Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:30 (2649826): wrapper (7.7.26015): starting
17:11:30 (2649826): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:11:30] Arguments: --nthreads 8
[2025-11-26 17:11:30] Threads: 8
[2025-11-26 17:11:30] Checking for CVMFS
[2025-11-26 17:11:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:11:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:11:31] 2.13.3.0 11772 30588 374916 153335 3 1114 26945357 32935936 52060 16776704 0 174834750 99.512 223958321 39028 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:11:31] CVMFS is ok
[2025-11-26 17:11:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:11:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:11:31] Further information can be found at the LHC@home message board.
[2025-11-26 17:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:11:31] Checking for apptainer binary...
[2025-11-26 17:11:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:11:31] Running /usr/bin/apptainer --version
[2025-11-26 17:11:31] apptainer version 1.4.4-1.el9
[2025-11-26 17:11:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:11:31] c7-3-28.aglt2.org
[2025-11-26 17:11:31] apptainer works
[2025-11-26 17:11:31] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:11:31] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:11:31] Starting ATLAS job with PandaID=6892543954
[2025-11-26 17:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:29:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:29:20] 2025-11-27 11:28:32,776 | INFO     | time since job start (47801s) is within the limit (172800.0s)
[2025-11-27 06:29:20] 2025-11-27 11:28:33,052 | INFO     | monitor loop #3003: job 0:6892543954 is in state 'finished'
[2025-11-27 06:29:20] 2025-11-27 11:28:33,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:29:20] 2025-11-27 11:28:34,784 | INFO     | time since job start (47803s) is within the limit (172800.0s)
[2025-11-27 06:29:20] 2025-11-27 11:28:35,556 | INFO     | monitor loop #3004: job 0:6892543954 is in state 'finished'
[2025-11-27 06:29:20] 2025-11-27 11:28:35,556 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:29:20] 2025-11-27 11:28:36,792 | INFO     | time since job start (47805s) is within the limit (172800.0s)
[2025-11-27 06:29:20] 2025-11-27 11:28:38,063 | INFO     | monitor loop #3005: job 0:6892543954 is in state 'finished'
[2025-11-27 06:29:20] 2025-11-27 11:28:38,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:29:20] 2025-11-27 11:28:40,151 | INFO     | PID=2655420 has CPU usage=18.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 06:29:20] 2025-11-27 11:28:40,151 | INFO     | .. there are 75 such processes running
[2025-11-27 06:29:20] 2025-11-27 11:28:40,591 | INFO     | monitor loop #3006: job 0:6892543954 is in state 'finished'
[2025-11-27 06:29:20] 2025-11-27 11:28:40,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:29:20] 2025-11-27 11:28:41,152 | INFO     | time since job start (47810s) is within the limit (172800.0s)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,088 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:29:20] 2025-11-27 11:28:43,096 | INFO     | monitor loop #3007: job 0:6892543954 is in state 'finished'
[2025-11-27 06:29:20] 2025-11-27 11:28:43,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,113 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3183.1841770833344
[2025-11-27 06:29:20] 2025-11-27 11:28:43,152 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6892543954/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,153 | INFO     | extracted standard info from prmon json
[2025-11-27 06:29:20] 2025-11-27 11:28:43,153 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:29:20] 2025-11-27 11:28:43,153 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:29:20] 2025-11-27 11:28:43,164 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:29:20] 2025-11-27 11:28:43,165 | INFO     | sum of square deviations: 148857118209.06757
[2025-11-27 06:29:20] 2025-11-27 11:28:43,173 | INFO     | time since job start (47812s) is within the limit (172800.0s)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,178 | INFO     | sum of deviations: 5177685189385.113
[2025-11-27 06:29:20] 2025-11-27 11:28:43,178 | INFO     | mean x: 1764219003.8288634
[2025-11-27 06:29:20] 2025-11-27 11:28:43,178 | INFO     | mean y: 4882657.269476373
[2025-11-27 06:29:20] 2025-11-27 11:28:43,178 | INFO     | intersect: -61359805285.48042
[2025-11-27 06:29:20] 2025-11-27 11:28:43,179 | INFO     | chi2: 25.492711906479578
[2025-11-27 06:29:20] 2025-11-27 11:28:43,180 | INFO     | sum of square deviations: 146024097174.73666
[2025-11-27 06:29:20] 2025-11-27 11:28:43,191 | INFO     | sum of deviations: 5642839189634.784
[2025-11-27 06:29:20] 2025-11-27 11:28:43,191 | INFO     | mean x: 1764218851.340617
[2025-11-27 06:29:20] 2025-11-27 11:28:43,191 | INFO     | mean y: 4907680.861182519
[2025-11-27 06:29:20] 2025-11-27 11:28:43,191 | INFO     | intersect: -68170163872.73734
[2025-11-27 06:29:20] 2025-11-27 11:28:43,192 | INFO     | chi2: 21.890504722960053
[2025-11-27 06:29:20] 2025-11-27 11:28:43,192 | INFO     | current chi2=21.890504722960053 (change=14.130341239230567 %)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,192 | INFO     | right removable region: 777
