Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:30 (2602092): wrapper (7.7.26015): starting
17:08:30 (2602092): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:08:30] Arguments: --nthreads 8
[2025-11-26 17:08:30] Threads: 8
[2025-11-26 17:08:30] Checking for CVMFS
[2025-11-26 17:08:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:08:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:08:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:08:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:08:30] 2.13.3.0 11772 30585 384568 153335 2 1113 26912123 32935937 51345 16776704 0 174706525 99.512 223926469 39024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:08:30] CVMFS is ok
[2025-11-26 17:08:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:08:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:08:30] Further information can be found at the LHC@home message board.
[2025-11-26 17:08:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:08:30] Checking for apptainer binary...
[2025-11-26 17:08:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:08:30] Running /usr/bin/apptainer --version
[2025-11-26 17:08:31] apptainer version 1.4.4-1.el9
[2025-11-26 17:08:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:08:31] c7-3-28.aglt2.org
[2025-11-26 17:08:31] apptainer works
[2025-11-26 17:08:31] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:08:31] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:08:31] Starting ATLAS job with PandaID=6892524027
[2025-11-26 17:08:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:01:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:01:25] 2025-11-27 12:00:51,586 | INFO     | sum of deviations: 1234234389126.917
[2025-11-27 07:01:25] 2025-11-27 12:00:51,586 | INFO     | mean x: 1764219876.0342298
[2025-11-27 07:01:25] 2025-11-27 12:00:51,586 | INFO     | mean y: 2909224.2530562347
[2025-11-27 07:01:25] 2025-11-27 12:00:51,586 | INFO     | intersect: -12826760049.41439
[2025-11-27 07:01:25] 2025-11-27 12:00:51,587 | INFO     | chi2: 6.8217862962860245
[2025-11-27 07:01:25] 2025-11-27 12:00:51,588 | INFO     | sum of square deviations: 166627587164.10593
[2025-11-27 07:01:25] 2025-11-27 12:00:51,605 | INFO     | sum of deviations: 1516473844646.4492
[2025-11-27 07:01:25] 2025-11-27 12:00:51,605 | INFO     | mean x: 1764219723.5375154
[2025-11-27 07:01:25] 2025-11-27 12:00:51,605 | INFO     | mean y: 2923144.8868388683
[2025-11-27 07:01:25] 2025-11-27 12:00:51,605 | INFO     | intersect: -16053200048.682104
[2025-11-27 07:01:25] 2025-11-27 12:00:51,610 | INFO     | chi2: 3.5425391746665302
[2025-11-27 07:01:25] 2025-11-27 12:00:51,610 | INFO     | current chi2=3.5425391746665302 (change=48.07021180661743 %)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,611 | INFO     | sum of square deviations: 163572258507.65247
[2025-11-27 07:01:25] 2025-11-27 12:00:51,628 | INFO     | sum of deviations: 1635593671010.785
[2025-11-27 07:01:25] 2025-11-27 12:00:51,628 | INFO     | mean x: 1764219571.0408416
[2025-11-27 07:01:25] 2025-11-27 12:00:51,628 | INFO     | mean y: 2929071.551980198
[2025-11-27 07:01:25] 2025-11-27 12:00:51,628 | INFO     | intersect: -17637876227.549313
[2025-11-27 07:01:25] 2025-11-27 12:00:51,629 | INFO     | chi2: 2.3844924305058255
[2025-11-27 07:01:25] 2025-11-27 12:00:51,629 | INFO     | current chi2=2.3844924305058255 (change=32.68973713663209 %)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,630 | INFO     | sum of square deviations: 160554363843.43445
[2025-11-27 07:01:25] 2025-11-27 12:00:51,642 | INFO     | sum of deviations: 1613783957200.1362
[2025-11-27 07:01:25] 2025-11-27 12:00:51,642 | INFO     | mean x: 1764219418.5404732
[2025-11-27 07:01:25] 2025-11-27 12:00:51,642 | INFO     | mean y: 2927969.488169365
[2025-11-27 07:01:25] 2025-11-27 12:00:51,643 | INFO     | intersect: -17729813305.59735
[2025-11-27 07:01:25] 2025-11-27 12:00:51,643 | INFO     | chi2: 2.382760512484759
[2025-11-27 07:01:25] 2025-11-27 12:00:51,643 | INFO     | current chi2=2.382760512484759 (change=0.0726325652750868 %)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,643 | INFO     | right removable region: 802
[2025-11-27 07:01:25] 2025-11-27 12:00:51,644 | INFO     | sum of square deviations: 166627320594.1059
[2025-11-27 07:01:25] 2025-11-27 12:00:51,652 | INFO     | sum of deviations: 1028564753942.8735
[2025-11-27 07:01:25] 2025-11-27 12:00:51,653 | INFO     | mean x: 1764220028.5375154
[2025-11-27 07:01:25] 2025-11-27 12:00:51,653 | INFO     | mean y: 2919344.135301353
[2025-11-27 07:01:25] 2025-11-27 12:00:51,653 | INFO     | intersect: -10887338826.516499
[2025-11-27 07:01:25] 2025-11-27 12:00:51,654 | INFO     | chi2: 4.8003295868980915
[2025-11-27 07:01:25] 2025-11-27 12:00:51,654 | INFO     | current chi2=4.8003295868980915 (change=29.632366386036924 %)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,655 | INFO     | sum of square deviations: 163571774838.73276
[2025-11-27 07:01:25] 2025-11-27 12:00:51,671 | INFO     | sum of deviations: 960592617785.3475
