Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:53:26 (1303853): wrapper (7.7.26015): starting
16:53:26 (1303853): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 16:53:26] Arguments: --nthreads 9
[2025-11-26 16:53:26] Threads: 9
[2025-11-26 16:53:26] Checking for CVMFS
[2025-11-26 16:53:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:53:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:53:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:53:28] 2.13.3.0 16090 30567 439684 153335 1 955 21603140 32935937 64514 16776704 0 434799725 99.630 389446857 52183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:53:28] CVMFS is ok
[2025-11-26 16:53:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:53:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:53:28] Further information can be found at the LHC@home message board.
[2025-11-26 16:53:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:53:28] Checking for apptainer binary...
[2025-11-26 16:53:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:53:28] Running /usr/bin/apptainer --version
[2025-11-26 16:53:28] apptainer version 1.4.4-1.el9
[2025-11-26 16:53:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:53:29] c7-9-15.aglt2.org
[2025-11-26 16:53:29] apptainer works
[2025-11-26 16:53:29] Set ATHENA_PROC_NUMBER=9
[2025-11-26 16:53:29] Set ATHENA_CORE_NUMBER=9
[2025-11-26 16:53:29] Starting ATLAS job with PandaID=6891597057
[2025-11-26 16:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:14:26]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:14:27] 2025-11-27 08:13:15,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:14:27] 2025-11-27 08:13:17,196 | INFO     | time since job start (37084s) is within the limit (172800.0s)
[2025-11-27 03:14:27] 2025-11-27 08:13:18,038 | INFO     | monitor loop #2136: job 0:6891597057 is in state 'finished'
[2025-11-27 03:14:27] 2025-11-27 08:13:18,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:14:27] 2025-11-27 08:13:20,557 | INFO     | monitor loop #2137: job 0:6891597057 is in state 'finished'
[2025-11-27 03:14:27] 2025-11-27 08:13:20,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:14:27] 2025-11-27 08:13:21,836 | INFO     | PID=1324745 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:14:27] 2025-11-27 08:13:21,836 | INFO     | .. there are 101 such processes running
[2025-11-27 03:14:27] 2025-11-27 08:13:22,851 | INFO     | time since job start (37089s) is within the limit (172800.0s)
[2025-11-27 03:14:27] 2025-11-27 08:13:23,062 | INFO     | monitor loop #2138: job 0:6891597057 is in state 'finished'
[2025-11-27 03:14:27] 2025-11-27 08:13:23,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:14:27] 2025-11-27 08:13:24,862 | INFO     | time since job start (37091s) is within the limit (172800.0s)
[2025-11-27 03:14:27] 2025-11-27 08:13:25,573 | INFO     | monitor loop #2139: job 0:6891597057 is in state 'finished'
[2025-11-27 03:14:27] 2025-11-27 08:13:25,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:14:27] 2025-11-27 08:13:26,870 | INFO     | time since job start (37093s) is within the limit (172800.0s)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,320 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 03:14:27] 2025-11-27 08:13:27,347 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3780.7091562500013
[2025-11-27 03:14:27] 2025-11-27 08:13:27,395 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6891597057/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,395 | INFO     | extracted standard info from prmon json
[2025-11-27 03:14:27] 2025-11-27 08:13:27,395 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:14:27] 2025-11-27 08:13:27,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:14:27] 2025-11-27 08:13:27,400 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:14:27] 2025-11-27 08:13:27,401 | INFO     | sum of square deviations: 68326809640.046295
[2025-11-27 03:14:27] 2025-11-27 08:13:27,405 | INFO     | sum of deviations: 588446961505.7144
[2025-11-27 03:14:27] 2025-11-27 08:13:27,405 | INFO     | mean x: 1764212760.460265
[2025-11-27 03:14:27] 2025-11-27 08:13:27,405 | INFO     | mean y: 2899830.0298013245
[2025-11-27 03:14:27] 2025-11-27 08:13:27,405 | INFO     | intersect: -15190925899.746338
[2025-11-27 03:14:27] 2025-11-27 08:13:27,406 | INFO     | chi2: 31.186426114101078
[2025-11-27 03:14:27] 2025-11-27 08:13:27,406 | INFO     | sum of square deviations: 66644145680.39728
[2025-11-27 03:14:27] 2025-11-27 08:13:27,410 | INFO     | sum of deviations: 796149974656.6262
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | mean x: 1764212607.9682806
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | mean y: 2918650.559265442
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | intersect: -21072868408.948196
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | chi2: 27.615418749821934
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | current chi2=27.615418749821934 (change=11.450518091473448 %)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | right removable region: 598
