Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:14:41 (282670): wrapper (7.7.26015): starting
18:14:41 (282670): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:14:41] Arguments: --nthreads 8
[2025-11-26 18:14:41] Threads: 8
[2025-11-26 18:14:41] Checking for CVMFS
[2025-11-26 18:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:14:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:14:42] 2.13.2.0 7884 37296 211376 153339 1 346 23561994 40960000 25946 16776704 0 385210047 99.728 274946597 47184 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:14:42] CVMFS is ok
[2025-11-26 18:14:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:14:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:14:42] Further information can be found at the LHC@home message board.
[2025-11-26 18:14:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:14:42] Checking for apptainer binary...
[2025-11-26 18:14:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:14:42] Running /usr/bin/apptainer --version
[2025-11-26 18:14:42] apptainer version 1.4.4-1.el9
[2025-11-26 18:14:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:14:43] c-208-38.aglt2.org
[2025-11-26 18:14:43] apptainer works
[2025-11-26 18:14:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:14:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:14:43] Starting ATLAS job with PandaID=6896577524
[2025-11-26 18:14:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:14:40]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:14:41] 2025-11-27 11:13:21,273 | INFO     | time since job start (43085s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:22,831 | INFO     | monitor loop #2594: job 0:6896577524 is in state 'finished'
[2025-11-27 06:14:41] 2025-11-27 11:13:22,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:14:41] 2025-11-27 11:13:23,282 | INFO     | time since job start (43087s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:25,289 | INFO     | time since job start (43089s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:25,341 | INFO     | monitor loop #2595: job 0:6896577524 is in state 'finished'
[2025-11-27 06:14:41] 2025-11-27 11:13:25,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:14:41] 2025-11-27 11:13:27,296 | INFO     | time since job start (43091s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:27,848 | INFO     | monitor loop #2596: job 0:6896577524 is in state 'finished'
[2025-11-27 06:14:41] 2025-11-27 11:13:27,848 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:14:41] 2025-11-27 11:13:29,306 | INFO     | time since job start (43093s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:30,354 | INFO     | monitor loop #2597: job 0:6896577524 is in state 'finished'
[2025-11-27 06:14:41] 2025-11-27 11:13:30,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:14:41] 2025-11-27 11:13:31,329 | INFO     | time since job start (43095s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:32,868 | INFO     | monitor loop #2598: job 0:6896577524 is in state 'finished'
[2025-11-27 06:14:41] 2025-11-27 11:13:32,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,142 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 06:14:41] 2025-11-27 11:13:33,167 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3742.495703125
[2025-11-27 06:14:41] 2025-11-27 11:13:33,207 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6896577524/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,207 | INFO     | extracted standard info from prmon json
[2025-11-27 06:14:41] 2025-11-27 11:13:33,207 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:14:41] 2025-11-27 11:13:33,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:14:41] 2025-11-27 11:13:33,227 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:14:41] 2025-11-27 11:13:33,245 | INFO     | sum of square deviations: 108658277288.0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,279 | INFO     | sum of deviations: 141975813919.00153
[2025-11-27 06:14:41] 2025-11-27 11:13:33,279 | INFO     | mean x: 1764220433.0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,279 | INFO     | mean y: 2928846.7375886524
[2025-11-27 06:14:41] 2025-11-27 11:13:33,279 | INFO     | intersect: -2302248799.72755
[2025-11-27 06:14:41] 2025-11-27 11:13:33,279 | INFO     | chi2: 22.495664084106934
[2025-11-27 06:14:41] 2025-11-27 11:13:33,280 | INFO     | sum of square deviations: 106363708222.42865
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | sum of deviations: 388305674473.12946
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | mean x: 1764220280.5285714
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | mean y: 2945209.818571429
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | intersect: -6437754887.974412
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | chi2: 18.626004503081475
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | current chi2=18.626004503081475 (change=17.201801940843136 %)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,298 | INFO     | right removable region: 699
