Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:30:59 (3751224): wrapper (7.7.26015): starting
17:30:59 (3751224): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 17:30:59] Arguments: --nthreads 9
[2025-11-26 17:30:59] Threads: 9
[2025-11-26 17:30:59] Checking for CVMFS
[2025-11-26 17:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:31:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:31:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:31:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:31:01] 2.13.3.0 22787 30602 227372 153337 2 520 26252831 40960001 47538 16776704 0 443878250 99.754 262101543 47988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:31:01] CVMFS is ok
[2025-11-26 17:31:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:31:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:31:01] Further information can be found at the LHC@home message board.
[2025-11-26 17:31:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:31:01] Checking for apptainer binary...
[2025-11-26 17:31:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:31:01] Running /usr/bin/apptainer --version
[2025-11-26 17:31:01] apptainer version 1.4.4-1.el9
[2025-11-26 17:31:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:31:02] c8-6-11.aglt2.org
[2025-11-26 17:31:02] apptainer works
[2025-11-26 17:31:02] Set ATHENA_PROC_NUMBER=9
[2025-11-26 17:31:02] Set ATHENA_CORE_NUMBER=9
[2025-11-26 17:31:02] Starting ATLAS job with PandaID=6893859972
[2025-11-26 17:31:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:28:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:28:34] 2025-11-27 07:27:06,840 | INFO     | time since job start (32080s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:08,708 | INFO     | monitor loop #1801: job 0:6893859972 is in state 'finished'
[2025-11-27 02:28:34] 2025-11-27 07:27:08,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:28:34] 2025-11-27 07:27:08,852 | INFO     | time since job start (32082s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:10,864 | INFO     | time since job start (32084s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:11,218 | INFO     | monitor loop #1802: job 0:6893859972 is in state 'finished'
[2025-11-27 02:28:34] 2025-11-27 07:27:11,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:28:34] 2025-11-27 07:27:12,874 | INFO     | time since job start (32086s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:13,723 | INFO     | monitor loop #1803: job 0:6893859972 is in state 'finished'
[2025-11-27 02:28:34] 2025-11-27 07:27:13,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:28:34] 2025-11-27 07:27:14,881 | INFO     | time since job start (32088s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:16,231 | INFO     | monitor loop #1804: job 0:6893859972 is in state 'finished'
[2025-11-27 02:28:34] 2025-11-27 07:27:16,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:28:34] 2025-11-27 07:27:16,893 | INFO     | time since job start (32090s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:18,736 | INFO     | monitor loop #1805: job 0:6893859972 is in state 'finished'
[2025-11-27 02:28:34] 2025-11-27 07:27:18,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:28:34] 2025-11-27 07:27:18,902 | INFO     | time since job start (32092s) is within the limit (172800.0s)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,297 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:28:34] 2025-11-27 07:27:19,319 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3794.3721640624995
[2025-11-27 02:28:34] 2025-11-27 07:27:19,345 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6893859972/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,345 | INFO     | extracted standard info from prmon json
[2025-11-27 02:28:34] 2025-11-27 07:27:19,345 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:28:34] 2025-11-27 07:27:19,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:28:34] 2025-11-27 07:27:19,359 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:28:34] 2025-11-27 07:27:19,360 | INFO     | sum of square deviations: 44614721579.68724
[2025-11-27 02:28:34] 2025-11-27 07:27:19,367 | INFO     | sum of deviations: 35906547231.78901
[2025-11-27 02:28:34] 2025-11-27 07:27:19,367 | INFO     | mean x: 1764212429.8740458
[2025-11-27 02:28:34] 2025-11-27 07:27:19,367 | INFO     | mean y: 2962316.830152672
[2025-11-27 02:28:34] 2025-11-27 07:27:19,368 | INFO     | intersect: -1416900336.062049
[2025-11-27 02:28:34] 2025-11-27 07:27:19,368 | INFO     | chi2: 17.503539086845738
[2025-11-27 02:28:34] 2025-11-27 07:27:19,368 | INFO     | sum of square deviations: 43349968615.15659
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | sum of deviations: 228580980444.5842
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | mean x: 1764212277.3872833
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | mean y: 2985547.3005780345
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | intersect: -9299567256.31467
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | chi2: 13.558314022066227