[2025-11-27 03:14:27] 2025-11-27 08:13:27,411 | INFO     | sum of square deviations: 66643791880.39729
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | sum of deviations: 329545780446.4281
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | mean x: 1764212912.9682806
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | mean y: 2923288.1803005007
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | intersect: -8720903866.21079
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | chi2: 26.205120823386498
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | current chi2=26.205120823386498 (change=15.972671163055333 %)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,416 | INFO     | left removable region: 10
[2025-11-27 03:14:27] 2025-11-27 08:13:27,417 | INFO     | sum of square deviations: 63039320596.89116
[2025-11-27 03:14:27] 2025-11-27 08:13:27,421 | INFO     | sum of deviations: 351652418947.2901
[2025-11-27 03:14:27] 2025-11-27 08:13:27,421 | INFO     | mean x: 1764212882.4863946
[2025-11-27 03:14:27] 2025-11-27 08:13:27,421 | INFO     | mean y: 2968190.3486394556
[2025-11-27 03:14:27] 2025-11-27 08:13:27,421 | INFO     | intersect: -9838345481.65986
[2025-11-27 03:14:27] 2025-11-27 08:13:27,422 | INFO     | chi2: 17.969859150442936
[2025-11-27 03:14:27] 2025-11-27 08:13:27,422 | INFO     | current memory leak: 5.58 B/s (using 588 data points, chi2=17.97)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,422 | INFO     | could have reported an average CPU frequency of 3795 MHz (24 samples)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,422 | INFO     | ..............................
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . Timing measurements:
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . get job = 0 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . initial setup = 4 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . payload setup = 93 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . stage-in = 0 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . payload execution = 36847 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . stage-out = 6 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | . log creation = 1 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,423 | INFO     | ..............................
[2025-11-27 03:14:27] 2025-11-27 08:13:27,934 | INFO     | 
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | job summary report
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | --------------------------------------------------
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | PanDA job id: 6891597057
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | task id: 47493068
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | errors: (none)
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | pilot state: finished 
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | transexitcode: 0
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | exeerrorcode: 0
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | exeerrordiag: 
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | exitcode: 0
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | exitmsg: OK
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | cpuconsumptiontime: 139872 s
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | nevents: 1000
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | neventsw: 0
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | pid: 1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | pgrp: 1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | corecount: 9
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | event service: False
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | sizes: {0: 2283425, 1: 2284110, 2: 2284309, 13: 2284309, 23: 2284365, 34: 2284393, 45: 2284549, 52: 2284839, 55: 2284867, 36944: 2324807, 36945: 2324806, 36951: 23
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | --------------------------------------------------
[2025-11-27 03:14:27] 2025-11-27 08:13:27,935 | INFO     | 
[2025-11-27 03:14:27] 2025-11-27 08:13:27,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | job 6891597057 has completed (purged errors)
[2025-11-27 03:14:27] 2025-11-27 08:13:28,069 | INFO     | overall cleanup function is called
[2025-11-27 03:14:27] 2025-11-27 08:13:29,095 | INFO     | --- collectZombieJob: --- 10, [1399251]
[2025-11-27 03:14:27] 2025-11-27 08:13:29,095 | INFO     | zombie collector waiting for pid 1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:29,096 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:14:27] 2025-11-27 08:13:29,096 | INFO     | collected zombie processes
[2025-11-27 03:14:27] 2025-11-27 08:13:29,096 | INFO     | will attempt to kill all subprocesses of pid=1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:31,474 | INFO     | process IDs to be killed: [1399251] (in reverse order)