[2025-11-27 06:14:41] 2025-11-27 11:13:33,299 | INFO     | sum of square deviations: 106362073556.53702
[2025-11-27 06:14:41] 2025-11-27 11:13:33,308 | INFO     | sum of deviations: -30204425733.251823
[2025-11-27 06:14:41] 2025-11-27 11:13:33,309 | INFO     | mean x: 1764220585.5257144
[2025-11-27 06:14:41] 2025-11-27 11:13:33,309 | INFO     | mean y: 2940257.402857143
[2025-11-27 06:14:41] 2025-11-27 11:13:33,309 | INFO     | intersect: 503939042.691304
[2025-11-27 06:14:41] 2025-11-27 11:13:33,313 | INFO     | chi2: 20.723861701635855
[2025-11-27 06:14:41] 2025-11-27 11:13:33,313 | INFO     | current chi2=20.723861701635855 (change=7.876195056285752 %)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,313 | INFO     | left removable region: 10
[2025-11-27 06:14:41] 2025-11-27 11:13:33,314 | INFO     | sum of square deviations: 101426792098.28436
[2025-11-27 06:14:41] 2025-11-27 11:13:33,323 | INFO     | sum of deviations: 219006552970.37015
[2025-11-27 06:14:41] 2025-11-27 11:13:33,323 | INFO     | mean x: 1764220555.0827286
[2025-11-27 06:14:41] 2025-11-27 11:13:33,324 | INFO     | mean y: 2962893.291727141
[2025-11-27 06:14:41] 2025-11-27 11:13:33,324 | INFO     | intersect: -3806443422.8790174
[2025-11-27 06:14:41] 2025-11-27 11:13:33,324 | INFO     | chi2: 16.1226880646285
[2025-11-27 06:14:41] 2025-11-27 11:13:33,324 | INFO     | current memory leak: 2.16 B/s (using 689 data points, chi2=16.12)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | could have reported an average CPU frequency of 3729 MHz (27 samples)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | ..............................
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . Timing measurements:
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . get job = 0 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . initial setup = 2 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . payload setup = 12 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . stage-in = 0 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . payload execution = 43013 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . stage-out = 8 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | . log creation = 1 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,325 | INFO     | ..............................
[2025-11-27 06:14:41] 2025-11-27 11:13:33,337 | INFO     | time since job start (43097s) is within the limit (172800.0s)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | 
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | job summary report
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | --------------------------------------------------
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | PanDA job id: 6896577524
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | task id: 47556173
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | errors: (none)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | pilot state: finished 
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | transexitcode: 0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | exeerrorcode: 0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | exeerrordiag: 
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | exitcode: 0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | exitmsg: OK
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | cpuconsumptiontime: 139852 s
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | nevents: 1000
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | neventsw: 0
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | pid: 327897
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | pgrp: 327897
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | corecount: 8
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | event service: False
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | sizes: {0: 2284307, 9: 2284569, 11: 2284597, 43030: 2328428, 43031: 2328427, 43039: 2337477, 43040: 2337661, 43078: 2337907}
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | --------------------------------------------------
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | 
[2025-11-27 06:14:41] 2025-11-27 11:13:33,424 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 06:14:41] 2025-11-27 11:13:33,509 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:14:41] 2025-11-27 11:13:33,510 | INFO     | job 6896577524 has completed (purged errors)
[2025-11-27 06:14:41] 2025-11-27 11:13:33,511 | INFO     | overall cleanup function is called
[2025-11-27 06:14:41] 2025-11-27 11:13:34,531 | INFO     | --- collectZombieJob: --- 10, [327897]
[2025-11-27 06:14:41] 2025-11-27 11:13:34,531 | INFO     | zombie collector waiting for pid 327897
[2025-11-27 06:14:41] 2025-11-27 11:13:34,531 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:14:41] 2025-11-27 11:13:34,532 | INFO     | collected zombie processes
[2025-11-27 06:14:41] 2025-11-27 11:13:34,532 | INFO     | will attempt to kill all subprocesses of pid=327897
[2025-11-27 06:14:41] 2025-11-27 11:13:35,658 | INFO     | process IDs to be killed: [327897] (in reverse order)
