Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:46:01 (2001983): wrapper (7.7.26015): starting
17:46:01 (2001983): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:46:01] Arguments: --nthreads 8
[2025-11-26 17:46:01] Threads: 8
[2025-11-26 17:46:01] Checking for CVMFS
[2025-11-26 17:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:46:01] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:46:01] 2.13.3.0 9428 28972 338120 153337 0 563 17499841 18491392 23302 16776704 0 143196146 99.334 227949804 33313 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:46:01] CVMFS is ok
[2025-11-26 17:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:46:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:46:01] Further information can be found at the LHC@home message board.
[2025-11-26 17:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:46:01] Checking for apptainer binary...
[2025-11-26 17:46:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:46:01] Running /usr/bin/apptainer --version
[2025-11-26 17:46:01] apptainer version 1.4.4-1.el9
[2025-11-26 17:46:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:46:02] c-8-38.aglt2.org
[2025-11-26 17:46:02] apptainer works
[2025-11-26 17:46:02] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:46:02] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:46:02] Starting ATLAS job with PandaID=6896451278
[2025-11-26 17:46:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:35:50]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:35:50] 2025-11-27 21:34:43,506 | INFO     | time since job start (82112s) is within the limit (172800.0s)
[2025-11-27 16:35:50] 2025-11-27 21:34:44,460 | INFO     | monitor loop #4628: job 0:6896451278 is in state 'finished'
[2025-11-27 16:35:50] 2025-11-27 21:34:44,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 16:35:50] 2025-11-27 21:34:44,766 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 16:35:50] 2025-11-27 21:34:44,790 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.247775
[2025-11-27 16:35:50] 2025-11-27 21:34:44,797 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6896451278/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:35:50] 2025-11-27 21:34:44,798 | INFO     | extracted standard info from prmon json
[2025-11-27 16:35:50] 2025-11-27 21:34:44,798 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:35:50] 2025-11-27 21:34:44,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:35:50] 2025-11-27 21:34:44,823 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:35:50] 2025-11-27 21:34:44,825 | INFO     | sum of square deviations: 756196285704.1412
[2025-11-27 16:35:50] 2025-11-27 21:34:44,915 | INFO     | sum of deviations: 4051391366771.5264
[2025-11-27 16:35:50] 2025-11-27 21:34:44,916 | INFO     | mean x: 1764238221.037147
[2025-11-27 16:35:50] 2025-11-27 21:34:44,916 | INFO     | mean y: 2974584.209509658
[2025-11-27 16:35:50] 2025-11-27 21:34:44,916 | INFO     | intersect: -9449094452.314074
[2025-11-27 16:35:50] 2025-11-27 21:34:44,918 | INFO     | chi2: 6.249475605280456
[2025-11-27 16:35:50] 2025-11-27 21:34:44,920 | INFO     | sum of square deviations: 747801848904.337
[2025-11-27 16:35:50] 2025-11-27 21:34:45,048 | INFO     | sum of deviations: 4524929946412.437
[2025-11-27 16:35:50] 2025-11-27 21:34:45,048 | INFO     | mean x: 1764238068.546607
[2025-11-27 16:35:50] 2025-11-27 21:34:45,048 | INFO     | mean y: 2983185.832960477
[2025-11-27 16:35:50] 2025-11-27 21:34:45,057 | INFO     | intersect: -10672376444.079662
[2025-11-27 16:35:50] 2025-11-27 21:34:45,059 | INFO     | chi2: 3.0231347218272435
[2025-11-27 16:35:50] 2025-11-27 21:34:45,059 | INFO     | current chi2=3.0231347218272435 (change=51.62578570155768 %)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,067 | INFO     | sum of square deviations: 739469703813.9021
[2025-11-27 16:35:50] 2025-11-27 21:34:45,115 | INFO     | sum of deviations: 4703835210396.127
[2025-11-27 16:35:50] 2025-11-27 21:34:45,115 | INFO     | mean x: 1764237916.0553892
[2025-11-27 16:35:50] 2025-11-27 21:34:45,116 | INFO     | mean y: 2986458.3091317364
[2025-11-27 16:35:50] 2025-11-27 21:34:45,116 | INFO     | intersect: -11219494173.765156
[2025-11-27 16:35:50] 2025-11-27 21:34:45,118 | INFO     | chi2: 2.38254018955062
[2025-11-27 16:35:50] 2025-11-27 21:34:45,118 | INFO     | current chi2=2.38254018955062 (change=21.189744792102257 %)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,118 | INFO     | right removable region: 1335
[2025-11-27 16:35:50] 2025-11-27 21:34:45,120 | INFO     | sum of square deviations: 747800011594.6093
[2025-11-27 16:35:50] 2025-11-27 21:34:45,163 | INFO     | sum of deviations: 3716129559352.1606
[2025-11-27 16:35:50] 2025-11-27 21:34:45,163 | INFO     | mean x: 1764238373.54437
[2025-11-27 16:35:50] 2025-11-27 21:34:45,163 | INFO     | mean y: 2980667.047725578
[2025-11-27 16:35:50] 2025-11-27 21:34:45,164 | INFO     | intersect: -8764254246.055977
[2025-11-27 16:35:50] 2025-11-27 21:34:45,165 | INFO     | chi2: 4.442555615179802
[2025-11-27 16:35:50] 2025-11-27 21:34:45,166 | INFO     | current chi2=4.442555615179802 (change=28.913145745763185 %)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,167 | INFO     | sum of square deviations: 739466765414.2142
