Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:49:48 (2539981): wrapper (7.7.26015): starting
18:49:48 (2539981): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 18:49:48] Arguments: --nthreads 9
[2025-11-26 18:49:48] Threads: 9
[2025-11-26 18:49:48] Checking for CVMFS
[2025-11-26 18:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:49:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:49:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:49:50] 2.13.3.0 11226 29034 347540 153340 4 533 23569468 32935936 19144 16776704 0 68332890 99.473 94698850 40064 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:49:50] CVMFS is ok
[2025-11-26 18:49:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:49:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:49:50] Further information can be found at the LHC@home message board.
[2025-11-26 18:49:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:49:50] Checking for apptainer binary...
[2025-11-26 18:49:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:49:50] Running /usr/bin/apptainer --version
[2025-11-26 18:49:50] apptainer version 1.4.4-1.el9
[2025-11-26 18:49:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:49:50] c6-2-29-3.aglt2.org
[2025-11-26 18:49:50] apptainer works
[2025-11-26 18:49:50] Set ATHENA_PROC_NUMBER=9
[2025-11-26 18:49:50] Set ATHENA_CORE_NUMBER=9
[2025-11-26 18:49:50] Starting ATLAS job with PandaID=6897139454
[2025-11-26 18:49:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:22:43]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:22:43] 2025-11-27 12:22:07,891 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:22:43] 2025-11-27 12:22:07,905 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:22:43] 2025-11-27 12:22:07,906 | INFO     | sum of square deviations: 125138971054.4573
[2025-11-27 07:22:43] 2025-11-27 12:22:07,917 | INFO     | sum of deviations: 1286599778125.2065
[2025-11-27 07:22:43] 2025-11-27 12:22:07,918 | INFO     | mean x: 1764223578.9133966
[2025-11-27 07:22:43] 2025-11-27 12:22:07,918 | INFO     | mean y: 3059576.8782138024
[2025-11-27 07:22:43] 2025-11-27 12:22:07,918 | INFO     | intersect: -18135571786.85142
[2025-11-27 07:22:43] 2025-11-27 12:22:07,919 | INFO     | chi2: 6.499669789769128
[2025-11-27 07:22:43] 2025-11-27 12:22:07,920 | INFO     | sum of square deviations: 122616406163.52727
[2025-11-27 07:22:43] 2025-11-27 12:22:07,931 | INFO     | sum of deviations: 1555931642637.236
[2025-11-27 07:22:43] 2025-11-27 12:22:07,932 | INFO     | mean x: 1764223426.4264305
[2025-11-27 07:22:43] 2025-11-27 12:22:07,932 | INFO     | mean y: 3075855.059945504
[2025-11-27 07:22:43] 2025-11-27 12:22:07,932 | INFO     | intersect: -22383904319.50077
[2025-11-27 07:22:43] 2025-11-27 12:22:07,933 | INFO     | chi2: 3.183241810706274
[2025-11-27 07:22:43] 2025-11-27 12:22:07,934 | INFO     | current chi2=3.183241810706274 (change=51.024561036671614 %)
[2025-11-27 07:22:43] 2025-11-27 12:22:07,935 | INFO     | sum of square deviations: 120127892271.09756
[2025-11-27 07:22:43] 2025-11-27 12:22:07,947 | INFO     | sum of deviations: 1657221502904.551
[2025-11-27 07:22:43] 2025-11-27 12:22:07,948 | INFO     | mean x: 1764223273.9369
[2025-11-27 07:22:43] 2025-11-27 12:22:07,948 | INFO     | mean y: 3082035.120713306
[2025-11-27 07:22:43] 2025-11-27 12:22:07,948 | INFO     | intersect: -24335218506.22936
[2025-11-27 07:22:43] 2025-11-27 12:22:07,950 | INFO     | chi2: 2.053930072273356
[2025-11-27 07:22:43] 2025-11-27 12:22:07,950 | INFO     | current chi2=2.053930072273356 (change=35.47678139419621 %)
[2025-11-27 07:22:43] 2025-11-27 12:22:07,951 | INFO     | sum of square deviations: 117673107758.56302
