Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:40:55 (3635090): wrapper (7.7.26015): starting
19:40:55 (3635090): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 19:40:55] Arguments: --nthreads 10
[2025-11-26 19:40:55] Threads: 10
[2025-11-26 19:40:55] Checking for CVMFS
[2025-11-26 19:40:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:40:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:40:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:40:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:40:56] 2.13.3.0 9456 30783 345952 153341 0 373 19401514 32935937 22335 16776704 0 100913963 99.406 150331799 40510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:40:56] CVMFS is ok
[2025-11-26 19:40:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:40:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:40:56] Further information can be found at the LHC@home message board.
[2025-11-26 19:40:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:40:56] Checking for apptainer binary...
[2025-11-26 19:40:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:40:56] Running /usr/bin/apptainer --version
[2025-11-26 19:40:56] apptainer version 1.4.4-1.el9
[2025-11-26 19:40:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:40:56] c6-5-7-2.aglt2.org
[2025-11-26 19:40:56] apptainer works
[2025-11-26 19:40:56] Set ATHENA_PROC_NUMBER=10
[2025-11-26 19:40:56] Set ATHENA_CORE_NUMBER=10
[2025-11-26 19:40:56] Starting ATLAS job with PandaID=6896556891
[2025-11-26 19:40:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:22:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:22:09] 2025-11-27 17:20:58,727 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:22:09] 2025-11-27 17:20:58,727 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:22:09] 2025-11-27 17:20:58,746 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:22:09] 2025-11-27 17:20:58,747 | INFO     | sum of square deviations: 294543560047.27
[2025-11-27 12:22:09] 2025-11-27 17:20:58,770 | INFO     | sum of deviations: 1645095864207.3918
[2025-11-27 12:22:09] 2025-11-27 17:20:58,770 | INFO     | mean x: 1764234065.3967447
[2025-11-27 12:22:09] 2025-11-27 17:20:58,770 | INFO     | mean y: 3272878.7477110885
[2025-11-27 12:22:09] 2025-11-27 17:20:58,771 | INFO     | intersect: -9850394144.263062
[2025-11-27 12:22:09] 2025-11-27 17:20:58,772 | INFO     | chi2: 13.372901198075343
[2025-11-27 12:22:09] 2025-11-27 17:20:58,774 | INFO     | sum of square deviations: 290072650570.90045
[2025-11-27 12:22:09] 2025-11-27 17:20:58,804 | INFO     | sum of deviations: 2035687707686.0652
[2025-11-27 12:22:09] 2025-11-27 17:20:58,804 | INFO     | mean x: 1764233912.908998
[2025-11-27 12:22:09] 2025-11-27 17:20:58,804 | INFO     | mean y: 3286197.731083845
[2025-11-27 12:22:09] 2025-11-27 17:20:58,804 | INFO     | intersect: -12377851020.560055
[2025-11-27 12:22:09] 2025-11-27 17:20:58,805 | INFO     | chi2: 9.811346526274846
[2025-11-27 12:22:09] 2025-11-27 17:20:58,806 | INFO     | current chi2=9.811346526274846 (change=26.632625329745828 %)
[2025-11-27 12:22:09] 2025-11-27 17:20:58,807 | INFO     | sum of square deviations: 285647230319.2338
[2025-11-27 12:22:09] 2025-11-27 17:20:58,839 | INFO     | sum of deviations: 2438892106139.872
[2025-11-27 12:22:09] 2025-11-27 17:20:58,841 | INFO     | mean x: 1764233760.4213772
