Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:35:11 (4060469): wrapper (7.7.26015): starting
17:35:11 (4060469): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:35:11] Arguments: --nthreads 8
[2025-11-26 17:35:11] Threads: 8
[2025-11-26 17:35:11] Checking for CVMFS
[2025-11-26 17:35:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:35:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:35:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:35:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:35:13] 2.13.3.0 12357 30610 268408 153337 2 1107 30163524 32503809 76176 16776704 0 479055452 99.634 413957952 46974 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:35:13] CVMFS is ok
[2025-11-26 17:35:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:35:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:35:13] Further information can be found at the LHC@home message board.
[2025-11-26 17:35:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:35:13] Checking for apptainer binary...
[2025-11-26 17:35:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:35:13] Running /usr/bin/apptainer --version
[2025-11-26 17:35:13] apptainer version 1.4.4-1.el9
[2025-11-26 17:35:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:35:13] c8-7-2.aglt2.org
[2025-11-26 17:35:13] apptainer works
[2025-11-26 17:35:13] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:35:13] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:35:13] Starting ATLAS job with PandaID=6893877289
[2025-11-26 17:35:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:59:24]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:59:24] 2025-11-27 04:58:31,473 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:59:24] 2025-11-27 04:58:31,474 | INFO     | sum of square deviations: 16351832013.983932
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | sum of deviations: -90584208060.31192
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | mean x: 1764208002.624
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | mean y: 2787934.5013333336
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | intersect: 9775967149.814472
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | chi2: 12.553666601604263
[2025-11-26 23:59:24] 2025-11-27 04:58:31,480 | INFO     | sum of square deviations: 15706619598.118906
[2025-11-26 23:59:24] 2025-11-27 04:58:31,482 | INFO     | sum of deviations: 39555458193.27585
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | mean x: 1764207850.145946
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | mean y: 2818710.3837837838
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | intersect: -4440151938.0589075
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | chi2: 8.604202654602362
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | current chi2=8.604202654602362 (change=31.460640722266664 %)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,483 | INFO     | sum of square deviations: 15078616806.887678
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | sum of deviations: 174598987508.93402
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | mean x: 1764207697.668493
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | mean y: 2851503.098630137
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | intersect: -20425340400.265057
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | chi2: 4.62832329728488
[2025-11-26 23:59:24] 2025-11-27 04:58:31,485 | INFO     | current chi2=4.62832329728488 (change=46.2085740761905 %)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,486 | INFO     | sum of square deviations: 14467568815.155586
[2025-11-26 23:59:24] 2025-11-27 04:58:31,487 | INFO     | sum of deviations: 268027525477.43344
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | mean x: 1764207545.1888888
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | mean y: 2874745.5083333333
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | intersect: -32680998323.07883
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | chi2: 2.4092297816266313
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | current chi2=2.4092297816266313 (change=47.94594874044428 %)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,488 | INFO     | sum of square deviations: 13873045581.030956
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | sum of deviations: 282824384557.766
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | mean x: 1764207392.6816902
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | mean y: 2878493.8563380283
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | intersect: -35963331460.04915
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | chi2: 2.173704738883255
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | current chi2=2.173704738883255 (change=9.77594767172261 %)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,490 | INFO     | right removable region: 354
[2025-11-26 23:59:24] 2025-11-27 04:58:31,491 | INFO     | sum of square deviations: 15706248108.118889
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | sum of deviations: -177054542564.2649
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | mean x: 1764208155.145946
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | mean y: 2808264.3567567565
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | intersect: 19890503005.155178
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | chi2: 10.575534415556755
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | current chi2=10.575534415556755 (change=15.757405774936847 %)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | left removable region: 10
[2025-11-26 23:59:24] 2025-11-27 04:58:31,493 | INFO     | sum of square deviations: 12622664013.395214
[2025-11-26 23:59:24] 2025-11-27 04:58:31,495 | INFO     | sum of deviations: 179530787845.2559
[2025-11-26 23:59:24] 2025-11-27 04:58:31,495 | INFO     | mean x: 1764207667.2325583
[2025-11-26 23:59:24] 2025-11-27 04:58:31,495 | INFO     | mean y: 2905151.3343023257
[2025-11-26 23:59:24] 2025-11-27 04:58:31,495 | INFO     | intersect: -25089230081.354115
[2025-11-26 23:59:24] 2025-11-27 04:58:31,495 | INFO     | chi2: 0.030469976162880132
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | current memory leak: 14.22 B/s (using 344 data points, chi2=0.03)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | could have reported an average CPU frequency of 3791 MHz (16 samples)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | ..............................
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . Timing measurements:
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . get job = 0 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . initial setup = 2 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . payload setup = 14 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . stage-in = 0 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . payload execution = 22884 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . stage-out = 4 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | . log creation = 1 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,496 | INFO     | ..............................
