errors: (none)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | pilot state: finished 
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | transexitcode: 0
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | exeerrorcode: 0
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | exeerrordiag: 
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | exitcode: 0
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | exitmsg: OK
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | cpuconsumptiontime: 185557 s
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | nevents: 1000
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | neventsw: 0
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | pid: 3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | pgrp: 3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | corecount: 8
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | event service: False
[2025-11-27 03:12:14] 2025-11-27 08:11:40,943 | INFO     | sizes: {0: 2284262, 9: 2284524, 11: 2284552, 33131: 2324414, 33136: 2333408, 33138: 2333464, 33145: 2333838}
[2025-11-27 03:12:14] 2025-11-27 08:11:40,944 | INFO     | --------------------------------------------------
[2025-11-27 03:12:14] 2025-11-27 08:11:40,944 | INFO     | 
[2025-11-27 03:12:14] 2025-11-27 08:11:40,944 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,967 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:12:14] 2025-11-27 08:11:40,968 | INFO     | job 6895617928 has completed (purged errors)
[2025-11-27 03:12:14] 2025-11-27 08:11:40,969 | INFO     | overall cleanup function is called
[2025-11-27 03:12:14] 2025-11-27 08:11:41,985 | INFO     | --- collectZombieJob: --- 10, [3994465]
[2025-11-27 03:12:14] 2025-11-27 08:11:41,986 | INFO     | zombie collector waiting for pid 3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:41,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:12:14] 2025-11-27 08:11:41,986 | INFO     | collected zombie processes
[2025-11-27 03:12:14] 2025-11-27 08:11:41,986 | INFO     | will attempt to kill all subprocesses of pid=3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:42,870 | INFO     | process IDs to be killed: [3994465] (in reverse order)
[2025-11-27 03:12:14] 2025-11-27 08:11:43,119 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:12:14] 2025-11-27 08:11:43,120 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:12:14] 2025-11-27 08:11:43,152 | INFO     | did not find any defunct processes belonging to 3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:43,183 | INFO     | did not find any defunct processes belonging to 3994465
[2025-11-27 03:12:14] 2025-11-27 08:11:43,185 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:12:14] 2025-11-27 08:11:43,185 | INFO     | ready for new job
[2025-11-27 03:12:14] 2025-11-27 08:11:43,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:12:14] 2025-11-27 08:11:43,188 | INFO     | ***************************************
[2025-11-27 03:12:14] 2025-11-27 08:11:43,188 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:12:14] 2025-11-27 08:11:43,188 | INFO     | ***************************************
[2025-11-27 03:12:14] 2025-11-27 08:11:43,188 | INFO     | 
[2025-11-27 03:12:14] 2025-11-27 08:11:43,193 | INFO     | architecture information:
[2025-11-27 03:12:14] 2025-11-27 08:11:43,193 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:12:14] 2025-11-27 08:11:43,211 | INFO     | cat /etc/os-release:
[2025-11-27 03:12:14] NAME="CentOS Linux"
[2025-11-27 03:12:14] VERSION="7 (Core)"
[2025-11-27 03:12:14] ID="centos"
[2025-11-27 03:12:14] ID_LIKE="rhel fedora"
[2025-11-27 03:12:14] VERSION_ID="7"
[2025-11-27 03:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:12:14] ANSI_COLOR="0;31"
[2025-11-27 03:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:12:14] HOME_URL="https://www.centos.org/"
[2025-11-27 03:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:12:14] 
[2025-11-27 03:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:12:14] 
[2025-11-27 03:12:14] 2025-11-27 08:11:43,212 | INFO     | ***************************************
[2025-11-27 03:12:14] 2025-11-27 08:11:43,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:12:14] 2025-11-27 08:11:43,740 | INFO     | sufficient remaining disk space (67866984448 B)
[2025-11-27 03:12:14] 2025-11-27 08:11:43,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:12:14] 2025-11-27 08:11:43,741 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:12:14] 2025-11-27 08:11:43,741 | INFO     | update_server=False
[2025-11-27 03:12:14] 2025-11-27 08:11:43,741 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:12:14] 2025-11-27 08:11:43,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:12:14] 2025-11-27 08:11:43,822 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 03:12:14] 2025-11-27 08:11:43,822 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 03:12:14] 2025-11-27 08:11:43,823 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:12:14] 2025-11-27 08:11:43,823 | INFO     | will abort loop
[2025-11-27 03:12:14] 2025-11-27 08:11:43,831 | INFO     | all job control threads have been joined
[2025-11-27 03:12:14] 2025-11-27 08:11:43,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:12:14] 2025-11-27 08:11:44,438 | INFO     | all data control threads have been joined
[2025-11-27 03:12:14] 2025-11-27 08:11:44,600 | INFO     | all payload control threads have been joined
[2025-11-27 03:12:14] 2025-11-27 08:11:44,747 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:44,827 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:44,829 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:44,837 | INFO     | [job] control thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,141 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,168 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,447 | INFO     | [data] control thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,473 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,535 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:12:14] 2025-11-27 08:11:45,608 | INFO     | [payload] control thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,644 | INFO     | [job] validate thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,917 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:45,936 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:46,554 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:47,749 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:52,545 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:12:14] 2025-11-27 08:11:53,835 | INFO     | job.realtimelogging is not enabled