[2025-11-27 16:35:50] 2025-11-27 21:34:45,242 | INFO     | sum of deviations: 3591931034006.526
[2025-11-27 16:35:50] 2025-11-27 21:34:45,242 | INFO     | mean x: 1764238526.0456586
[2025-11-27 16:35:50] 2025-11-27 21:34:45,242 | INFO     | mean y: 2982939.7290419163
[2025-11-27 16:35:50] 2025-11-27 21:34:45,242 | INFO     | intersect: -8566737038.887755
[2025-11-27 16:35:50] 2025-11-27 21:34:45,247 | INFO     | chi2: 4.34454991426129
[2025-11-27 16:35:50] 2025-11-27 21:34:45,247 | INFO     | current chi2=4.34454991426129 (change=2.2060658190442415 %)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,247 | INFO     | left removable region: 20
[2025-11-27 16:35:50] 2025-11-27 21:34:45,249 | INFO     | sum of square deviations: 705145418430.3849
[2025-11-27 16:35:50] 2025-11-27 21:34:45,292 | INFO     | sum of deviations: 4059773732280.419
[2025-11-27 16:35:50] 2025-11-27 21:34:45,292 | INFO     | mean x: 1764238495.5695817
[2025-11-27 16:35:50] 2025-11-27 21:34:45,293 | INFO     | mean y: 2998358.9406844107
[2025-11-27 16:35:50] 2025-11-27 21:34:45,293 | INFO     | intersect: -10154352046.503971
[2025-11-27 16:35:50] 2025-11-27 21:34:45,294 | INFO     | chi2: 0.4011485452835645
[2025-11-27 16:35:50] 2025-11-27 21:34:45,295 | INFO     | current memory leak: 5.76 B/s (using 1315 data points, chi2=0.40)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,296 | INFO     | could have reported an average CPU frequency of 2600 MHz (48 samples)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,296 | INFO     | ..............................
[2025-11-27 16:35:50] 2025-11-27 21:34:45,296 | INFO     | . Timing measurements:
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . get job = 0 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . initial setup = 2 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . payload setup = 6 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . stage-in = 0 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . payload execution = 82073 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . stage-out = 5 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | . log creation = 1 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,297 | INFO     | ..............................
[2025-11-27 16:35:50] 2025-11-27 21:34:45,413 | INFO     | 
[2025-11-27 16:35:50] 2025-11-27 21:34:45,413 | INFO     | job summary report
[2025-11-27 16:35:50] 2025-11-27 21:34:45,413 | INFO     | --------------------------------------------------
[2025-11-27 16:35:50] 2025-11-27 21:34:45,413 | INFO     | PanDA job id: 6896451278
[2025-11-27 16:35:50] 2025-11-27 21:34:45,413 | INFO     | task id: 47556149
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | errors: (none)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | pilot state: finished 
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | transexitcode: 0
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | exeerrorcode: 0
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | exeerrordiag: 
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | exitcode: 0
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | exitmsg: OK
[2025-11-27 16:35:50] 2025-11-27 21:34:45,414 | INFO     | cpuconsumptiontime: 305904 s
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | nevents: 1000
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | neventsw: 0
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | pid: 2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | pgrp: 2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | corecount: 8
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | event service: False
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | sizes: {0: 2284143, 1: 2284342, 4: 2284604, 12: 2284632, 82083: 2347148, 82089: 2356142, 82090: 2356326, 82099: 2356572}
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | --------------------------------------------------
[2025-11-27 16:35:50] 2025-11-27 21:34:45,415 | INFO     | 
[2025-11-27 16:35:50] 2025-11-27 21:34:45,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 16:35:50] 2025-11-27 21:34:45,455 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,456 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,457 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:35:50] 2025-11-27 21:34:45,458 | INFO     | job 6896451278 has completed (purged errors)
[2025-11-27 16:35:50] 2025-11-27 21:34:45,458 | INFO     | overall cleanup function is called
[2025-11-27 16:35:50] 2025-11-27 21:34:46,476 | INFO     | --- collectZombieJob: --- 10, [2054852]
[2025-11-27 16:35:50] 2025-11-27 21:34:46,477 | INFO     | zombie collector waiting for pid 2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:46,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:35:50] 2025-11-27 21:34:46,479 | INFO     | collected zombie processes
[2025-11-27 16:35:50] 2025-11-27 21:34:46,479 | INFO     | will attempt to kill all subprocesses of pid=2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:47,091 | INFO     | process IDs to be killed: [2054852] (in reverse order)