[2025-11-27 03:14:27] 2025-11-27 08:13:31,970 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:14:27] 2025-11-27 08:13:31,970 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:14:27] 2025-11-27 08:13:32,102 | INFO     | did not find any defunct processes belonging to 1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:32,235 | INFO     | did not find any defunct processes belonging to 1399251
[2025-11-27 03:14:27] 2025-11-27 08:13:32,243 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:14:27] 2025-11-27 08:13:32,243 | INFO     | ready for new job
[2025-11-27 03:14:27] 2025-11-27 08:13:32,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:14:27] 2025-11-27 08:13:32,247 | INFO     | ***************************************
[2025-11-27 03:14:27] 2025-11-27 08:13:32,247 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:14:27] 2025-11-27 08:13:32,247 | INFO     | ***************************************
[2025-11-27 03:14:27] 2025-11-27 08:13:32,247 | INFO     | 
[2025-11-27 03:14:27] 2025-11-27 08:13:32,290 | INFO     | architecture information:
[2025-11-27 03:14:27] 2025-11-27 08:13:32,320 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:14:27] 2025-11-27 08:13:32,407 | INFO     | cat /etc/os-release:
[2025-11-27 03:14:27] NAME="CentOS Linux"
[2025-11-27 03:14:27] VERSION="7 (Core)"
[2025-11-27 03:14:27] ID="centos"
[2025-11-27 03:14:27] ID_LIKE="rhel fedora"
[2025-11-27 03:14:27] VERSION_ID="7"
[2025-11-27 03:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:14:27] ANSI_COLOR="0;31"
[2025-11-27 03:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:14:27] HOME_URL="https://www.centos.org/"
[2025-11-27 03:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:14:27] 
[2025-11-27 03:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:14:27] 
[2025-11-27 03:14:27] 2025-11-27 08:13:32,408 | INFO     | ***************************************
[2025-11-27 03:14:27] 2025-11-27 08:13:32,911 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 03:14:27] 2025-11-27 08:13:32,946 | INFO     | sufficient remaining disk space (61243129856 B)
[2025-11-27 03:14:27] 2025-11-27 08:13:32,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | INFO     | update_server=False
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:14:27] 2025-11-27 08:13:32,947 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:14:27] 2025-11-27 08:13:33,136 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 03:14:27] 2025-11-27 08:13:33,137 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 03:14:27] 2025-11-27 08:13:33,137 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:14:27] 2025-11-27 08:13:33,137 | INFO     | will abort loop
[2025-11-27 03:14:27] 2025-11-27 08:13:33,300 | INFO     | all job control threads have been joined
[2025-11-27 03:14:27] 2025-11-27 08:13:33,475 | INFO     | all data control threads have been joined
[2025-11-27 03:14:27] 2025-11-27 08:13:33,928 | INFO     | all payload control threads have been joined
[2025-11-27 03:14:27] 2025-11-27 08:13:33,952 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:33,953 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,143 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,306 | INFO     | [job] control thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,434 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,481 | INFO     | [data] control thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,487 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,491 | INFO     | [job] validate thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,834 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,889 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,926 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,934 | INFO     | [payload] control thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:34,954 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:35,494 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:35,544 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:13:36,957 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:14:27] 2025-11-27 08:14:01,859 | INFO     | PID=1324745 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:14:27] 2025-11-27 08:14:01,859 | INFO     | .. there are 101 such processes running
[2025-11-27 03:14:27] 2025-11-27 08:14:01,860 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:14:27] 2025-11-27 08:14:01,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:14:27] 2025-11-27 08:14:01,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:14:27] 2025-11-27 08:14:17,670 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:14:27] 2025-11-27 08:14:19,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140153607239488)>', '<ExcThread(monitor, started 140153037256448)>']
[2025-11-27 03:14:27] 2025-11-27 08:14:20,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:14:27] 2025-11-27 08:14:20,007 | INFO     | [monitor] control thread has ended
[2025-11-27 03:14:27] 2025-11-27 08:14:24,748 | INFO     | all workflow threads have been joined
