Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:11:20 (3105779): wrapper (7.7.26015): starting
17:11:20 (3105779): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:11:20] Arguments: --nthreads 8
[2025-11-26 17:11:20] Threads: 8
[2025-11-26 17:11:20] Checking for CVMFS
[2025-11-26 17:11:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:11:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:11:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:11:22] 2.13.3.0 12846 30586 276832 153335 0 945 32151023 32935937 38044 16776704 0 162369542 99.495 203177908 38230 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:11:22] CVMFS is ok
[2025-11-26 17:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:11:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:11:23] Further information can be found at the LHC@home message board.
[2025-11-26 17:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:11:23] Checking for apptainer binary...
[2025-11-26 17:11:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:11:23] Running /usr/bin/apptainer --version
[2025-11-26 17:11:23] apptainer version 1.4.4-1.el9
[2025-11-26 17:11:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:11:24] c7-16-9.aglt2.org
[2025-11-26 17:11:24] apptainer works
[2025-11-26 17:11:24] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:11:24] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:11:24] Starting ATLAS job with PandaID=6897880983
[2025-11-26 17:11:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:09:51]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:09:52] 2025-11-28 04:08:53,560 | INFO     | monitor loop #6580: job 0:6897880983 is in state 'finished'
[2025-11-27 23:09:52] 2025-11-28 04:08:53,560 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:09:52] 2025-11-28 04:08:53,588 | INFO     | time since job start (107775s) is within the limit (172800.0s)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,054 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:09:52] 2025-11-28 04:08:54,059 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3048.635385416666
[2025-11-27 23:09:52] 2025-11-28 04:08:54,074 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897880983/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,074 | INFO     | extracted standard info from prmon json
[2025-11-27 23:09:52] 2025-11-28 04:08:54,074 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:09:52] 2025-11-28 04:08:54,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:09:52] 2025-11-28 04:08:54,102 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:09:52] 2025-11-28 04:08:54,104 | INFO     | sum of square deviations: 1704949740922.4683
[2025-11-27 23:09:52] 2025-11-28 04:08:54,157 | INFO     | sum of deviations: 9581991556022.588
[2025-11-27 23:09:52] 2025-11-28 04:08:54,157 | INFO     | mean x: 1764249103.9705381
[2025-11-27 23:09:52] 2025-11-28 04:08:54,157 | INFO     | mean y: 3015065.9535410763
[2025-11-27 23:09:52] 2025-11-28 04:08:54,157 | INFO     | intersect: -9912244962.661497
[2025-11-27 23:09:52] 2025-11-28 04:08:54,159 | INFO     | chi2: 15.614237120834096
[2025-11-27 23:09:52] 2025-11-28 04:08:54,160 | INFO     | sum of square deviations: 1690501583172.7456
[2025-11-27 23:09:52] 2025-11-28 04:08:54,218 | INFO     | sum of deviations: 10218780586987.865
[2025-11-27 23:09:52] 2025-11-28 04:08:54,218 | INFO     | mean x: 1764248951.4732955
[2025-11-27 23:09:52] 2025-11-28 04:08:54,218 | INFO     | mean y: 3021786.7948863637
[2025-11-27 23:09:52] 2025-11-28 04:08:54,218 | INFO     | intersect: -10661548489.497337
[2025-11-27 23:09:52] 2025-11-28 04:08:54,220 | INFO     | chi2: 12.284408438598284
[2025-11-27 23:09:52] 2025-11-28 04:08:54,220 | INFO     | current chi2=12.284408438598284 (change=21.325593152372573 %)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,220 | INFO     | right removable region: 1759
[2025-11-27 23:09:52] 2025-11-28 04:08:54,222 | INFO     | sum of square deviations: 1690500538242.7446
[2025-11-27 23:09:52] 2025-11-28 04:08:54,278 | INFO     | sum of deviations: 8820811806385.48
[2025-11-27 23:09:52] 2025-11-28 04:08:54,278 | INFO     | mean x: 1764249256.4732955
[2025-11-27 23:09:52] 2025-11-28 04:08:54,279 | INFO     | mean y: 3023099.095454545
[2025-11-27 23:09:52] 2025-11-28 04:08:54,279 | INFO     | intersect: -9202599921.340303
[2025-11-27 23:09:52] 2025-11-28 04:08:54,280 | INFO     | chi2: 11.239107638362011
[2025-11-27 23:09:52] 2025-11-28 04:08:54,280 | INFO     | current chi2=11.239107638362011 (change=28.020129633066375 %)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,282 | INFO     | sum of square deviations: 1676133197562.9944
[2025-11-27 23:09:52] 2025-11-28 04:08:54,338 | INFO     | sum of deviations: 8155464256427.497
[2025-11-27 23:09:52] 2025-11-28 04:08:54,339 | INFO     | mean x: 1764249408.9760683
[2025-11-27 23:09:52] 2025-11-28 04:08:54,339 | INFO     | mean y: 3030161.512250712
[2025-11-27 23:09:52] 2025-11-28 04:08:54,339 | INFO     | intersect: -8581176043.130328
[2025-11-27 23:09:52] 2025-11-28 04:08:54,340 | INFO     | chi2: 8.040322602712582