[2025-11-27 07:01:25] 2025-11-27 12:00:51,672 | INFO     | mean x: 1764220181.039604
[2025-11-27 07:01:25] 2025-11-27 12:00:51,672 | INFO     | mean y: 2922736.457920792
[2025-11-27 07:01:25] 2025-11-27 12:00:51,672 | INFO     | intersect: -10357647623.100712
[2025-11-27 07:01:25] 2025-11-27 12:00:51,673 | INFO     | chi2: 4.710459330079961
[2025-11-27 07:01:25] 2025-11-27 12:00:51,673 | INFO     | current chi2=4.710459330079961 (change=1.872168466586554 %)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,673 | INFO     | left removable region: 20
[2025-11-27 07:01:25] 2025-11-27 12:00:51,673 | INFO     | sum of square deviations: 148284204657.4336
[2025-11-27 07:01:25] 2025-11-27 12:00:51,689 | INFO     | sum of deviations: 1233787413973.2427
[2025-11-27 07:01:25] 2025-11-27 12:00:51,690 | INFO     | mean x: 1764219998.0447571
[2025-11-27 07:01:25] 2025-11-27 12:00:51,690 | INFO     | mean y: 2947211.2787723783
[2025-11-27 07:01:25] 2025-11-27 12:00:51,690 | INFO     | intersect: -14676110710.608944
[2025-11-27 07:01:25] 2025-11-27 12:00:51,691 | INFO     | chi2: 0.17681279217715293
[2025-11-27 07:01:25] 2025-11-27 12:00:51,691 | INFO     | current memory leak: 8.32 B/s (using 782 data points, chi2=0.18)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | could have reported an average CPU frequency of 3154 MHz (31 samples)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | ..............................
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . Timing measurements:
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . get job = 0 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . initial setup = 2 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . payload setup = 8 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . stage-in = 0 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . payload execution = 49883 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . stage-out = 3 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,692 | INFO     | . log creation = 0 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,693 | INFO     | ..............................
[2025-11-27 07:01:25] 2025-11-27 12:00:51,789 | INFO     | 
[2025-11-27 07:01:25] 2025-11-27 12:00:51,789 | INFO     | job summary report
[2025-11-27 07:01:25] 2025-11-27 12:00:51,789 | INFO     | --------------------------------------------------
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | PanDA job id: 6892524027
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | task id: 47493029
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | errors: (none)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | pilot state: finished 
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | transexitcode: 0
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | exeerrorcode: 0
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | exeerrordiag: 
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | exitcode: 0
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | exitmsg: OK
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | cpuconsumptiontime: 200913 s
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | nevents: 1000
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | neventsw: 0
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | pid: 2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | pgrp: 2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:51,790 | INFO     | corecount: 8
[2025-11-27 07:01:25] 2025-11-27 12:00:51,791 | INFO     | event service: False
[2025-11-27 07:01:25] 2025-11-27 12:00:51,792 | INFO     | sizes: {0: 2284073, 1: 2284328, 7: 2284590, 12: 2284618, 49896: 2332596, 49899: 2341590, 49902: 2341774, 49910: 2342020}
[2025-11-27 07:01:25] 2025-11-27 12:00:51,792 | INFO     | --------------------------------------------------
[2025-11-27 07:01:25] 2025-11-27 12:00:51,792 | INFO     | 
[2025-11-27 07:01:25] 2025-11-27 12:00:51,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 07:01:25] 2025-11-27 12:00:51,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,820 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,824 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:01:25] 2025-11-27 12:00:51,824 | INFO     | job 6892524027 has completed (purged errors)
[2025-11-27 07:01:25] 2025-11-27 12:00:51,824 | INFO     | overall cleanup function is called
[2025-11-27 07:01:25] 2025-11-27 12:00:52,162 | INFO     | PID=2606102 has CPU usage=18.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 07:01:25] 2025-11-27 12:00:52,162 | INFO     | .. there are 75 such processes running
[2025-11-27 07:01:25] 2025-11-27 12:00:52,852 | INFO     | --- collectZombieJob: --- 10, [2613785]
[2025-11-27 07:01:25] 2025-11-27 12:00:52,852 | INFO     | zombie collector waiting for pid 2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:52,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:01:25] 2025-11-27 12:00:52,852 | INFO     | collected zombie processes
[2025-11-27 07:01:25] 2025-11-27 12:00:52,852 | INFO     | will attempt to kill all subprocesses of pid=2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:53,465 | INFO     | process IDs to be killed: [2613785] (in reverse order)