[2025-11-27 03:14:27] 2025-11-27 08:14:24,749 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:14:27] 2025-11-27 08:14:24,749 | INFO     | traces error code: 0
[2025-11-27 03:14:27] 2025-11-27 08:14:24,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:14:27] 2025-11-27 08:14:25,792 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:14:27] 2025-11-27 08:14:25,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:14:27] 2025-11-27 08:14:25,860 [wrapper] pilotpid: 1324745
[2025-11-27 03:14:27] 2025-11-27 08:14:25,879 [wrapper] Pilot exit status: 0
[2025-11-27 03:14:27] 2025-11-27 08:14:25,998 [wrapper] pandaids: 6891597057
[2025-11-27 03:14:27] 2025-11-27 08:14:26,208 [wrapper] cleanup supervisor_pilot 3013137 1324746
[2025-11-27 03:14:27] 2025-11-27 08:14:26,224 [wrapper] Test setup, not cleaning
[2025-11-27 03:14:27] 2025-11-27 08:14:26,323 [wrapper] apfmon messages muted
[2025-11-27 03:14:27] 2025-11-27 08:14:26,353 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:14:27] 2025-11-27 08:14:26,371 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:14:27]  *** Error codes and diagnostics ***
[2025-11-27 03:14:27]     "exeErrorCode": 0,
[2025-11-27 03:14:27]     "exeErrorDiag": "",
[2025-11-27 03:14:27]     "pilotErrorCode": 0,
[2025-11-27 03:14:27]     "pilotErrorDiag": "",
[2025-11-27 03:14:27]  *** Listing of results directory ***
[2025-11-27 03:14:27] total 1313620
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:48 queuedata.json
[2025-11-27 03:14:27] -rwx------. 1 boincer umatlas     36292 Nov 18 13:49 runpilot2-wrapper.sh
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:14:27] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:53 run_atlas
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:53 job.xml
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas 412112374 Nov 26 16:53 EVNT.47493065._000789.pool.root.1
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:53 start_atlas.sh
[2025-11-27 03:14:27] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:53 shared
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 16:53 input.tar.gz
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:53 boinc_lockfile
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas      2772 Nov 26 16:53 pandaJob.out
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas    991538 Nov 26 16:55 agis_schedconf.cvmfs.json
[2025-11-27 03:14:27] drwx------. 5 boincer umatlas      4096 Nov 26 16:55 pilot3
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:49 boinc_task_state.xml
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas      7171 Nov 27 03:09 init_data.xml
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas 916159337 Nov 27 03:11 HITS.47493068._006536.pool.root.1
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas      1050 Nov 27 03:12 memory_monitor_summary.json
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:12 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas   1924941 Nov 27 03:12 log.47493068._006536.job.log.tgz.1
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas      7928 Nov 27 03:13 heartbeat.json
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas        95 Nov 27 03:14 pilot_heartbeat.json
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:14 wrapper_checkpoint.txt
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas      5011 Nov 27 03:14 pilotlog.txt
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas   4553980 Nov 27 03:14 log.47493068._006536.job.log.1
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas       353 Nov 27 03:14 output.list
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:14 runtime_log
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas   6502400 Nov 27 03:14 result.tar.gz
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:14 boinc_mmap_file
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 03:14 runtime_log.err
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas       659 Nov 27 03:14 CsfLDmUwff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmBjFKDmlDMvPn.diag
[2025-11-27 03:14:27] -rw-r--r--. 1 boincer umatlas     21889 Nov 27 03:14 stderr.txt
[2025-11-27 03:14:27] HITS file was successfully produced:
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas 916159337 Nov 27 03:11 shared/HITS.pool.root.1
[2025-11-27 03:14:27]  *** Contents of shared directory: ***
[2025-11-27 03:14:27] total 1304100
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas 412112374 Nov 26 16:53 ATLAS.root_0
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:53 start_atlas.sh
[2025-11-27 03:14:27] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 16:53 input.tar.gz
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas 916159337 Nov 27 03:11 HITS.pool.root.1
[2025-11-27 03:14:27] -rw-------. 1 boincer umatlas   6502400 Nov 27 03:14 result.tar.gz
03:14:29 (1303853): run_atlas exited; CPU time 140494.945794
03:14:29 (1303853): called boinc_finish(0)

</stderr_txt>
]]>

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