[2025-11-27 23:09:52] 2025-11-28 04:08:54,340 | INFO     | current chi2=8.040322602712582 (change=28.46120117874074 %)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,342 | INFO     | sum of square deviations: 1661847807122.585
[2025-11-27 23:09:52] 2025-11-28 04:08:54,396 | INFO     | sum of deviations: 7843644116464.297
[2025-11-27 23:09:52] 2025-11-28 04:08:54,397 | INFO     | mean x: 1764249561.4771428
[2025-11-27 23:09:52] 2025-11-28 04:08:54,397 | INFO     | mean y: 3033487.9577142857
[2025-11-27 23:09:52] 2025-11-28 04:08:54,397 | INFO     | intersect: -8323929807.685487
[2025-11-27 23:09:52] 2025-11-28 04:08:54,398 | INFO     | chi2: 7.326920464997768
[2025-11-27 23:09:52] 2025-11-28 04:08:54,398 | INFO     | current chi2=7.326920464997768 (change=8.87280489807874 %)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,398 | INFO     | left removable region: 30
[2025-11-27 23:09:52] 2025-11-28 04:08:54,400 | INFO     | sum of square deviations: 1602737242249.165
[2025-11-27 23:09:52] 2025-11-28 04:08:54,454 | INFO     | sum of deviations: 8065505291773.223
[2025-11-27 23:09:52] 2025-11-28 04:08:54,454 | INFO     | mean x: 1764249835.9780219
[2025-11-27 23:09:52] 2025-11-28 04:08:54,454 | INFO     | mean y: 3046738.242336611
[2025-11-27 23:09:52] 2025-11-28 04:08:54,454 | INFO     | intersect: -8875243484.877478
[2025-11-27 23:09:52] 2025-11-28 04:08:54,456 | INFO     | chi2: 3.3652936600075183
[2025-11-27 23:09:52] 2025-11-28 04:08:54,456 | INFO     | current memory leak: 5.03 B/s (using 1729 data points, chi2=3.37)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,457 | INFO     | could have reported an average CPU frequency of 3090 MHz (63 samples)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | ..............................
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . Timing measurements:
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . get job = 0 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . initial setup = 5 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . payload setup = 45 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . stage-in = 0 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . payload execution = 107643 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . stage-out = 5 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | . log creation = 1 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,458 | INFO     | ..............................
[2025-11-27 23:09:52] 2025-11-28 04:08:54,557 | INFO     | 
[2025-11-27 23:09:52] 2025-11-28 04:08:54,557 | INFO     | job summary report
[2025-11-27 23:09:52] 2025-11-28 04:08:54,557 | INFO     | --------------------------------------------------
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | PanDA job id: 6897880983
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | task id: 47556161
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | errors: (none)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | pilot state: finished 
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | transexitcode: 0
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | exeerrorcode: 0
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | exeerrordiag: 
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | exitcode: 0
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | exitmsg: OK
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | cpuconsumptiontime: 218099 s
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | nevents: 1000
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | neventsw: 0
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | pid: 3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | pgrp: 3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | corecount: 8
[2025-11-27 23:09:52] 2025-11-28 04:08:54,558 | INFO     | event service: False
[2025-11-27 23:09:52] 2025-11-28 04:08:54,559 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 31: 2284638, 34: 2284794, 107694: 2360554, 107695: 2360553, 107702: 2369603, 107703: 2369659,
[2025-11-27 23:09:52] 2025-11-28 04:08:54,559 | INFO     | --------------------------------------------------
[2025-11-27 23:09:52] 2025-11-28 04:08:54,559 | INFO     | 
[2025-11-27 23:09:52] 2025-11-28 04:08:54,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 23:09:52] 2025-11-28 04:08:54,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:09:52] 2025-11-28 04:08:54,601 | INFO     | job 6897880983 has completed (purged errors)
[2025-11-27 23:09:52] 2025-11-28 04:08:54,602 | INFO     | overall cleanup function is called
[2025-11-27 23:09:52] 2025-11-28 04:08:55,621 | INFO     | --- collectZombieJob: --- 10, [3146488]
[2025-11-27 23:09:52] 2025-11-28 04:08:55,621 | INFO     | zombie collector waiting for pid 3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:55,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:09:52] 2025-11-28 04:08:55,621 | INFO     | collected zombie processes
[2025-11-27 23:09:52] 2025-11-28 04:08:55,621 | INFO     | will attempt to kill all subprocesses of pid=3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:56,682 | INFO     | process IDs to be killed: [3146488] (in reverse order)