[2025-11-27 03:12:14] 2025-11-27 08:11:54,842 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:12:14] 2025-11-27 08:11:55,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201805612864)>', '<ExcThread(monitor, started 140201456285440)>']
[2025-11-27 03:12:14] 2025-11-27 08:12:00,443 | INFO     | all workflow threads have been joined
[2025-11-27 03:12:14] 2025-11-27 08:12:00,443 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:12:14] 2025-11-27 08:12:00,443 | INFO     | traces error code: 0
[2025-11-27 03:12:14] 2025-11-27 08:12:00,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:12:14] 2025-11-27 08:12:14,164 | INFO     | PID=3985807 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:12:14] 2025-11-27 08:12:14,164 | INFO     | .. there are 89 such processes running
[2025-11-27 03:12:14] 2025-11-27 08:12:14,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:12:14] 2025-11-27 08:12:14,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:12:14] 2025-11-27 08:12:14,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:12:14] 2025-11-27 08:12:14,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:12:14] 2025-11-27 08:12:14,165 | INFO     | [monitor] control thread has ended
[2025-11-27 03:12:14] 2025-11-27 08:12:14,337 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:12:14] 2025-11-27 08:12:14,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:12:14] 2025-11-27 08:12:14,349 [wrapper] pilotpid: 3985807
[2025-11-27 03:12:14] 2025-11-27 08:12:14,356 [wrapper] Pilot exit status: 0
[2025-11-27 03:12:14] 2025-11-27 08:12:14,372 [wrapper] pandaids: 6895617928
[2025-11-27 03:12:14] 2025-11-27 08:12:14,525 [wrapper] cleanup supervisor_pilot  104937 3985808
[2025-11-27 03:12:14] 2025-11-27 08:12:14,529 [wrapper] Test setup, not cleaning
[2025-11-27 03:12:14] 2025-11-27 08:12:14,532 [wrapper] apfmon messages muted
[2025-11-27 03:12:14] 2025-11-27 08:12:14,535 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:12:14] 2025-11-27 08:12:14,537 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:12:14]  *** Error codes and diagnostics ***
[2025-11-27 03:12:14]     "exeErrorCode": 0,
[2025-11-27 03:12:14]     "exeErrorDiag": "",
[2025-11-27 03:12:14]     "pilotErrorCode": 0,
[2025-11-27 03:12:14]     "pilotErrorDiag": "",
[2025-11-27 03:12:14]  *** Listing of results directory ***
[2025-11-27 03:12:14] total 1316584
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 06:12 pilot3.tar.gz
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 06:21 queuedata.json
[2025-11-27 03:12:14] -rwx------. 1 boincer umatlas     36292 Nov 24 06:23 runpilot2-wrapper.sh
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:12:14] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:58 run_atlas
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:58 job.xml
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas 408281019 Nov 26 17:58 EVNT.47483658._002038.pool.root.1
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:58 start_atlas.sh
[2025-11-27 03:12:14] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:58 shared
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 17:58 input.tar.gz
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:58 boinc_lockfile
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 17:58 pandaJob.out
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas        57 Nov 26 17:58 setup.sh.local
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas    991546 Nov 26 17:58 agis_schedconf.cvmfs.json
[2025-11-27 03:12:14] drwx------. 5 boincer umatlas      4096 Nov 26 17:58 pilot3
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:36 boinc_task_state.xml
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas 924456627 Nov 27 03:10 HITS.47556161._000217.pool.root.1
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas      1070 Nov 27 03:11 memory_monitor_summary.json
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas   1785755 Nov 27 03:11 log.47556161._000217.job.log.tgz.1
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas      8628 Nov 27 03:11 heartbeat.json
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 03:11 init_data.xml
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:12 boinc_mmap_file
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas       823 Nov 27 03:12 pilotlog.txt
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas        95 Nov 27 03:12 pilot_heartbeat.json
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:12 wrapper_checkpoint.txt
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas   3975662 Nov 27 03:12 log.47556161._000217.job.log.1
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas       353 Nov 27 03:12 output.list
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:12 runtime_log
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas   5785600 Nov 27 03:12 result.tar.gz
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:12 runtime_log.err
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas       664 Nov 27 03:12 0rxLDmdqjh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAeLKDm49ZoQn.diag
[2025-11-27 03:12:14] -rw-r--r--. 1 boincer umatlas     21775 Nov 27 03:12 stderr.txt
[2025-11-27 03:12:14] HITS file was successfully produced:
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas 924456627 Nov 27 03:10 shared/HITS.pool.root.1
[2025-11-27 03:12:14]  *** Contents of shared directory: ***
[2025-11-27 03:12:14] total 1307760
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas 408281019 Nov 26 17:58 ATLAS.root_0
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:58 start_atlas.sh
[2025-11-27 03:12:14] -rw-r--r--. 2 boincer umatlas    590101 Nov 26 17:58 input.tar.gz
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas 924456627 Nov 27 03:10 HITS.pool.root.1
[2025-11-27 03:12:14] -rw-------. 1 boincer umatlas   5785600 Nov 27 03:12 result.tar.gz
03:12:16 (3981756): run_atlas exited; CPU time 186656.233620
03:12:16 (3981756): called boinc_finish(0)

</stderr_txt>
]]>

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