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | current chi2=13.558314022066227 (change=22.53958496738769 %)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,376 | INFO     | right removable region: 518
[2025-11-27 02:28:34] 2025-11-27 07:27:19,377 | INFO     | sum of square deviations: 43349529415.15659
[2025-11-27 02:28:34] 2025-11-27 07:27:19,384 | INFO     | sum of deviations: -169827672462.156
[2025-11-27 02:28:34] 2025-11-27 07:27:19,384 | INFO     | mean x: 1764212582.3872833
[2025-11-27 02:28:34] 2025-11-27 07:27:19,384 | INFO     | mean y: 2987101.9460500963
[2025-11-27 02:28:34] 2025-11-27 07:27:19,384 | INFO     | intersect: 6914529640.872125
[2025-11-27 02:28:34] 2025-11-27 07:27:19,385 | INFO     | chi2: 13.877549911200198
[2025-11-27 02:28:34] 2025-11-27 07:27:19,385 | INFO     | current chi2=13.877549911200198 (change=20.715748727470455 %)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,385 | INFO     | left removable region: 10
[2025-11-27 02:28:34] 2025-11-27 07:27:19,385 | INFO     | sum of square deviations: 40651590702.67698
[2025-11-27 02:28:34] 2025-11-27 07:27:19,400 | INFO     | sum of deviations: 17005792251.826881
[2025-11-27 02:28:34] 2025-11-27 07:27:19,400 | INFO     | mean x: 1764212551.8976378
[2025-11-27 02:28:34] 2025-11-27 07:27:19,400 | INFO     | mean y: 3021585.688976378
[2025-11-27 02:28:34] 2025-11-27 07:27:19,400 | INFO     | intersect: -735001985.5180639
[2025-11-27 02:28:34] 2025-11-27 07:27:19,405 | INFO     | chi2: 8.894783663648123
[2025-11-27 02:28:34] 2025-11-27 07:27:19,405 | INFO     | current memory leak: 0.42 B/s (using 508 data points, chi2=8.89)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | could have reported an average CPU frequency of 3796 MHz (21 samples)
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | ..............................
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . Timing measurements:
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . get job = 0 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . initial setup = 5 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . payload setup = 39 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . stage-in = 0 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . payload execution = 31944 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . stage-out = 6 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | . log creation = 1 s
[2025-11-27 02:28:34] 2025-11-27 07:27:19,406 | INFO     | ..............................
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | 
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | job summary report
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | --------------------------------------------------
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | PanDA job id: 6893859972
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | task id: 47523449
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | errors: (none)
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | pilot state: finished 
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | transexitcode: 0
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | exeerrorcode: 0
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | exeerrordiag: 
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | exitcode: 0
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | exitmsg: OK
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | cpuconsumptiontime: 141210 s
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | nevents: 1000
[2025-11-27 02:28:34] 2025-11-27 07:27:20,079 | INFO     | neventsw: 0
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | pid: 3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | pgrp: 3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | corecount: 9
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | event service: False
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 22: 2284371, 31: 2284661, 33: 2284689, 31985: 2324163, 31994: 2333157, 31997: 2333213, 32027: 2333459}
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | --------------------------------------------------
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | 
[2025-11-27 02:28:34] 2025-11-27 07:27:20,080 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | job 6893859972 has completed (purged errors)
[2025-11-27 02:28:34] 2025-11-27 07:27:20,192 | INFO     | overall cleanup function is called
[2025-11-27 02:28:34] 2025-11-27 07:27:21,226 | INFO     | --- collectZombieJob: --- 10, [3814529]
[2025-11-27 02:28:34] 2025-11-27 07:27:21,226 | INFO     | zombie collector waiting for pid 3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:21,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:28:34] 2025-11-27 07:27:21,226 | INFO     | collected zombie processes
[2025-11-27 02:28:34] 2025-11-27 07:27:21,226 | INFO     | will attempt to kill all subprocesses of pid=3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:25,184 | INFO     | process IDs to be killed: [3814529] (in reverse order)