[2025-11-27 23:09:52] 2025-11-28 04:08:57,048 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:09:52] 2025-11-28 04:08:57,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:09:52] 2025-11-28 04:08:57,176 | INFO     | did not find any defunct processes belonging to 3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:57,208 | INFO     | did not find any defunct processes belonging to 3146488
[2025-11-27 23:09:52] 2025-11-28 04:08:57,211 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:09:52] 2025-11-28 04:08:57,211 | INFO     | ready for new job
[2025-11-27 23:09:52] 2025-11-28 04:08:57,211 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:09:52] 2025-11-28 04:08:57,220 | INFO     | ***************************************
[2025-11-27 23:09:52] 2025-11-28 04:08:57,220 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:09:52] 2025-11-28 04:08:57,220 | INFO     | ***************************************
[2025-11-27 23:09:52] 2025-11-28 04:08:57,220 | INFO     | 
[2025-11-27 23:09:52] 2025-11-28 04:08:57,254 | INFO     | architecture information:
[2025-11-27 23:09:52] 2025-11-28 04:08:57,267 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:09:52] 2025-11-28 04:08:57,315 | INFO     | cat /etc/os-release:
[2025-11-27 23:09:52] NAME="CentOS Linux"
[2025-11-27 23:09:52] VERSION="7 (Core)"
[2025-11-27 23:09:52] ID="centos"
[2025-11-27 23:09:52] ID_LIKE="rhel fedora"
[2025-11-27 23:09:52] VERSION_ID="7"
[2025-11-27 23:09:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:09:52] ANSI_COLOR="0;31"
[2025-11-27 23:09:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:09:52] HOME_URL="https://www.centos.org/"
[2025-11-27 23:09:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:09:52] 
[2025-11-27 23:09:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:09:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:09:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:09:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:09:52] 
[2025-11-27 23:09:52] 2025-11-28 04:08:57,315 | INFO     | ***************************************
[2025-11-27 23:09:52] 2025-11-28 04:08:57,818 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 23:09:52] 2025-11-28 04:08:57,905 | INFO     | sufficient remaining disk space (68365058048 B)
[2025-11-27 23:09:52] 2025-11-28 04:08:57,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:09:52] 2025-11-28 04:08:57,905 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:09:52] 2025-11-28 04:08:57,905 | INFO     | update_server=False
[2025-11-27 23:09:52] 2025-11-28 04:08:57,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:09:52] 2025-11-28 04:08:57,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:09:52] 2025-11-28 04:08:57,906 | INFO     | aborting loop
[2025-11-27 23:09:52] 2025-11-28 04:08:57,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:09:52] 2025-11-28 04:08:57,916 | INFO     | all data control threads have been joined
[2025-11-27 23:09:52] 2025-11-28 04:08:58,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:09:52] 2025-11-28 04:08:58,657 | INFO     | all payload control threads have been joined
[2025-11-27 23:09:52] 2025-11-28 04:08:58,674 | INFO     | all job control threads have been joined
[2025-11-27 23:09:52] 2025-11-28 04:08:58,914 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:58,914 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:58,915 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:58,923 | INFO     | [data] control thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:58,963 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,007 | INFO     | [job] validate thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,043 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,181 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,269 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:09:52] 2025-11-28 04:08:59,645 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,666 | INFO     | [payload] control thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,683 | INFO     | [job] control thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:08:59,916 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:09:00,184 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:09:00,600 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:09:02,170 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:09:52] 2025-11-28 04:09:27,587 | INFO     | PID=3119707 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 23:09:52] 2025-11-28 04:09:27,589 | INFO     | .. there are 54 such processes running
[2025-11-27 23:09:52] 2025-11-28 04:09:27,589 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:09:52] 2025-11-28 04:09:27,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:09:52] 2025-11-28 04:09:27,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:09:52] 2025-11-28 04:09:43,917 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:09:52] 2025-11-28 04:09:45,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140082617390912)>', '<ExcThread(monitor, started 140081893467904)>']
[2025-11-27 23:09:52] 2025-11-28 04:09:45,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:09:52] 2025-11-28 04:09:45,700 | INFO     | [monitor] control thread has ended
[2025-11-27 23:09:52] 2025-11-28 04:09:50,070 | INFO     | all workflow threads have been joined