[2025-11-27 16:35:50] 2025-11-27 21:34:47,253 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:35:50] 2025-11-27 21:34:47,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:35:50] 2025-11-27 21:34:47,275 | INFO     | did not find any defunct processes belonging to 2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:47,313 | INFO     | did not find any defunct processes belonging to 2054852
[2025-11-27 16:35:50] 2025-11-27 21:34:47,318 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:35:50] 2025-11-27 21:34:47,318 | INFO     | ready for new job
[2025-11-27 16:35:50] 2025-11-27 21:34:47,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:35:50] 2025-11-27 21:34:47,326 | INFO     | ***************************************
[2025-11-27 16:35:50] 2025-11-27 21:34:47,326 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:35:50] 2025-11-27 21:34:47,327 | INFO     | ***************************************
[2025-11-27 16:35:50] 2025-11-27 21:34:47,327 | INFO     | 
[2025-11-27 16:35:50] 2025-11-27 21:34:47,329 | INFO     | architecture information:
[2025-11-27 16:35:50] 2025-11-27 21:34:47,337 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:35:50] 2025-11-27 21:34:47,365 | INFO     | cat /etc/os-release:
[2025-11-27 16:35:50] NAME="CentOS Linux"
[2025-11-27 16:35:50] VERSION="7 (Core)"
[2025-11-27 16:35:50] ID="centos"
[2025-11-27 16:35:50] ID_LIKE="rhel fedora"
[2025-11-27 16:35:50] VERSION_ID="7"
[2025-11-27 16:35:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:35:50] ANSI_COLOR="0;31"
[2025-11-27 16:35:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:35:50] HOME_URL="https://www.centos.org/"
[2025-11-27 16:35:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:35:50] 
[2025-11-27 16:35:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:35:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:35:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:35:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:35:50] 
[2025-11-27 16:35:50] 2025-11-27 21:34:47,366 | INFO     | ***************************************
[2025-11-27 16:35:50] 2025-11-27 21:34:47,874 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 16:35:50] 2025-11-27 21:34:47,892 | INFO     | sufficient remaining disk space (90865401856 B)
[2025-11-27 16:35:50] 2025-11-27 21:34:47,892 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:35:50] 2025-11-27 21:34:47,893 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:35:50] 2025-11-27 21:34:47,893 | INFO     | update_server=False
[2025-11-27 16:35:50] 2025-11-27 21:34:47,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:35:50] 2025-11-27 21:34:47,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:35:50] 2025-11-27 21:34:47,986 | INFO     | aborting loop
[2025-11-27 16:35:50] 2025-11-27 21:34:48,022 | INFO     | all data control threads have been joined
[2025-11-27 16:35:50] 2025-11-27 21:34:48,367 | INFO     | all job control threads have been joined
[2025-11-27 16:35:50] 2025-11-27 21:34:48,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:35:50] 2025-11-27 21:34:48,899 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:48,992 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,028 | INFO     | [data] control thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,060 | INFO     | all payload control threads have been joined
[2025-11-27 16:35:50] 2025-11-27 21:34:49,065 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,373 | INFO     | [job] control thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,471 | INFO     | [job] validate thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,754 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,907 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,937 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:49,965 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:50,000 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:50,066 | INFO     | [payload] control thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:50,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:35:50] 2025-11-27 21:34:50,447 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:50,892 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:51,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:35:50] 2025-11-27 21:34:51,434 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:34:55,039 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:35:50] 2025-11-27 21:35:17,123 | INFO     | PID=2010791 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:35:50] 2025-11-27 21:35:17,123 | INFO     | .. there are 43 such processes running
[2025-11-27 16:35:50] 2025-11-27 21:35:17,124 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:35:50] 2025-11-27 21:35:17,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:35:50] 2025-11-27 21:35:17,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:35:50] 2025-11-27 21:35:43,575 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:35:50] 2025-11-27 21:35:44,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381788534592)>', '<ExcThread(monitor, started 140381073176320)>']
[2025-11-27 16:35:50] 2025-11-27 21:35:45,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:35:50] 2025-11-27 21:35:45,341 | INFO     | [monitor] control thread has ended