[2025-11-27 07:22:43] 2025-11-27 12:22:07,963 | INFO     | sum of deviations: 1631118093250.924
[2025-11-27 07:22:43] 2025-11-27 12:22:07,963 | INFO     | mean x: 1764223121.441989
[2025-11-27 07:22:43] 2025-11-27 12:22:07,964 | INFO     | mean y: 3080413.5814917125
[2025-11-27 07:22:43] 2025-11-27 12:22:07,964 | INFO     | intersect: -24451583092.20362
[2025-11-27 07:22:43] 2025-11-27 12:22:07,966 | INFO     | chi2: 2.0526748653567353
[2025-11-27 07:22:43] 2025-11-27 12:22:07,966 | INFO     | current chi2=2.0526748653567353 (change=0.06111244650269077 %)
[2025-11-27 07:22:43] 2025-11-27 12:22:07,966 | INFO     | right removable region: 723
[2025-11-27 07:22:43] 2025-11-27 12:22:07,967 | INFO     | sum of square deviations: 122615633421.22751
[2025-11-27 07:22:43] 2025-11-27 12:22:07,979 | INFO     | sum of deviations: 1093933486470.8782
[2025-11-27 07:22:43] 2025-11-27 12:22:07,979 | INFO     | mean x: 1764223731.4237058
[2025-11-27 07:22:43] 2025-11-27 12:22:07,979 | INFO     | mean y: 3071195.765667575
[2025-11-27 07:22:43] 2025-11-27 12:22:07,979 | INFO     | intersect: -15736711437.016298
[2025-11-27 07:22:43] 2025-11-27 12:22:07,980 | INFO     | chi2: 4.528844283680104
[2025-11-27 07:22:43] 2025-11-27 12:22:07,980 | INFO     | current chi2=4.528844283680104 (change=30.321932803282138 %)
[2025-11-27 07:22:43] 2025-11-27 12:22:07,981 | INFO     | sum of square deviations: 120126570659.43219
[2025-11-27 07:22:43] 2025-11-27 12:22:07,991 | INFO     | sum of deviations: 1058090035625.7156
[2025-11-27 07:22:43] 2025-11-27 12:22:07,991 | INFO     | mean x: 1764223883.930041
[2025-11-27 07:22:43] 2025-11-27 12:22:07,991 | INFO     | mean y: 3073390.131687243
[2025-11-27 07:22:43] 2025-11-27 12:22:07,992 | INFO     | intersect: -15536433830.893805
[2025-11-27 07:22:43] 2025-11-27 12:22:07,992 | INFO     | chi2: 4.5221298331858915
[2025-11-27 07:22:43] 2025-11-27 12:22:07,993 | INFO     | current chi2=4.5221298331858915 (change=0.14825968997009 %)
[2025-11-27 07:22:43] 2025-11-27 12:22:07,993 | INFO     | left removable region: 20
[2025-11-27 07:22:43] 2025-11-27 12:22:07,994 | INFO     | sum of square deviations: 107726421439.53903
[2025-11-27 07:22:43] 2025-11-27 12:22:08,003 | INFO     | sum of deviations: 1347097599885.7805
[2025-11-27 07:22:43] 2025-11-27 12:22:08,003 | INFO     | mean x: 1764223700.9743955
[2025-11-27 07:22:43] 2025-11-27 12:22:08,004 | INFO     | mean y: 3097817.543385491
[2025-11-27 07:22:43] 2025-11-27 12:22:08,004 | INFO     | intersect: -22058170731.863155
[2025-11-27 07:22:43] 2025-11-27 12:22:08,004 | INFO     | chi2: 0.03363739271018902
[2025-11-27 07:22:43] 2025-11-27 12:22:08,005 | INFO     | current memory leak: 12.50 B/s (using 703 data points, chi2=0.03)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | could have reported an average CPU frequency of 2827 MHz (28 samples)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | ..............................
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . Timing measurements:
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . get job = 0 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . initial setup = 4 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . payload setup = 15 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . stage-in = 0 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . payload execution = 45051 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . stage-out = 3 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | . log creation = 0 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,006 | INFO     | ..............................