[2025-11-27 06:14:41] 2025-11-27 11:13:35,996 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:14:41] 2025-11-27 11:13:35,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:14:41] 2025-11-27 11:13:36,113 | INFO     | did not find any defunct processes belonging to 327897
[2025-11-27 06:14:41] 2025-11-27 11:13:36,158 | INFO     | did not find any defunct processes belonging to 327897
[2025-11-27 06:14:41] 2025-11-27 11:13:36,163 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:14:41] 2025-11-27 11:13:36,163 | INFO     | ready for new job
[2025-11-27 06:14:41] 2025-11-27 11:13:36,163 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:14:41] 2025-11-27 11:13:36,168 | INFO     | ***************************************
[2025-11-27 06:14:41] 2025-11-27 11:13:36,169 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:14:41] 2025-11-27 11:13:36,169 | INFO     | ***************************************
[2025-11-27 06:14:41] 2025-11-27 11:13:36,169 | INFO     | 
[2025-11-27 06:14:41] 2025-11-27 11:13:36,175 | INFO     | architecture information:
[2025-11-27 06:14:41] 2025-11-27 11:13:36,184 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:14:41] 2025-11-27 11:13:36,249 | INFO     | cat /etc/os-release:
[2025-11-27 06:14:41] NAME="CentOS Linux"
[2025-11-27 06:14:41] VERSION="7 (Core)"
[2025-11-27 06:14:41] ID="centos"
[2025-11-27 06:14:41] ID_LIKE="rhel fedora"
[2025-11-27 06:14:41] VERSION_ID="7"
[2025-11-27 06:14:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:14:41] ANSI_COLOR="0;31"
[2025-11-27 06:14:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:14:41] HOME_URL="https://www.centos.org/"
[2025-11-27 06:14:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:14:41] 
[2025-11-27 06:14:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:14:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:14:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:14:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:14:41] 
[2025-11-27 06:14:41] 2025-11-27 11:13:36,249 | INFO     | ***************************************
[2025-11-27 06:14:41] 2025-11-27 11:13:36,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | INFO     | sufficient remaining disk space (157537009664 B)
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | INFO     | update_server=False
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:14:41] 2025-11-27 11:13:36,803 | INFO     | aborting loop
[2025-11-27 06:14:41] 2025-11-27 11:13:37,043 | INFO     | all payload control threads have been joined
[2025-11-27 06:14:41] 2025-11-27 11:13:37,346 | INFO     | all job control threads have been joined
[2025-11-27 06:14:41] 2025-11-27 11:13:37,426 | INFO     | all data control threads have been joined
[2025-11-27 06:14:41] 2025-11-27 11:13:37,809 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:37,810 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:37,818 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:37,819 | INFO     | [job] validate thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:37,826 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:37,830 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,049 | INFO     | [payload] control thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,188 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,311 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:14:41] 2025-11-27 11:13:38,356 | INFO     | [job] control thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,434 | INFO     | [data] control thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:14:41] 2025-11-27 11:13:38,810 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:38,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:39,306 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:39,389 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:39,444 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:13:42,322 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:14:41] 2025-11-27 11:14:08,213 | INFO     | PID=297007 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 06:14:41] 2025-11-27 11:14:08,213 | INFO     | .. there are 31 such processes running
[2025-11-27 06:14:41] 2025-11-27 11:14:08,217 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:14:41] 2025-11-27 11:14:08,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:14:41] 2025-11-27 11:14:08,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:14:41] 2025-11-27 11:14:32,561 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:14:41] 2025-11-27 11:14:33,339 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140036529751872)>', '<ExcThread(monitor, started 140035663853312)>']
[2025-11-27 06:14:41] 2025-11-27 11:14:33,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:14:41] 2025-11-27 11:14:33,390 | INFO     | [monitor] control thread has ended
[2025-11-27 06:14:41] 2025-11-27 11:14:38,369 | INFO     | all workflow threads have been joined
[2025-11-27 06:14:41] 2025-11-27 11:14:38,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:14:41] 2025-11-27 11:14:38,370 | INFO     | traces error code: 0