[2025-11-27 12:22:09] 2025-11-27 17:20:58,842 | INFO     | mean y: 3300091.390544707
[2025-11-27 12:22:09] 2025-11-27 17:20:58,842 | INFO     | intersect: -15059950432.230707
[2025-11-27 12:22:09] 2025-11-27 17:20:58,843 | INFO     | chi2: 6.124585370443592
[2025-11-27 12:22:09] 2025-11-27 17:20:58,843 | INFO     | current chi2=6.124585370443592 (change=37.57650538545433 %)
[2025-11-27 12:22:09] 2025-11-27 17:20:58,844 | INFO     | sum of square deviations: 281267066729.76874
[2025-11-27 12:22:09] 2025-11-27 17:20:58,879 | INFO     | sum of deviations: 2775807445997.937
[2025-11-27 12:22:09] 2025-11-27 17:20:58,879 | INFO     | mean x: 1764233607.9338844
[2025-11-27 12:22:09] 2025-11-27 17:20:58,879 | INFO     | mean y: 3311811.3584710746
[2025-11-27 12:22:09] 2025-11-27 17:20:58,880 | INFO     | intersect: -17407801556.164604
[2025-11-27 12:22:09] 2025-11-27 17:20:58,885 | INFO     | chi2: 3.3104256095691293
[2025-11-27 12:22:09] 2025-11-27 17:20:58,885 | INFO     | current chi2=3.3104256095691293 (change=45.94857595512035 %)
[2025-11-27 12:22:09] 2025-11-27 17:20:58,886 | INFO     | sum of square deviations: 276931868439.8877
[2025-11-27 12:22:09] 2025-11-27 17:20:58,918 | INFO     | sum of deviations: 2922317110236.1826
[2025-11-27 12:22:09] 2025-11-27 17:20:58,918 | INFO     | mean x: 1764233455.445483
[2025-11-27 12:22:09] 2025-11-27 17:20:58,918 | INFO     | mean y: 3316962.7082035304
[2025-11-27 12:22:09] 2025-11-27 17:20:58,919 | INFO     | intersect: -18613715603.258656
[2025-11-27 12:22:09] 2025-11-27 17:20:58,920 | INFO     | chi2: 2.661903621454354
[2025-11-27 12:22:09] 2025-11-27 17:20:58,920 | INFO     | current chi2=2.661903621454354 (change=19.59029033125394 %)
[2025-11-27 12:22:09] 2025-11-27 17:20:58,920 | INFO     | right removable region: 962
[2025-11-27 12:22:09] 2025-11-27 17:20:58,925 | INFO     | sum of square deviations: 290071273133.7174
[2025-11-27 12:22:09] 2025-11-27 17:20:58,958 | INFO     | sum of deviations: 1326191749376.4487
[2025-11-27 12:22:09] 2025-11-27 17:20:58,959 | INFO     | mean x: 1764234217.9079754
[2025-11-27 12:22:09] 2025-11-27 17:20:58,959 | INFO     | mean y: 3283740.6605316973
[2025-11-27 12:22:09] 2025-11-27 17:20:58,959 | INFO     | intersect: -8062709277.126532
[2025-11-27 12:22:09] 2025-11-27 17:20:58,960 | INFO     | chi2: 11.040964258917107
[2025-11-27 12:22:09] 2025-11-27 17:20:58,960 | INFO     | current chi2=11.040964258917107 (change=17.437778868012977 %)
[2025-11-27 12:22:09] 2025-11-27 17:20:58,960 | INFO     | left removable region: 10
[2025-11-27 12:22:09] 2025-11-27 17:20:58,965 | INFO     | sum of square deviations: 267549261059.99023
[2025-11-27 12:22:09] 2025-11-27 17:20:58,993 | INFO     | sum of deviations: 2538248954701.312
[2025-11-27 12:22:09] 2025-11-27 17:20:58,997 | INFO     | mean x: 1764233729.967437
[2025-11-27 12:22:09] 2025-11-27 17:20:58,998 | INFO     | mean y: 3331404.300420168
[2025-11-27 12:22:09] 2025-11-27 17:20:58,998 | INFO     | intersect: -16734014096.85036
[2025-11-27 12:22:09] 2025-11-27 17:20:58,999 | INFO     | chi2: 0.1872079894239935
[2025-11-27 12:22:09] 2025-11-27 17:20:58,999 | INFO     | current memory leak: 9.49 B/s (using 952 data points, chi2=0.19)
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | could have reported an average CPU frequency of 2942 MHz (36 samples)
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | ..............................