[2025-11-27 23:09:52] 2025-11-28 04:09:50,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:09:52] 2025-11-28 04:09:50,071 | INFO     | traces error code: 0
[2025-11-27 23:09:52] 2025-11-28 04:09:50,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:09:52] 2025-11-28 04:09:50,670 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:09:52] 2025-11-28 04:09:50,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:09:52] 2025-11-28 04:09:50,726 [wrapper] pilotpid: 3119707
[2025-11-27 23:09:52] 2025-11-28 04:09:50,761 [wrapper] Pilot exit status: 0
[2025-11-27 23:09:52] 2025-11-28 04:09:50,964 [wrapper] pandaids: 6897880983
[2025-11-27 23:09:52] 2025-11-28 04:09:51,222 [wrapper] cleanup supervisor_pilot 3563267 3119708
[2025-11-27 23:09:52] 2025-11-28 04:09:51,226 [wrapper] Test setup, not cleaning
[2025-11-27 23:09:52] 2025-11-28 04:09:51,229 [wrapper] apfmon messages muted
[2025-11-27 23:09:52] 2025-11-28 04:09:51,248 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:09:52] 2025-11-28 04:09:51,265 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:09:52]  *** Error codes and diagnostics ***
[2025-11-27 23:09:52]     "exeErrorCode": 0,
[2025-11-27 23:09:52]     "exeErrorDiag": "",
[2025-11-27 23:09:52]     "pilotErrorCode": 0,
[2025-11-27 23:09:52]     "pilotErrorDiag": "",
[2025-11-27 23:09:52]  *** Listing of results directory ***
[2025-11-27 23:09:52] total 1333304
[2025-11-27 23:09:52] -rwx------. 1 boincer umatlas     36292 Nov 25 20:44 runpilot2-wrapper.sh
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 20:44 queuedata.json
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:09:52] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:11 run_atlas
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:11 job.xml
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas 410987145 Nov 26 17:11 EVNT.47483658._002354.pool.root.1
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:11 start_atlas.sh
[2025-11-27 23:09:52] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:11 shared
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 17:11 input.tar.gz
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:11 boinc_lockfile
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 17:11 pandaJob.out
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas        57 Nov 26 17:11 setup.sh.local
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas    991538 Nov 26 17:12 agis_schedconf.cvmfs.json
[2025-11-27 23:09:52] drwx------. 5 boincer umatlas      4096 Nov 26 17:12 pilot3
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas       533 Nov 27 22:42 boinc_task_state.xml
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 23:00 init_data.xml
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas 917381695 Nov 27 23:07 HITS.47556161._003367.pool.root.1
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas      1072 Nov 27 23:08 memory_monitor_summary.json
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas   1516240 Nov 27 23:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas   2714467 Nov 27 23:08 log.47556161._003367.job.log.tgz.1
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas      8625 Nov 27 23:08 heartbeat.json
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas        95 Nov 27 23:09 pilot_heartbeat.json
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 23:09 boinc_mmap_file
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas        29 Nov 27 23:09 wrapper_checkpoint.txt
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas      4824 Nov 27 23:09 pilotlog.txt
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas  13788851 Nov 27 23:09 log.47556161._003367.job.log.1
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas       353 Nov 27 23:09 output.list
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas       620 Nov 27 23:09 runtime_log
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas  16527360 Nov 27 23:09 result.tar.gz
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas       669 Nov 27 23:09 ta2NDm9kJi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyfMKDmiLOgjm.diag
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas      9339 Nov 27 23:09 runtime_log.err
[2025-11-27 23:09:52] -rw-r--r--. 1 boincer umatlas     21388 Nov 27 23:09 stderr.txt
[2025-11-27 23:09:52] HITS file was successfully produced:
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas 917381695 Nov 27 23:07 shared/HITS.pool.root.1
[2025-11-27 23:09:52]  *** Contents of shared directory: ***
[2025-11-27 23:09:52] total 1313984
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas 410987145 Nov 26 17:11 ATLAS.root_0
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:11 start_atlas.sh
[2025-11-27 23:09:52] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 17:11 input.tar.gz
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas 917381695 Nov 27 23:07 HITS.pool.root.1
[2025-11-27 23:09:52] -rw-------. 1 boincer umatlas  16527360 Nov 27 23:09 result.tar.gz
23:09:53 (3105779): run_atlas exited; CPU time 222029.600076
23:09:53 (3105779): called boinc_finish(0)

</stderr_txt>
]]>

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