[2025-11-27 07:01:25] 2025-11-27 12:00:53,704 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:01:25] 2025-11-27 12:00:53,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:01:25] 2025-11-27 12:00:53,737 | INFO     | did not find any defunct processes belonging to 2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:53,765 | INFO     | did not find any defunct processes belonging to 2613785
[2025-11-27 07:01:25] 2025-11-27 12:00:53,766 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:01:25] 2025-11-27 12:00:53,766 | INFO     | ready for new job
[2025-11-27 07:01:25] 2025-11-27 12:00:53,766 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:01:25] 2025-11-27 12:00:53,770 | INFO     | ***************************************
[2025-11-27 07:01:25] 2025-11-27 12:00:53,773 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:01:25] 2025-11-27 12:00:53,773 | INFO     | ***************************************
[2025-11-27 07:01:25] 2025-11-27 12:00:53,774 | INFO     | 
[2025-11-27 07:01:25] 2025-11-27 12:00:53,778 | INFO     | architecture information:
[2025-11-27 07:01:25] 2025-11-27 12:00:53,778 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:01:25] 2025-11-27 12:00:53,794 | INFO     | cat /etc/os-release:
[2025-11-27 07:01:25] NAME="CentOS Linux"
[2025-11-27 07:01:25] VERSION="7 (Core)"
[2025-11-27 07:01:25] ID="centos"
[2025-11-27 07:01:25] ID_LIKE="rhel fedora"
[2025-11-27 07:01:25] VERSION_ID="7"
[2025-11-27 07:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:01:25] ANSI_COLOR="0;31"
[2025-11-27 07:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:01:25] HOME_URL="https://www.centos.org/"
[2025-11-27 07:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:01:25] 
[2025-11-27 07:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:01:25] 
[2025-11-27 07:01:25] 2025-11-27 12:00:53,794 | INFO     | ***************************************
[2025-11-27 07:01:25] 2025-11-27 12:00:54,296 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 07:01:25] 2025-11-27 12:00:54,358 | INFO     | sufficient remaining disk space (68609376256 B)
[2025-11-27 07:01:25] 2025-11-27 12:00:54,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:01:25] 2025-11-27 12:00:54,359 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:01:25] 2025-11-27 12:00:54,359 | INFO     | update_server=False
[2025-11-27 07:01:25] 2025-11-27 12:00:54,359 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:01:25] 2025-11-27 12:00:54,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:01:25] 2025-11-27 12:00:54,681 | INFO     | all data control threads have been joined
[2025-11-27 07:01:25] 2025-11-27 12:00:54,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:01:25] 2025-11-27 12:00:54,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:25] 2025-11-27 12:00:54,834 | INFO     | aborting loop
[2025-11-27 07:01:25] 2025-11-27 12:00:54,956 | INFO     | all job control threads have been joined
[2025-11-27 07:01:25] 2025-11-27 12:00:55,365 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:55,520 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:55,634 | INFO     | all payload control threads have been joined
[2025-11-27 07:01:25] 2025-11-27 12:00:55,686 | INFO     | [data] control thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:55,840 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:55,962 | INFO     | [job] control thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,157 | INFO     | [job] validate thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,366 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,432 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,568 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,640 | INFO     | [payload] control thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,698 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,738 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:56,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:25] 2025-11-27 12:00:56,858 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:57,806 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:00:58,842 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:01:05,146 | INFO     | job.realtimelogging is not enabled
[2025-11-27 07:01:25] 2025-11-27 12:01:06,151 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:01:25] 2025-11-27 12:01:14,115 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:01:25] 2025-11-27 12:01:14,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668125759296)>', '<ExcThread(monitor, started 139667496232704)>']
[2025-11-27 07:01:25] 2025-11-27 12:01:19,973 | INFO     | all workflow threads have been joined
[2025-11-27 07:01:25] 2025-11-27 12:01:19,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:01:25] 2025-11-27 12:01:19,973 | INFO     | traces error code: 0
[2025-11-27 07:01:25] 2025-11-27 12:01:19,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | INFO     | PID=2606102 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | INFO     | .. there are 75 such processes running