[2025-11-27 07:22:43] 2025-11-27 12:22:08,062 | INFO     | time since job start (45111s) is within the limit (172800.0s)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | 
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | job summary report
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | --------------------------------------------------
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | PanDA job id: 6897139454
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | task id: 47556161
[2025-11-27 07:22:43] 2025-11-27 12:22:08,420 | INFO     | errors: (none)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | pilot state: finished 
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | transexitcode: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | exeerrorcode: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | exeerrordiag: 
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | exitcode: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | exitmsg: OK
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | cpuconsumptiontime: 250357 s
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | nevents: 1000
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | neventsw: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | pid: 2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | pgrp: 2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | corecount: 9
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | event service: False
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | sizes: {0: 2284088, 1: 2284287, 11: 2284549, 12: 2284577, 45071: 2330884, 45076: 2339878, 45079: 2340062, 45086: 2340308}
[2025-11-27 07:22:43] 2025-11-27 12:22:08,421 | INFO     | --------------------------------------------------
[2025-11-27 07:22:43] 2025-11-27 12:22:08,422 | INFO     | 
[2025-11-27 07:22:43] 2025-11-27 12:22:08,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 07:22:43] 2025-11-27 12:22:08,442 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,442 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,443 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | job 6897139454 has completed (purged errors)
[2025-11-27 07:22:43] 2025-11-27 12:22:08,444 | INFO     | overall cleanup function is called
[2025-11-27 07:22:43] 2025-11-27 12:22:09,463 | INFO     | --- collectZombieJob: --- 10, [2553698]
[2025-11-27 07:22:43] 2025-11-27 12:22:09,463 | INFO     | zombie collector waiting for pid 2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:09,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:22:43] 2025-11-27 12:22:09,463 | INFO     | collected zombie processes
[2025-11-27 07:22:43] 2025-11-27 12:22:09,463 | INFO     | will attempt to kill all subprocesses of pid=2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:09,819 | INFO     | process IDs to be killed: [2553698] (in reverse order)
[2025-11-27 07:22:43] 2025-11-27 12:22:09,947 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:22:43] 2025-11-27 12:22:09,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:22:43] 2025-11-27 12:22:09,959 | INFO     | did not find any defunct processes belonging to 2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:09,973 | INFO     | did not find any defunct processes belonging to 2553698
[2025-11-27 07:22:43] 2025-11-27 12:22:09,975 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:22:43] 2025-11-27 12:22:09,975 | INFO     | ready for new job
[2025-11-27 07:22:43] 2025-11-27 12:22:09,975 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:22:43] 2025-11-27 12:22:09,979 | INFO     | ***************************************
[2025-11-27 07:22:43] 2025-11-27 12:22:09,980 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:22:43] 2025-11-27 12:22:09,980 | INFO     | ***************************************
[2025-11-27 07:22:43] 2025-11-27 12:22:09,980 | INFO     | 
[2025-11-27 07:22:43] 2025-11-27 12:22:09,983 | INFO     | architecture information:
[2025-11-27 07:22:43] 2025-11-27 12:22:09,984 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:22:43] 2025-11-27 12:22:10,017 | INFO     | cat /etc/os-release:
[2025-11-27 07:22:43] NAME="CentOS Linux"
[2025-11-27 07:22:43] VERSION="7 (Core)"
[2025-11-27 07:22:43] ID="centos"
[2025-11-27 07:22:43] ID_LIKE="rhel fedora"
[2025-11-27 07:22:43] VERSION_ID="7"
[2025-11-27 07:22:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:22:43] ANSI_COLOR="0;31"
[2025-11-27 07:22:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:22:43] HOME_URL="https://www.centos.org/"
[2025-11-27 07:22:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:22:43] 
[2025-11-27 07:22:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:22:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:22:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:22:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:22:43] 
[2025-11-27 07:22:43] 2025-11-27 12:22:10,018 | INFO     | ***************************************
[2025-11-27 07:22:43] 2025-11-27 12:22:10,524 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 07:22:43] 2025-11-27 12:22:10,543 | INFO     | sufficient remaining disk space (68873617408 B)
[2025-11-27 07:22:43] 2025-11-27 12:22:10,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:22:43] 2025-11-27 12:22:10,544 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:22:43] 2025-11-27 12:22:10,544 | INFO     | update_server=False
[2025-11-27 07:22:43] 2025-11-27 12:22:10,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:22:43] 2025-11-27 12:22:10,544 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:22:43] 2025-11-27 12:22:10,545 | INFO     | aborting loop
[2025-11-27 07:22:43] 2025-11-27 12:22:10,910 | INFO     | all job control threads have been joined
[2025-11-27 07:22:43] 2025-11-27 12:22:11,318 | INFO     | all data control threads have been joined
[2025-11-27 07:22:43] 2025-11-27 12:22:11,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:22:43] 2025-11-27 12:22:11,550 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:11,555 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:11,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:22:43] 2025-11-27 12:22:11,904 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:11,915 | INFO     | [job] control thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:11,924 | INFO     | all payload control threads have been joined