[2025-11-27 06:14:41] 2025-11-27 11:14:38,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:14:41] 2025-11-27 11:14:39,385 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:14:41] 2025-11-27 11:14:39,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:14:41] 2025-11-27 11:14:39,459 [wrapper] pilotpid: 297007
[2025-11-27 06:14:41] 2025-11-27 11:14:39,484 [wrapper] Pilot exit status: 0
[2025-11-27 06:14:41] 2025-11-27 11:14:39,586 [wrapper] pandaids: 6896577524
[2025-11-27 06:14:41] 2025-11-27 11:14:39,849 [wrapper] cleanup supervisor_pilot 3431562 297008
[2025-11-27 06:14:41] 2025-11-27 11:14:39,862 [wrapper] Test setup, not cleaning
[2025-11-27 06:14:41] 2025-11-27 11:14:39,899 [wrapper] apfmon messages muted
[2025-11-27 06:14:41] 2025-11-27 11:14:39,919 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:14:41] 2025-11-27 11:14:39,932 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:14:41]  *** Error codes and diagnostics ***
[2025-11-27 06:14:41]     "exeErrorCode": 0,
[2025-11-27 06:14:41]     "exeErrorDiag": "",
[2025-11-27 06:14:41]     "pilotErrorCode": 0,
[2025-11-27 06:14:41]     "pilotErrorDiag": "",
[2025-11-27 06:14:41]  *** Listing of results directory ***
[2025-11-27 06:14:41] total 1316956
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 00:11 queuedata.json
[2025-11-27 06:14:41] -rwx------. 1 boincer umatlas     36292 Nov 25 00:12 runpilot2-wrapper.sh
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 00:12 pilot3.tar.gz
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:14:41] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:14 run_atlas
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:14 job.xml
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas 408892050 Nov 26 18:14 EVNT.47483658._003065.pool.root.1
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:14 start_atlas.sh
[2025-11-27 06:14:41] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:14 shared
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 18:14 input.tar.gz
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:14 boinc_lockfile
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      2782 Nov 26 18:14 pandaJob.out
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      2073 Nov 26 18:14 stderr.txt
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas        57 Nov 26 18:14 setup.sh.local
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas    991546 Nov 26 18:15 agis_schedconf.cvmfs.json
[2025-11-27 06:14:41] drwx------. 5 boincer umatlas      4096 Nov 26 18:15 pilot3
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:43 boinc_task_state.xml
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      7176 Nov 27 06:09 init_data.xml
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas 921042942 Nov 27 06:11 HITS.47556173._000471.pool.root.1
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas      1079 Nov 27 06:12 memory_monitor_summary.json
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas   1903412 Nov 27 06:12 log.47556173._000471.job.log.tgz.1
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas      7946 Nov 27 06:13 heartbeat.json
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas        95 Nov 27 06:14 pilot_heartbeat.json
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:14 wrapper_checkpoint.txt
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas      4824 Nov 27 06:14 pilotlog.txt
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas   5460810 Nov 27 06:14 log.47556173._000471.job.log.1
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas       353 Nov 27 06:14 output.list
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:14 runtime_log
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas   7383040 Nov 27 06:14 result.tar.gz
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 06:14 runtime_log.err
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas       666 Nov 27 06:14 JzRMDmhW0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm18LKDmprm9en.diag
[2025-11-27 06:14:41] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:14 boinc_mmap_file
[2025-11-27 06:14:41] HITS file was successfully produced:
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas 921042942 Nov 27 06:11 shared/HITS.pool.root.1
[2025-11-27 06:14:41]  *** Contents of shared directory: ***
[2025-11-27 06:14:41] total 1306584
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas 408892050 Nov 26 18:14 ATLAS.root_0
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:14 start_atlas.sh
[2025-11-27 06:14:41] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 18:14 input.tar.gz
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas 921042942 Nov 27 06:11 HITS.pool.root.1
[2025-11-27 06:14:41] -rw-------. 1 boincer umatlas   7383040 Nov 27 06:14 result.tar.gz
06:14:42 (282670): run_atlas exited; CPU time 140447.742061
06:14:42 (282670): called boinc_finish(0)

</stderr_txt>
]]>

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