[2025-11-27 06:29:20] 2025-11-27 11:28:43,193 | INFO     | sum of square deviations: 146023271176.41623
[2025-11-27 06:29:20] 2025-11-27 11:28:43,207 | INFO     | sum of deviations: 4710177971162.844
[2025-11-27 06:29:20] 2025-11-27 11:28:43,207 | INFO     | mean x: 1764219156.3393316
[2025-11-27 06:29:20] 2025-11-27 11:28:43,207 | INFO     | mean y: 4907800.746786633
[2025-11-27 06:29:20] 2025-11-27 11:28:43,207 | INFO     | intersect: -56902365536.895744
[2025-11-27 06:29:20] 2025-11-27 11:28:43,216 | INFO     | chi2: 22.134688562670647
[2025-11-27 06:29:20] 2025-11-27 11:28:43,216 | INFO     | current chi2=22.134688562670647 (change=13.172483791163112 %)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,216 | INFO     | left removable region: 10
[2025-11-27 06:29:20] 2025-11-27 11:28:43,217 | INFO     | sum of square deviations: 139917036616.79288
[2025-11-27 06:29:20] 2025-11-27 11:28:43,253 | INFO     | sum of deviations: 4919477592070.658
[2025-11-27 06:29:20] 2025-11-27 11:28:43,253 | INFO     | mean x: 1764219125.8591917
[2025-11-27 06:29:20] 2025-11-27 11:28:43,253 | INFO     | mean y: 4952065.033898305
[2025-11-27 06:29:20] 2025-11-27 11:28:43,253 | INFO     | intersect: -62024924117.50039
[2025-11-27 06:29:20] 2025-11-27 11:28:43,254 | INFO     | chi2: 17.293135233442346
[2025-11-27 06:29:20] 2025-11-27 11:28:43,254 | INFO     | current memory leak: 35.16 B/s (using 767 data points, chi2=17.29)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,255 | INFO     | could have reported an average CPU frequency of 3142 MHz (30 samples)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,255 | INFO     | ..............................
[2025-11-27 06:29:20] 2025-11-27 11:28:43,255 | INFO     | . Timing measurements:
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . get job = 0 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . initial setup = 3 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . payload setup = 11 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . stage-in = 0 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . payload execution = 47755 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . stage-out = 5 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | . log creation = 1 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,256 | INFO     | ..............................
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | 
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | job summary report
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | --------------------------------------------------
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | PanDA job id: 6892543954
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | task id: 47493029
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | errors: (none)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,785 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | pilot state: finished 
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | transexitcode: 0
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | exeerrorcode: 0
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | exeerrordiag: 
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | exitcode: 0
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | exitmsg: OK
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | cpuconsumptiontime: 202486 s
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | nevents: 1000
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | neventsw: 0
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | pid: 2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | pgrp: 2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | corecount: 8
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | event service: False
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | sizes: {0: 2284303, 1: 2284303, 9: 2284593, 11: 2284621, 47770: 2332605, 47776: 2341599, 47779: 2341783, 47791: 2342029}
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | --------------------------------------------------
[2025-11-27 06:29:20] 2025-11-27 11:28:43,786 | INFO     | 
[2025-11-27 06:29:20] 2025-11-27 11:28:43,787 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 06:29:20] 2025-11-27 11:28:43,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,858 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | job 6892543954 has completed (purged errors)
[2025-11-27 06:29:20] 2025-11-27 11:28:43,859 | INFO     | overall cleanup function is called
[2025-11-27 06:29:20] 2025-11-27 11:28:44,894 | INFO     | --- collectZombieJob: --- 10, [2664367]
[2025-11-27 06:29:20] 2025-11-27 11:28:44,894 | INFO     | zombie collector waiting for pid 2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:44,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:29:20] 2025-11-27 11:28:44,894 | INFO     | collected zombie processes
[2025-11-27 06:29:20] 2025-11-27 11:28:44,894 | INFO     | will attempt to kill all subprocesses of pid=2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:46,046 | INFO     | process IDs to be killed: [2664367] (in reverse order)