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:01:25] 2025-11-27 12:01:25,125 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:01:25] 2025-11-27 12:01:25,126 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 07:01:25] 2025-11-27 12:01:25,126 | INFO     | [monitor] control thread has ended
[2025-11-27 07:01:25] 2025-11-27 12:01:25,271 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:01:25] 2025-11-27 12:01:25,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:01:25] 2025-11-27 12:01:25,276 [wrapper] pilotpid: 2606102
[2025-11-27 07:01:25] 2025-11-27 12:01:25,278 [wrapper] Pilot exit status: 0
[2025-11-27 07:01:25] 2025-11-27 12:01:25,290 [wrapper] pandaids: 6892524027
[2025-11-27 07:01:25] 2025-11-27 12:01:25,443 [wrapper] cleanup supervisor_pilot 3408139 2606103
[2025-11-27 07:01:25] 2025-11-27 12:01:25,446 [wrapper] Test setup, not cleaning
[2025-11-27 07:01:25] 2025-11-27 12:01:25,449 [wrapper] apfmon messages muted
[2025-11-27 07:01:25] 2025-11-27 12:01:25,454 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:01:25] 2025-11-27 12:01:25,457 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:01:25]  *** Error codes and diagnostics ***
[2025-11-27 07:01:25]     "exeErrorCode": 0,
[2025-11-27 07:01:25]     "exeErrorDiag": "",
[2025-11-27 07:01:25]     "pilotErrorCode": 0,
[2025-11-27 07:01:25]     "pilotErrorDiag": "",
[2025-11-27 07:01:25]  *** Listing of results directory ***
[2025-11-27 07:01:25] total 1320928
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:04 queuedata.json
[2025-11-27 07:01:25] -rwx------. 1 boincer umatlas     36292 Nov 19 02:05 runpilot2-wrapper.sh
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:01:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:08 run_atlas
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:08 job.xml
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas 408903717 Nov 26 17:08 EVNT.47493027._000083.pool.root.1
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:08 start_atlas.sh
[2025-11-27 07:01:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:08 shared
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 17:08 input.tar.gz
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:08 boinc_lockfile
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas      2771 Nov 26 17:08 pandaJob.out
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas    991538 Nov 26 17:08 agis_schedconf.cvmfs.json
[2025-11-27 07:01:25] drwx------. 5 boincer umatlas      4096 Nov 26 17:08 pilot3
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:50 boinc_task_state.xml
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 06:58 init_data.xml
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas 923798853 Nov 27 07:00 HITS.47493029._000787.pool.root.1
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas        95 Nov 27 07:00 pilot_heartbeat.json
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas      1070 Nov 27 07:00 memory_monitor_summary.json
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas   1992081 Nov 27 07:00 log.47493029._000787.job.log.tgz.1
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas      8635 Nov 27 07:00 heartbeat.json
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas        29 Nov 27 07:01 wrapper_checkpoint.txt
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:01 boinc_mmap_file
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas       893 Nov 27 07:01 pilotlog.txt
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas   6012718 Nov 27 07:01 log.47493029._000787.job.log.1
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas       353 Nov 27 07:01 output.list
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:01 runtime_log
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas   8028160 Nov 27 07:01 result.tar.gz
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas       663 Nov 27 07:01 y7rNDmLRrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxdGKDm7dyJnn.diag
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 07:01 runtime_log.err
[2025-11-27 07:01:25] -rw-r--r--. 1 boincer umatlas     21253 Nov 27 07:01 stderr.txt
[2025-11-27 07:01:25] HITS file was successfully produced:
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas 923798853 Nov 27 07:00 shared/HITS.pool.root.1
[2025-11-27 07:01:25]  *** Contents of shared directory: ***
[2025-11-27 07:01:25] total 1309916
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas 408903717 Nov 26 17:08 ATLAS.root_0
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:08 start_atlas.sh
[2025-11-27 07:01:25] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 17:08 input.tar.gz
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas 923798853 Nov 27 07:00 HITS.pool.root.1
[2025-11-27 07:01:25] -rw-------. 1 boincer umatlas   8028160 Nov 27 07:01 result.tar.gz
07:01:27 (2602092): run_atlas exited; CPU time 202262.514513
07:01:27 (2602092): called boinc_finish(0)

</stderr_txt>
]]>

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