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . Timing measurements:
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . get job = 0 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . initial setup = 3 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . payload setup = 11 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . stage-in = 0 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . payload execution = 59911 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,000 | INFO     | . stage-out = 8 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,001 | INFO     | . log creation = 2 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,001 | INFO     | ..............................
[2025-11-27 12:22:09] 2025-11-27 17:20:59,165 | INFO     | 
[2025-11-27 12:22:09] 2025-11-27 17:20:59,165 | INFO     | job summary report
[2025-11-27 12:22:09] 2025-11-27 17:20:59,165 | INFO     | --------------------------------------------------
[2025-11-27 12:22:09] 2025-11-27 17:20:59,165 | INFO     | PanDA job id: 6896556891
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | task id: 47556173
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | errors: (none)
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | pilot state: finished 
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | transexitcode: 0
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | exeerrorcode: 0
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | exeerrordiag: 
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | exitcode: 0
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | exitmsg: OK
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | cpuconsumptiontime: 228498 s
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | nevents: 1000
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | neventsw: 0
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | pid: 3645784
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | pgrp: 3645784
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | corecount: 10
[2025-11-27 12:22:09] 2025-11-27 17:20:59,166 | INFO     | event service: False
[2025-11-27 12:22:09] 2025-11-27 17:20:59,167 | INFO     | sizes: {0: 2284198, 1: 2284340, 8: 2284602, 11: 2284630, 59925: 2336993, 59926: 2336992, 59935: 2346226, 59966: 2346416}
[2025-11-27 12:22:09] 2025-11-27 17:20:59,167 | INFO     | --------------------------------------------------
[2025-11-27 12:22:09] 2025-11-27 17:20:59,167 | INFO     | 
[2025-11-27 12:22:09] 2025-11-27 17:20:59,167 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | job 6896556891 has completed (purged errors)
[2025-11-27 12:22:09] 2025-11-27 17:20:59,260 | INFO     | overall cleanup function is called
[2025-11-27 12:22:09] 2025-11-27 17:21:00,287 | INFO     | --- collectZombieJob: --- 10, [3645784]
[2025-11-27 12:22:09] 2025-11-27 17:21:00,287 | INFO     | zombie collector waiting for pid 3645784
[2025-11-27 12:22:09] 2025-11-27 17:21:00,288 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:22:09] 2025-11-27 17:21:00,288 | INFO     | collected zombie processes
[2025-11-27 12:22:09] 2025-11-27 17:21:00,288 | INFO     | will attempt to kill all subprocesses of pid=3645784
[2025-11-27 12:22:09] 2025-11-27 17:21:01,369 | INFO     | process IDs to be killed: [3645784] (in reverse order)
[2025-11-27 12:22:09] 2025-11-27 17:21:01,532 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:22:09] 2025-11-27 17:21:01,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:22:09] 2025-11-27 17:21:01,552 | INFO     | did not find any defunct processes belonging to 3645784
[2025-11-27 12:22:09] 2025-11-27 17:21:01,569 | INFO     | did not find any defunct processes belonging to 3645784
[2025-11-27 12:22:09] 2025-11-27 17:21:01,573 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:22:09] 2025-11-27 17:21:01,573 | INFO     | ready for new job
[2025-11-27 12:22:09] 2025-11-27 17:21:01,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:22:09] 2025-11-27 17:21:01,578 | INFO     | ***************************************
[2025-11-27 12:22:09] 2025-11-27 17:21:01,578 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:22:09] 2025-11-27 17:21:01,578 | INFO     | ***************************************
[2025-11-27 12:22:09] 2025-11-27 17:21:01,578 | INFO     | 
[2025-11-27 12:22:09] 2025-11-27 17:21:01,582 | INFO     | architecture information:
[2025-11-27 12:22:09] 2025-11-27 17:21:01,584 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:22:09] 2025-11-27 17:21:01,692 | INFO     | cat /etc/os-release:
[2025-11-27 12:22:09] NAME="CentOS Linux"