[2025-11-27 06:29:20] 2025-11-27 11:28:46,315 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:29:20] 2025-11-27 11:28:46,315 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:29:20] 2025-11-27 11:28:46,357 | INFO     | did not find any defunct processes belonging to 2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:46,387 | INFO     | did not find any defunct processes belonging to 2664367
[2025-11-27 06:29:20] 2025-11-27 11:28:46,389 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:29:20] 2025-11-27 11:28:46,389 | INFO     | ready for new job
[2025-11-27 06:29:20] 2025-11-27 11:28:46,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:29:20] 2025-11-27 11:28:46,392 | INFO     | ***************************************
[2025-11-27 06:29:20] 2025-11-27 11:28:46,393 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:29:20] 2025-11-27 11:28:46,393 | INFO     | ***************************************
[2025-11-27 06:29:20] 2025-11-27 11:28:46,393 | INFO     | 
[2025-11-27 06:29:20] 2025-11-27 11:28:46,398 | INFO     | architecture information:
[2025-11-27 06:29:20] 2025-11-27 11:28:46,403 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:29:20] 2025-11-27 11:28:46,426 | INFO     | cat /etc/os-release:
[2025-11-27 06:29:20] NAME="CentOS Linux"
[2025-11-27 06:29:20] VERSION="7 (Core)"
[2025-11-27 06:29:20] ID="centos"
[2025-11-27 06:29:20] ID_LIKE="rhel fedora"
[2025-11-27 06:29:20] VERSION_ID="7"
[2025-11-27 06:29:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:29:20] ANSI_COLOR="0;31"
[2025-11-27 06:29:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:29:20] HOME_URL="https://www.centos.org/"
[2025-11-27 06:29:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:29:20] 
[2025-11-27 06:29:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:29:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:29:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:29:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:29:20] 
[2025-11-27 06:29:20] 2025-11-27 11:28:46,426 | INFO     | ***************************************
[2025-11-27 06:29:20] 2025-11-27 11:28:46,931 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 06:29:20] 2025-11-27 11:28:46,994 | INFO     | sufficient remaining disk space (68276977664 B)
[2025-11-27 06:29:20] 2025-11-27 11:28:46,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:29:20] 2025-11-27 11:28:46,994 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:29:20] 2025-11-27 11:28:46,994 | INFO     | update_server=False
[2025-11-27 06:29:20] 2025-11-27 11:28:46,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:29:20] 2025-11-27 11:28:46,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:29:20] 2025-11-27 11:28:46,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:29:20] 2025-11-27 11:28:46,996 | INFO     | aborting loop
[2025-11-27 06:29:20] 2025-11-27 11:28:47,780 | INFO     | all data control threads have been joined
[2025-11-27 06:29:20] 2025-11-27 11:28:48,000 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,035 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,139 | INFO     | all job control threads have been joined
[2025-11-27 06:29:20] 2025-11-27 11:28:48,411 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:29:20] 2025-11-27 11:28:48,476 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:29:20] 2025-11-27 11:28:48,507 | INFO     | all payload control threads have been joined
[2025-11-27 06:29:20] 2025-11-27 11:28:48,535 | INFO     | [job] validate thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,729 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,783 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,787 | INFO     | [data] control thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,787 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:48,846 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,051 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,144 | INFO     | [job] control thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,222 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,385 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,481 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:49,530 | INFO     | [payload] control thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:50,427 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:28:51,027 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:29:20] 2025-11-27 11:29:13,652 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:29:20] 2025-11-27 11:29:15,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528891021120)>', '<ExcThread(monitor, started 140528528103168)>']
[2025-11-27 06:29:20] 2025-11-27 11:29:17,517 | INFO     | PID=2655420 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:29:20] 2025-11-27 11:29:17,518 | INFO     | .. there are 75 such processes running
[2025-11-27 06:29:20] 2025-11-27 11:29:17,518 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:29:20] 2025-11-27 11:29:17,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:29:20] 2025-11-27 11:29:17,519 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:29:20] 2025-11-27 11:29:17,519 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:29:20] 2025-11-27 11:29:17,519 | INFO     | [monitor] control thread has ended