[2025-11-26 23:59:24] 2025-11-27 04:58:31,965 | INFO     | 
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | job summary report
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | --------------------------------------------------
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | PanDA job id: 6893877289
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | task id: 47523449
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | errors: (none)
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | pilot state: finished 
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | transexitcode: 0
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | exeerrorcode: 0
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | exeerrordiag: 
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | exitcode: 0
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | exitmsg: OK
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | cpuconsumptiontime: 133747 s
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | nevents: 1000
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | neventsw: 0
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | pid: 4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | pgrp: 4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | corecount: 8
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | event service: False
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | sizes: {0: 2284263, 11: 2284553, 21: 2284553, 22902: 2319982, 22907: 2328976, 22909: 2329032, 22943: 2329406}
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | --------------------------------------------------
[2025-11-26 23:59:24] 2025-11-27 04:58:31,966 | INFO     | 
[2025-11-26 23:59:24] 2025-11-27 04:58:31,967 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-26 23:59:24] 2025-11-27 04:58:32,110 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | job 6893877289 has completed (purged errors)
[2025-11-26 23:59:24] 2025-11-27 04:58:32,111 | INFO     | overall cleanup function is called
[2025-11-26 23:59:24] 2025-11-27 04:58:33,134 | INFO     | --- collectZombieJob: --- 10, [4096461]
[2025-11-26 23:59:24] 2025-11-27 04:58:33,134 | INFO     | zombie collector waiting for pid 4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:33,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:59:24] 2025-11-27 04:58:33,134 | INFO     | collected zombie processes
[2025-11-26 23:59:24] 2025-11-27 04:58:33,134 | INFO     | will attempt to kill all subprocesses of pid=4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:34,539 | INFO     | process IDs to be killed: [4096461] (in reverse order)
[2025-11-26 23:59:24] 2025-11-27 04:58:34,957 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:59:24] 2025-11-27 04:58:34,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:59:24] 2025-11-27 04:58:34,997 | INFO     | did not find any defunct processes belonging to 4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:35,035 | INFO     | did not find any defunct processes belonging to 4096461
[2025-11-26 23:59:24] 2025-11-27 04:58:35,036 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:59:24] 2025-11-27 04:58:35,036 | INFO     | ready for new job
[2025-11-26 23:59:24] 2025-11-27 04:58:35,037 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:59:24] 2025-11-27 04:58:35,039 | INFO     | ***************************************
[2025-11-26 23:59:24] 2025-11-27 04:58:35,039 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:59:24] 2025-11-27 04:58:35,039 | INFO     | ***************************************
[2025-11-26 23:59:24] 2025-11-27 04:58:35,041 | INFO     | 
[2025-11-26 23:59:24] 2025-11-27 04:58:35,045 | INFO     | architecture information:
[2025-11-26 23:59:24] 2025-11-27 04:58:35,046 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:59:24] 2025-11-27 04:58:35,089 | INFO     | cat /etc/os-release:
[2025-11-26 23:59:24] NAME="CentOS Linux"
[2025-11-26 23:59:24] VERSION="7 (Core)"
[2025-11-26 23:59:24] ID="centos"
[2025-11-26 23:59:24] ID_LIKE="rhel fedora"
[2025-11-26 23:59:24] VERSION_ID="7"
[2025-11-26 23:59:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:59:24] ANSI_COLOR="0;31"
[2025-11-26 23:59:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:59:24] HOME_URL="https://www.centos.org/"
[2025-11-26 23:59:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:59:24] 
[2025-11-26 23:59:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:59:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:59:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:59:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:59:24] 
[2025-11-26 23:59:24] 2025-11-27 04:58:35,089 | INFO     | ***************************************
[2025-11-26 23:59:24] 2025-11-27 04:58:35,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-26 23:59:24] 2025-11-27 04:58:35,707 | INFO     | sufficient remaining disk space (80628154368 B)
[2025-11-26 23:59:24] 2025-11-27 04:58:35,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:59:24] 2025-11-27 04:58:35,707 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:59:24] 2025-11-27 04:58:35,707 | INFO     | update_server=False
[2025-11-26 23:59:24] 2025-11-27 04:58:35,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:59:24] 2025-11-27 04:58:35,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:59:24] 2025-11-27 04:58:35,920 | INFO     | all data control threads have been joined
[2025-11-26 23:59:24] 2025-11-27 04:58:36,088 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 23:59:24] 2025-11-27 04:58:36,088 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 23:59:24] 2025-11-27 04:58:36,088 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:59:24] 2025-11-27 04:58:36,088 | INFO     | will abort loop
[2025-11-26 23:59:24] 2025-11-27 04:58:36,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:59:24] 2025-11-27 04:58:36,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:59:24] 2025-11-27 04:58:36,685 | INFO     | all payload control threads have been joined
[2025-11-26 23:59:24] 2025-11-27 04:58:36,713 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:36,729 | INFO     | all job control threads have been joined