[2025-11-27 07:22:43] 2025-11-27 12:22:11,965 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,109 | INFO     | [job] validate thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,197 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,252 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,279 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,323 | INFO     | [data] control thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,374 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:12,931 | INFO     | [payload] control thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:13,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:22:43] 2025-11-27 12:22:13,517 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:14,112 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:15,613 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:22:43] 2025-11-27 12:22:35,756 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:22:43] 2025-11-27 12:22:36,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140468414039872)>', '<ExcThread(monitor, started 140467693934336)>']
[2025-11-27 07:22:43] 2025-11-27 12:22:42,019 | INFO     | all workflow threads have been joined
[2025-11-27 07:22:43] 2025-11-27 12:22:42,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:22:43] 2025-11-27 12:22:42,020 | INFO     | traces error code: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:42,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:22:43] 2025-11-27 12:22:42,186 | INFO     | PID=2545213 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:22:43] 2025-11-27 12:22:42,186 | INFO     | .. there are 27 such processes running
[2025-11-27 07:22:43] 2025-11-27 12:22:42,188 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:22:43] 2025-11-27 12:22:42,188 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:22:43] 2025-11-27 12:22:42,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:22:43] 2025-11-27 12:22:42,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:22:43] 2025-11-27 12:22:42,189 | INFO     | [monitor] control thread has ended
[2025-11-27 07:22:43] 2025-11-27 12:22:42,634 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:22:43] 2025-11-27 12:22:42,639 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:22:43] 2025-11-27 12:22:42,642 [wrapper] pilotpid: 2545213
[2025-11-27 07:22:43] 2025-11-27 12:22:42,645 [wrapper] Pilot exit status: 0
[2025-11-27 07:22:43] 2025-11-27 12:22:42,662 [wrapper] pandaids: 6897139454
[2025-11-27 07:22:43] 2025-11-27 12:22:42,749 [wrapper] cleanup supervisor_pilot  568580 2545214
[2025-11-27 07:22:43] 2025-11-27 12:22:42,803 [wrapper] Test setup, not cleaning
[2025-11-27 07:22:43] 2025-11-27 12:22:42,855 [wrapper] apfmon messages muted
[2025-11-27 07:22:43] 2025-11-27 12:22:42,900 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:22:43] 2025-11-27 12:22:42,946 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:22:43]  *** Error codes and diagnostics ***
[2025-11-27 07:22:43]     "exeErrorCode": 0,
[2025-11-27 07:22:43]     "exeErrorDiag": "",
[2025-11-27 07:22:43]     "pilotErrorCode": 0,
[2025-11-27 07:22:43]     "pilotErrorDiag": "",
[2025-11-27 07:22:43]  *** Listing of results directory ***
[2025-11-27 07:22:43] total 1315984
[2025-11-27 07:22:43] -rwx------. 1 boincer umatlas     36292 Nov 25 11:48 runpilot2-wrapper.sh
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:48 queuedata.json
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:22:43] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:49 run_atlas
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:49 job.xml
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas 410932706 Nov 26 18:49 EVNT.47483658._002181.pool.root.1
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:49 start_atlas.sh
[2025-11-27 07:22:43] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:49 shared
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 18:49 input.tar.gz
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:49 boinc_lockfile
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas      2783 Nov 26 18:49 pandaJob.out
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas        57 Nov 26 18:49 setup.sh.local
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas    991538 Nov 26 18:50 agis_schedconf.cvmfs.json
[2025-11-27 07:22:43] drwx------. 5 boincer umatlas      4096 Nov 26 18:50 pilot3
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas       533 Nov 27 07:12 boinc_task_state.xml
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas 916716740 Nov 27 07:21 HITS.47556161._001641.pool.root.1
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas      1056 Nov 27 07:21 memory_monitor_summary.json
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas   2070757 Nov 27 07:21 log.47556161._001641.job.log.tgz.1
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas      6845 Nov 27 07:22 init_data.xml
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas      8616 Nov 27 07:22 heartbeat.json
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas        95 Nov 27 07:22 pilot_heartbeat.json
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas       823 Nov 27 07:22 pilotlog.txt
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:22 boinc_mmap_file
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:22 wrapper_checkpoint.txt
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas   5928391 Nov 27 07:22 log.47556161._001641.job.log.1
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas       353 Nov 27 07:22 output.list
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:22 runtime_log
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas   8017920 Nov 27 07:22 result.tar.gz
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 07:22 runtime_log.err
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas       661 Nov 27 07:22 6iGKDmSOBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm7OMKDmeNcgLn.diag
[2025-11-27 07:22:43] -rw-r--r--. 1 boincer umatlas     21148 Nov 27 07:22 stderr.txt
[2025-11-27 07:22:43] HITS file was successfully produced:
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas 916716740 Nov 27 07:21 shared/HITS.pool.root.1
[2025-11-27 07:22:43]  *** Contents of shared directory: ***
[2025-11-27 07:22:43] total 1304972
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas 410932706 Nov 26 18:49 ATLAS.root_0
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:49 start_atlas.sh
[2025-11-27 07:22:43] -rw-r--r--. 2 boincer umatlas    590094 Nov 26 18:49 input.tar.gz
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas 916716740 Nov 27 07:21 HITS.pool.root.1
[2025-11-27 07:22:43] -rw-------. 1 boincer umatlas   8017920 Nov 27 07:22 result.tar.gz
07:22:44 (2539981): run_atlas exited; CPU time 251147.747068
07:22:44 (2539981): called boinc_finish(0)

</stderr_txt>
]]>

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