[2025-11-27 02:28:34] 2025-11-27 07:27:25,592 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:28:34] 2025-11-27 07:27:25,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:28:34] 2025-11-27 07:27:25,854 | INFO     | did not find any defunct processes belonging to 3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:25,986 | INFO     | did not find any defunct processes belonging to 3814529
[2025-11-27 02:28:34] 2025-11-27 07:27:26,001 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:28:34] 2025-11-27 07:27:26,001 | INFO     | ready for new job
[2025-11-27 02:28:34] 2025-11-27 07:27:26,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:28:34] 2025-11-27 07:27:26,003 | INFO     | ***************************************
[2025-11-27 02:28:34] 2025-11-27 07:27:26,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:28:34] 2025-11-27 07:27:26,003 | INFO     | ***************************************
[2025-11-27 02:28:34] 2025-11-27 07:27:26,003 | INFO     | 
[2025-11-27 02:28:34] 2025-11-27 07:27:26,012 | INFO     | architecture information:
[2025-11-27 02:28:34] 2025-11-27 07:27:26,020 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:28:34] 2025-11-27 07:27:26,110 | INFO     | cat /etc/os-release:
[2025-11-27 02:28:34] NAME="CentOS Linux"
[2025-11-27 02:28:34] VERSION="7 (Core)"
[2025-11-27 02:28:34] ID="centos"
[2025-11-27 02:28:34] ID_LIKE="rhel fedora"
[2025-11-27 02:28:34] VERSION_ID="7"
[2025-11-27 02:28:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:28:34] ANSI_COLOR="0;31"
[2025-11-27 02:28:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:28:34] HOME_URL="https://www.centos.org/"
[2025-11-27 02:28:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:28:34] 
[2025-11-27 02:28:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:28:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:28:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:28:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:28:34] 
[2025-11-27 02:28:34] 2025-11-27 07:27:26,110 | INFO     | ***************************************
[2025-11-27 02:28:34] 2025-11-27 07:27:26,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 02:28:34] 2025-11-27 07:27:26,687 | INFO     | sufficient remaining disk space (155196588032 B)
[2025-11-27 02:28:34] 2025-11-27 07:27:26,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:28:34] 2025-11-27 07:27:26,688 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:28:34] 2025-11-27 07:27:26,688 | INFO     | update_server=False
[2025-11-27 02:28:34] 2025-11-27 07:27:26,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:28:34] 2025-11-27 07:27:27,052 | INFO     | all data control threads have been joined
[2025-11-27 02:28:34] 2025-11-27 07:27:27,202 | INFO     | all job control threads have been joined
[2025-11-27 02:28:34] 2025-11-27 07:27:27,202 | INFO     | all payload control threads have been joined
[2025-11-27 02:28:34] 2025-11-27 07:27:27,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:28:34] 2025-11-27 07:27:27,304 | INFO     | aborting loop
[2025-11-27 02:28:34] 2025-11-27 07:27:27,694 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:27,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:28:34] 2025-11-27 07:27:27,795 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:28:34] 2025-11-27 07:27:28,058 | INFO     | [data] control thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,163 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,194 | INFO     | [job] validate thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,194 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,200 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,212 | INFO     | [job] control thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,212 | INFO     | [payload] control thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,310 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,361 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,377 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,522 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:28,651 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:28:34] 2025-11-27 07:27:29,657 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:30,047 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:31,741 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:28:34] 2025-11-27 07:27:56,058 | INFO     | PID=3769297 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:28:34] 2025-11-27 07:27:56,058 | INFO     | .. there are 92 such processes running
[2025-11-27 02:28:34] 2025-11-27 07:27:56,058 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:28:34] 2025-11-27 07:27:56,058 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:28:34] 2025-11-27 07:27:56,059 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:28:34] 2025-11-27 07:28:25,396 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:28:34] 2025-11-27 07:28:26,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564037134144)>', '<ExcThread(monitor, started 140563399567104)>']
[2025-11-27 02:28:34] 2025-11-27 07:28:27,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:28:34] 2025-11-27 07:28:27,321 | INFO     | [monitor] control thread has ended