[2025-11-27 06:29:20] 2025-11-27 11:29:20,092 | INFO     | all workflow threads have been joined
[2025-11-27 06:29:20] 2025-11-27 11:29:20,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:29:20] 2025-11-27 11:29:20,092 | INFO     | traces error code: 0
[2025-11-27 06:29:20] 2025-11-27 11:29:20,092 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:29:20] 2025-11-27 11:29:20,329 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:29:20] 2025-11-27 11:29:20,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:29:20] 2025-11-27 11:29:20,336 [wrapper] pilotpid: 2655420
[2025-11-27 06:29:20] 2025-11-27 11:29:20,339 [wrapper] Pilot exit status: 0
[2025-11-27 06:29:20] 2025-11-27 11:29:20,357 [wrapper] pandaids: 6892543954
[2025-11-27 06:29:20] 2025-11-27 11:29:20,541 [wrapper] cleanup supervisor_pilot 3274413 2655421
[2025-11-27 06:29:20] 2025-11-27 11:29:20,544 [wrapper] Test setup, not cleaning
[2025-11-27 06:29:20] 2025-11-27 11:29:20,550 [wrapper] apfmon messages muted
[2025-11-27 06:29:20] 2025-11-27 11:29:20,553 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:29:20] 2025-11-27 11:29:20,562 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:29:20]  *** Error codes and diagnostics ***
[2025-11-27 06:29:20]     "exeErrorCode": 0,
[2025-11-27 06:29:20]     "exeErrorDiag": "",
[2025-11-27 06:29:20]     "pilotErrorCode": 0,
[2025-11-27 06:29:20]     "pilotErrorDiag": "",
[2025-11-27 06:29:20]  *** Listing of results directory ***
[2025-11-27 06:29:20] total 1326080
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:00 pilot3.tar.gz
[2025-11-27 06:29:20] -rwx------. 1 boincer umatlas     36292 Nov 19 03:03 runpilot2-wrapper.sh
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:03 queuedata.json
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:29:20] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:11 run_atlas
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:11 job.xml
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas 410833990 Nov 26 17:11 EVNT.47493027._000269.pool.root.1
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:11 start_atlas.sh
[2025-11-27 06:29:20] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:11 shared
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 17:11 input.tar.gz
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:11 boinc_lockfile
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas      2772 Nov 26 17:11 pandaJob.out
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas    991538 Nov 26 17:11 agis_schedconf.cvmfs.json
[2025-11-27 06:29:20] drwx------. 5 boincer umatlas      4096 Nov 26 17:11 pilot3
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:21 boinc_task_state.xml
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas 926731899 Nov 27 06:27 HITS.47493029._002644.pool.root.1
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas      1089 Nov 27 06:28 memory_monitor_summary.json
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 06:28 init_data.xml
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas   2000704 Nov 27 06:28 log.47493029._002644.job.log.tgz.1
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas      8637 Nov 27 06:28 heartbeat.json
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas        95 Nov 27 06:29 pilot_heartbeat.json
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:29 boinc_mmap_file
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:29 wrapper_checkpoint.txt
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas      4824 Nov 27 06:29 pilotlog.txt
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas   6209237 Nov 27 06:29 log.47493029._002644.job.log.1
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas       353 Nov 27 06:29 output.list
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:29 runtime_log
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas   8232960 Nov 27 06:29 result.tar.gz
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 06:29 runtime_log.err
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas       665 Nov 27 06:29 3JSLDm0Ksf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmSyGKDm8B8wAn.diag
[2025-11-27 06:29:20] -rw-r--r--. 1 boincer umatlas     21857 Nov 27 06:29 stderr.txt
[2025-11-27 06:29:20] HITS file was successfully produced:
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas 926731899 Nov 27 06:27 shared/HITS.pool.root.1
[2025-11-27 06:29:20]  *** Contents of shared directory: ***
[2025-11-27 06:29:20] total 1314864
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas 410833990 Nov 26 17:11 ATLAS.root_0
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:11 start_atlas.sh
[2025-11-27 06:29:20] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 17:11 input.tar.gz
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas 926731899 Nov 27 06:27 HITS.pool.root.1
[2025-11-27 06:29:20] -rw-------. 1 boincer umatlas   8232960 Nov 27 06:29 result.tar.gz
06:29:22 (2649826): run_atlas exited; CPU time 204136.013160
06:29:22 (2649826): called boinc_finish(0)

</stderr_txt>
]]>

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