[2025-11-26 23:59:24] 2025-11-27 04:58:36,756 | INFO     | [job] validate thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:36,921 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:36,925 | INFO     | [data] control thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:36,992 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,095 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,464 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,491 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,521 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,657 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,692 | INFO     | [payload] control thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:37,735 | INFO     | [job] control thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:38,059 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:38,153 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:38,173 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:58:39,730 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:59:24] 2025-11-27 04:59:05,217 | INFO     | PID=4070704 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:59:24] 2025-11-27 04:59:05,218 | INFO     | .. there are 103 such processes running
[2025-11-26 23:59:24] 2025-11-27 04:59:05,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:59:24] 2025-11-27 04:59:05,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:59:24] 2025-11-27 04:59:05,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:59:24] 2025-11-27 04:59:16,309 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:59:24] 2025-11-27 04:59:17,985 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140240451831616)>', '<ExcThread(monitor, started 140240102598400)>']
[2025-11-26 23:59:24] 2025-11-27 04:59:18,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:59:24] 2025-11-27 04:59:18,324 | INFO     | [monitor] control thread has ended
[2025-11-26 23:59:24] 2025-11-27 04:59:23,011 | INFO     | all workflow threads have been joined
[2025-11-26 23:59:24] 2025-11-27 04:59:23,011 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:59:24] 2025-11-27 04:59:23,011 | INFO     | traces error code: 0
[2025-11-26 23:59:24] 2025-11-27 04:59:23,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:59:24] 2025-11-27 04:59:23,184 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:59:24] 2025-11-27 04:59:23,186 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:59:24] 2025-11-27 04:59:23,204 [wrapper] pilotpid: 4070704
[2025-11-26 23:59:24] 2025-11-27 04:59:23,219 [wrapper] Pilot exit status: 0
[2025-11-26 23:59:24] 2025-11-27 04:59:23,287 [wrapper] pandaids: 6893877289
[2025-11-26 23:59:24] 2025-11-27 04:59:23,512 [wrapper] cleanup supervisor_pilot   80155 4070705
[2025-11-26 23:59:24] 2025-11-27 04:59:23,523 [wrapper] Test setup, not cleaning
[2025-11-26 23:59:24] 2025-11-27 04:59:23,526 [wrapper] apfmon messages muted
[2025-11-26 23:59:24] 2025-11-27 04:59:23,528 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:59:24] 2025-11-27 04:59:23,531 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:59:24]  *** Error codes and diagnostics ***
[2025-11-26 23:59:24]     "exeErrorCode": 0,
[2025-11-26 23:59:24]     "exeErrorDiag": "",
[2025-11-26 23:59:24]     "pilotErrorCode": 0,
[2025-11-26 23:59:24]     "pilotErrorDiag": "",
[2025-11-26 23:59:24]  *** Listing of results directory ***
[2025-11-26 23:59:24] total 1311812
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 13:04 pilot3.tar.gz
[2025-11-26 23:59:24] -rwx------. 1 boincer umatlas     36292 Nov 20 13:35 runpilot2-wrapper.sh
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 13:35 queuedata.json
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:59:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:35 run_atlas
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:35 job.xml
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas 408021255 Nov 26 17:35 EVNT.47493127._000798.pool.root.1
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:35 start_atlas.sh
[2025-11-26 23:59:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:35 shared
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 17:35 input.tar.gz
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:35 boinc_lockfile
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 17:35 pandaJob.out
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas        57 Nov 26 17:35 setup.sh.local
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas    991546 Nov 26 17:35 agis_schedconf.cvmfs.json
[2025-11-26 23:59:24] drwx------. 5 boincer umatlas      4096 Nov 26 17:35 pilot3
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas       532 Nov 26 23:39 boinc_task_state.xml
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas      7170 Nov 26 23:56 init_data.xml
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas 922173533 Nov 26 23:57 HITS.47523449._007972.pool.root.1
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas      1052 Nov 26 23:57 memory_monitor_summary.json
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:57 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas   1653272 Nov 26 23:57 log.47523449._007972.job.log.tgz.1
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas      8578 Nov 26 23:58 heartbeat.json
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas        95 Nov 26 23:59 pilot_heartbeat.json
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:59 boinc_mmap_file
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:59 wrapper_checkpoint.txt
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas      5011 Nov 26 23:59 pilotlog.txt
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas   2934074 Nov 26 23:59 log.47523449._007972.job.log.1
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas       353 Nov 26 23:59 output.list
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:59 runtime_log
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas   4608000 Nov 26 23:59 result.tar.gz
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas      9333 Nov 26 23:59 runtime_log.err
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas       657 Nov 26 23:59 4JbNDmTgOg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJPIKDmcvF6Hm.diag
[2025-11-26 23:59:24] -rw-r--r--. 1 boincer umatlas     21145 Nov 26 23:59 stderr.txt
[2025-11-26 23:59:24] HITS file was successfully produced:
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas 922173533 Nov 26 23:57 shared/HITS.pool.root.1
[2025-11-26 23:59:24]  *** Contents of shared directory: ***
[2025-11-26 23:59:24] total 1304128
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas 408021255 Nov 26 17:35 ATLAS.root_0
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:35 start_atlas.sh
[2025-11-26 23:59:24] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 17:35 input.tar.gz
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas 922173533 Nov 26 23:57 HITS.pool.root.1
[2025-11-26 23:59:24] -rw-------. 1 boincer umatlas   4608000 Nov 26 23:59 result.tar.gz
23:59:25 (4060469): run_atlas exited; CPU time 134296.469291
23:59:25 (4060469): called boinc_finish(0)

</stderr_txt>
]]>

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