[2025-11-27 12:22:09] VERSION="7 (Core)"
[2025-11-27 12:22:09] ID="centos"
[2025-11-27 12:22:09] ID_LIKE="rhel fedora"
[2025-11-27 12:22:09] VERSION_ID="7"
[2025-11-27 12:22:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:22:09] ANSI_COLOR="0;31"
[2025-11-27 12:22:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:22:09] HOME_URL="https://www.centos.org/"
[2025-11-27 12:22:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:22:09] 
[2025-11-27 12:22:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:22:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:22:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:22:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:22:09] 
[2025-11-27 12:22:09] 2025-11-27 17:21:01,694 | INFO     | ***************************************
[2025-11-27 12:22:09] 2025-11-27 17:21:02,198 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 12:22:09] 2025-11-27 17:21:02,446 | INFO     | sufficient remaining disk space (67573383168 B)
[2025-11-27 12:22:09] 2025-11-27 17:21:02,447 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:22:09] 2025-11-27 17:21:02,447 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:22:09] 2025-11-27 17:21:02,447 | INFO     | update_server=False
[2025-11-27 12:22:09] 2025-11-27 17:21:02,447 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:22:09] 2025-11-27 17:21:02,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:22:09] 2025-11-27 17:21:02,448 | INFO     | aborting loop
[2025-11-27 12:22:09] 2025-11-27 17:21:02,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:22:09] 2025-11-27 17:21:02,651 | INFO     | all job control threads have been joined
[2025-11-27 12:22:09] 2025-11-27 17:21:03,247 | INFO     | all data control threads have been joined
[2025-11-27 12:22:09] 2025-11-27 17:21:03,384 | INFO     | all payload control threads have been joined
[2025-11-27 12:22:09] 2025-11-27 17:21:03,451 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:03,454 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:03,477 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:03,629 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:03,657 | INFO     | [job] control thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:03,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:22:09] 2025-11-27 17:21:03,894 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,010 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,011 | INFO     | [job] validate thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,187 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:22:09] 2025-11-27 17:21:04,270 | INFO     | [data] control thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,390 | INFO     | [payload] control thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,739 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:04,979 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:05,193 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:05,834 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:06,490 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:22:09] 2025-11-27 17:21:31,497 | INFO     | PID=3638807 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:22:09] 2025-11-27 17:21:31,497 | INFO     | .. there are 33 such processes running
[2025-11-27 12:22:09] 2025-11-27 17:21:31,498 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:22:09] 2025-11-27 17:21:31,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:22:09] 2025-11-27 17:21:31,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:22:09] 2025-11-27 17:22:01,545 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:22:09] 2025-11-27 17:22:03,536 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140513516037952)>', '<ExcThread(monitor, started 140513168566016)>']
[2025-11-27 12:22:09] 2025-11-27 17:22:03,729 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:22:09] 2025-11-27 17:22:03,729 | INFO     | [monitor] control thread has ended
[2025-11-27 12:22:09] 2025-11-27 17:22:08,561 | INFO     | all workflow threads have been joined
[2025-11-27 12:22:09] 2025-11-27 17:22:08,562 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:22:09] 2025-11-27 17:22:08,562 | INFO     | traces error code: 0
[2025-11-27 12:22:09] 2025-11-27 17:22:08,562 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:22:09] 2025-11-27 17:22:08,818 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:22:09] 2025-11-27 17:22:08,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:22:09] 2025-11-27 17:22:08,856 [wrapper] pilotpid: 3638807