[2025-11-27 02:28:34] 2025-11-27 07:28:31,367 | INFO     | all workflow threads have been joined
[2025-11-27 02:28:34] 2025-11-27 07:28:31,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:28:34] 2025-11-27 07:28:31,388 | INFO     | traces error code: 0
[2025-11-27 02:28:34] 2025-11-27 07:28:31,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:28:34] 2025-11-27 07:28:32,509 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:28:34] 2025-11-27 07:28:32,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:28:34] 2025-11-27 07:28:32,574 [wrapper] pilotpid: 3769297
[2025-11-27 02:28:34] 2025-11-27 07:28:32,662 [wrapper] Pilot exit status: 0
[2025-11-27 02:28:34] 2025-11-27 07:28:32,733 [wrapper] pandaids: 6893859972
[2025-11-27 02:28:34] 2025-11-27 07:28:33,417 [wrapper] cleanup supervisor_pilot 1031168 3769298
[2025-11-27 02:28:34] 2025-11-27 07:28:33,423 [wrapper] Test setup, not cleaning
[2025-11-27 02:28:34] 2025-11-27 07:28:33,428 [wrapper] apfmon messages muted
[2025-11-27 02:28:34] 2025-11-27 07:28:33,440 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:28:34] 2025-11-27 07:28:33,444 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:28:34]  *** Error codes and diagnostics ***
[2025-11-27 02:28:34]     "exeErrorCode": 0,
[2025-11-27 02:28:34]     "exeErrorDiag": "",
[2025-11-27 02:28:34]     "pilotErrorCode": 0,
[2025-11-27 02:28:34]     "pilotErrorDiag": "",
[2025-11-27 02:28:34]  *** Listing of results directory ***
[2025-11-27 02:28:34] total 1323588
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-27 02:28:34] -rwx------. 1 boincer umatlas     36292 Nov 20 08:32 runpilot2-wrapper.sh
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:32 queuedata.json
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:28:34] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:30 run_atlas
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:30 job.xml
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas 409470458 Nov 26 17:30 EVNT.47493127._000535.pool.root.1
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:30 start_atlas.sh
[2025-11-27 02:28:34] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:30 shared
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 17:30 input.tar.gz
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:30 boinc_lockfile
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 17:31 pandaJob.out
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas        57 Nov 26 17:31 setup.sh.local
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas    991546 Nov 26 17:32 agis_schedconf.cvmfs.json
[2025-11-27 02:28:34] drwx------. 5 boincer umatlas      4096 Nov 26 17:32 pilot3
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:04 boinc_task_state.xml
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 02:21 init_data.xml
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas 930430075 Nov 27 02:25 HITS.47523449._005347.pool.root.1
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas      1077 Nov 27 02:26 memory_monitor_summary.json
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas   1861484 Nov 27 02:26 log.47523449._005347.job.log.tgz.1
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas        95 Nov 27 02:27 pilot_heartbeat.json
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas      8636 Nov 27 02:27 heartbeat.json
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:28 wrapper_checkpoint.txt
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:28 boinc_mmap_file
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas      4825 Nov 27 02:28 pilotlog.txt
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas   3900767 Nov 27 02:28 log.47523449._005347.job.log.1
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas       353 Nov 27 02:28 output.list
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:28 runtime_log
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas   5785600 Nov 27 02:28 result.tar.gz
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 02:28 runtime_log.err
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas       665 Nov 27 02:28 knGODmKxJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxiGKDmwJCCvn.diag
[2025-11-27 02:28:34] -rw-r--r--. 1 boincer umatlas     21798 Nov 27 02:28 stderr.txt
[2025-11-27 02:28:34] HITS file was successfully produced:
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas 930430075 Nov 27 02:25 shared/HITS.pool.root.1
[2025-11-27 02:28:34]  *** Contents of shared directory: ***
[2025-11-27 02:28:34] total 1314756
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas 409470458 Nov 26 17:30 ATLAS.root_0
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:30 start_atlas.sh
[2025-11-27 02:28:34] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 17:30 input.tar.gz
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas 930430075 Nov 27 02:25 HITS.pool.root.1
[2025-11-27 02:28:34] -rw-------. 1 boincer umatlas   5785600 Nov 27 02:28 result.tar.gz
02:28:36 (3751224): run_atlas exited; CPU time 141886.593247
02:28:36 (3751224): called boinc_finish(0)

</stderr_txt>
]]>

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