[2025-11-27 16:35:50] 2025-11-27 21:35:49,545 | INFO     | all workflow threads have been joined
[2025-11-27 16:35:50] 2025-11-27 21:35:49,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:35:50] 2025-11-27 21:35:49,546 | INFO     | traces error code: 0
[2025-11-27 16:35:50] 2025-11-27 21:35:49,546 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:35:50] 2025-11-27 21:35:49,801 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:35:50] 2025-11-27 21:35:49,803 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:35:50] 2025-11-27 21:35:49,806 [wrapper] pilotpid: 2010791
[2025-11-27 16:35:50] 2025-11-27 21:35:49,808 [wrapper] Pilot exit status: 0
[2025-11-27 16:35:50] 2025-11-27 21:35:49,825 [wrapper] pandaids: 6896451278
[2025-11-27 16:35:50] 2025-11-27 21:35:49,910 [wrapper] cleanup supervisor_pilot 1856606 2010792
[2025-11-27 16:35:50] 2025-11-27 21:35:49,913 [wrapper] Test setup, not cleaning
[2025-11-27 16:35:50] 2025-11-27 21:35:49,931 [wrapper] apfmon messages muted
[2025-11-27 16:35:50] 2025-11-27 21:35:49,937 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:35:50] 2025-11-27 21:35:49,940 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:35:50]  *** Error codes and diagnostics ***
[2025-11-27 16:35:50]     "exeErrorCode": 0,
[2025-11-27 16:35:50]     "exeErrorDiag": "",
[2025-11-27 16:35:50]     "pilotErrorCode": 0,
[2025-11-27 16:35:50]     "pilotErrorDiag": "",
[2025-11-27 16:35:50]  *** Listing of results directory ***
[2025-11-27 16:35:50] total 1335220
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:30 queuedata.json
[2025-11-27 16:35:50] -rwx------. 1 boincer umatlas     36292 Nov 24 23:32 runpilot2-wrapper.sh
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:35:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:46 run_atlas
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:46 job.xml
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas 410368650 Nov 26 17:46 EVNT.47483658._001512.pool.root.1
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:46 start_atlas.sh
[2025-11-27 16:35:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:46 shared
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas    590112 Nov 26 17:46 input.tar.gz
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:46 boinc_lockfile
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 17:46 pandaJob.out
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas        57 Nov 26 17:46 setup.sh.local
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas    991546 Nov 26 17:46 agis_schedconf.cvmfs.json
[2025-11-27 16:35:50] drwx------. 5 boincer umatlas      4096 Nov 26 17:46 pilot3
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas       533 Nov 27 16:22 boinc_task_state.xml
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 16:29 init_data.xml
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas 928329016 Nov 27 16:33 HITS.47556149._004984.pool.root.1
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas        95 Nov 27 16:34 pilot_heartbeat.json
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas      1057 Nov 27 16:34 memory_monitor_summary.json
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas   2351179 Nov 27 16:34 log.47556149._004984.job.log.tgz.1
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas      8627 Nov 27 16:34 heartbeat.json
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:35 boinc_mmap_file
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas        29 Nov 27 16:35 wrapper_checkpoint.txt
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas      4824 Nov 27 16:35 pilotlog.txt
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas   9971569 Nov 27 16:35 log.47556149._004984.job.log.1
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas       353 Nov 27 16:35 output.list
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:35 runtime_log
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas  12339200 Nov 27 16:35 result.tar.gz
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas       660 Nov 27 16:35 TD1MDmeuzh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmi7LKDmbb5Xqm.diag
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 16:35 runtime_log.err
[2025-11-27 16:35:50] -rw-r--r--. 1 boincer umatlas     21324 Nov 27 16:35 stderr.txt
[2025-11-27 16:35:50] HITS file was successfully produced:
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas 928329016 Nov 27 16:33 shared/HITS.pool.root.1
[2025-11-27 16:35:50]  *** Contents of shared directory: ***
[2025-11-27 16:35:50] total 1319980
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas 410368650 Nov 26 17:46 ATLAS.root_0
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:46 start_atlas.sh
[2025-11-27 16:35:50] -rw-r--r--. 2 boincer umatlas    590112 Nov 26 17:46 input.tar.gz
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas 928329016 Nov 27 16:33 HITS.pool.root.1
[2025-11-27 16:35:50] -rw-------. 1 boincer umatlas  12339200 Nov 27 16:35 result.tar.gz
16:35:51 (2001983): run_atlas exited; CPU time 308680.981551
16:35:51 (2001983): called boinc_finish(0)

</stderr_txt>
]]>

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