[2025-11-27 12:22:09] 2025-11-27 17:22:08,902 [wrapper] Pilot exit status: 0
[2025-11-27 12:22:09] 2025-11-27 17:22:09,030 [wrapper] pandaids: 6896556891
[2025-11-27 12:22:09] 2025-11-27 17:22:09,176 [wrapper] cleanup supervisor_pilot 2680172 3638808
[2025-11-27 12:22:09] 2025-11-27 17:22:09,191 [wrapper] Test setup, not cleaning
[2025-11-27 12:22:09] 2025-11-27 17:22:09,208 [wrapper] apfmon messages muted
[2025-11-27 12:22:09] 2025-11-27 17:22:09,223 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:22:09] 2025-11-27 17:22:09,242 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:22:09]  *** Error codes and diagnostics ***
[2025-11-27 12:22:09]     "exeErrorCode": 0,
[2025-11-27 12:22:09]     "exeErrorDiag": "",
[2025-11-27 12:22:09]     "pilotErrorCode": 0,
[2025-11-27 12:22:09]     "pilotErrorDiag": "",
[2025-11-27 12:22:09]  *** Listing of results directory ***
[2025-11-27 12:22:09] total 1312756
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-27 12:22:09] -rwx------. 1 boincer umatlas     36292 Nov 24 23:55 runpilot2-wrapper.sh
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 23:55 queuedata.json
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:22:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:40 run_atlas
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:40 job.xml
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas 411356478 Nov 26 19:40 EVNT.47483658._003062.pool.root.1
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:40 start_atlas.sh
[2025-11-27 12:22:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:40 shared
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:40 input.tar.gz
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:40 boinc_lockfile
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 19:40 pandaJob.out
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas        57 Nov 26 19:40 setup.sh.local
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas    991546 Nov 26 19:41 agis_schedconf.cvmfs.json
[2025-11-27 12:22:09] drwx------. 5 boincer umatlas      4096 Nov 26 19:41 pilot3
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 11:56 boinc_task_state.xml
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas 909086701 Nov 27 12:19 HITS.47556173._000445.pool.root.1
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas      1058 Nov 27 12:20 memory_monitor_summary.json
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas   2343526 Nov 27 12:20 log.47556173._000445.job.log.tgz.1
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas      8618 Nov 27 12:20 heartbeat.json
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas        95 Nov 27 12:21 pilot_heartbeat.json
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 12:21 init_data.xml
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:22 boinc_mmap_file
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:22 wrapper_checkpoint.txt
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas      4824 Nov 27 12:22 pilotlog.txt
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas   7613967 Nov 27 12:22 log.47556173._000445.job.log.1
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas       353 Nov 27 12:22 output.list
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:22 runtime_log
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas   9973760 Nov 27 12:22 result.tar.gz
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas      9345 Nov 27 12:22 runtime_log.err
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas       660 Nov 27 12:22 cwXNDmeG0h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM8LKDmOIYbXn.diag
[2025-11-27 12:22:09] -rw-r--r--. 1 boincer umatlas     12024 Nov 27 12:22 stderr.txt
[2025-11-27 12:22:09] HITS file was successfully produced:
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas 909086701 Nov 27 12:19 shared/HITS.pool.root.1
[2025-11-27 12:22:09]  *** Contents of shared directory: ***
[2025-11-27 12:22:09] total 1299840
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas 411356478 Nov 26 19:40 ATLAS.root_0
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:40 start_atlas.sh
[2025-11-27 12:22:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:40 input.tar.gz
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas 909086701 Nov 27 12:19 HITS.pool.root.1
[2025-11-27 12:22:09] -rw-------. 1 boincer umatlas   9973760 Nov 27 12:22 result.tar.gz
12:22:11 (3635090): run_atlas exited; CPU time 229979.161173
12:22:11 (3635090): called boinc_finish(0)

</stderr_txt>
]]>

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