Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:01:43 (2144553): wrapper (7.7.26015): starting
17:01:43 (2144553): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:01:43] Arguments: --nthreads 8
[2025-11-26 17:01:43] Threads: 8
[2025-11-26 17:01:43] Checking for CVMFS
[2025-11-26 17:01:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:01:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:01:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:01:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:01:45] 2.13.3.0 17216 30488 476720 153335 0 792 22021146 32935937 70541 16776704 0 539986511 99.679 425469236 48073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:01:45] CVMFS is ok
[2025-11-26 17:01:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:01:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:01:45] Further information can be found at the LHC@home message board.
[2025-11-26 17:01:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:01:45] Checking for apptainer binary...
[2025-11-26 17:01:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:01:45] Running /usr/bin/apptainer --version
[2025-11-26 17:01:45] apptainer version 1.4.4-1.el9
[2025-11-26 17:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:01:46] c7-9-14.aglt2.org
[2025-11-26 17:01:46] apptainer works
[2025-11-26 17:01:46] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:01:46] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:01:46] Starting ATLAS job with PandaID=6891567417
[2025-11-26 17:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:53:57]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:53:57] 2025-11-27 07:52:40,778 | INFO     | monitor loop #2057: job 0:6891567417 is in state 'finished'
[2025-11-27 02:53:57] 2025-11-27 07:52:40,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:53:57] 2025-11-27 07:52:40,841 | INFO     | time since job start (35332s) is within the limit (172800.0s)
[2025-11-27 02:53:57] 2025-11-27 07:52:42,857 | INFO     | time since job start (35334s) is within the limit (172800.0s)
[2025-11-27 02:53:57] 2025-11-27 07:52:43,286 | INFO     | monitor loop #2058: job 0:6891567417 is in state 'finished'
[2025-11-27 02:53:57] 2025-11-27 07:52:43,288 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:53:57] 2025-11-27 07:52:44,867 | INFO     | time since job start (35336s) is within the limit (172800.0s)
[2025-11-27 02:53:57] 2025-11-27 07:52:45,817 | INFO     | monitor loop #2059: job 0:6891567417 is in state 'finished'
[2025-11-27 02:53:57] 2025-11-27 07:52:45,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:53:57] 2025-11-27 07:52:46,873 | INFO     | time since job start (35338s) is within the limit (172800.0s)
[2025-11-27 02:53:57] 2025-11-27 07:52:48,333 | INFO     | monitor loop #2060: job 0:6891567417 is in state 'finished'
[2025-11-27 02:53:57] 2025-11-27 07:52:48,333 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:53:57] 2025-11-27 07:52:48,881 | INFO     | time since job start (35340s) is within the limit (172800.0s)
[2025-11-27 02:53:57] 2025-11-27 07:52:50,849 | INFO     | monitor loop #2061: job 0:6891567417 is in state 'finished'
[2025-11-27 02:53:57] 2025-11-27 07:52:50,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:53:57] 2025-11-27 07:52:52,743 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:53:57] 2025-11-27 07:52:52,847 | INFO     | PID=2167763 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:53:57] 2025-11-27 07:52:52,848 | INFO     | .. there are 116 such processes running
[2025-11-27 02:53:57] 2025-11-27 07:52:52,857 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2779921875
[2025-11-27 02:53:57] 2025-11-27 07:52:52,930 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6891567417/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:53:57] 2025-11-27 07:52:52,931 | INFO     | extracted standard info from prmon json
[2025-11-27 02:53:57] 2025-11-27 07:52:52,931 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:53:57] 2025-11-27 07:52:52,931 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:53:57] 2025-11-27 07:52:52,966 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:53:57] 2025-11-27 07:52:52,966 | INFO     | sum of square deviations: 59258748674.82623
[2025-11-27 02:53:57] 2025-11-27 07:52:52,991 | INFO     | sum of deviations: 424059562171.0277
[2025-11-27 02:53:57] 2025-11-27 07:52:52,991 | INFO     | mean x: 1764212380.2326388
[2025-11-27 02:53:57] 2025-11-27 07:52:52,991 | INFO     | mean y: 2708742.902777778
[2025-11-27 02:53:57] 2025-11-27 07:52:52,991 | INFO     | intersect: -12622112844.934324
[2025-11-27 02:53:57] 2025-11-27 07:52:52,992 | INFO     | chi2: 36.07532077789889
[2025-11-27 02:53:57] 2025-11-27 07:52:52,992 | INFO     | sum of square deviations: 57729062652.11914
[2025-11-27 02:53:57] 2025-11-27 07:52:53,015 | INFO     | sum of deviations: 599686726789.9149
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | mean x: 1764212227.7390542
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | mean y: 2726242.0665499126
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | intersect: -18323825543.31465
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | chi2: 32.72378182480616
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | current chi2=32.72378182480616 (change=9.290392658534607 %)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,016 | INFO     | right removable region: 570
[2025-11-27 02:53:57] 2025-11-27 07:52:53,017 | INFO     | sum of square deviations: 57728805232.11918
[2025-11-27 02:53:57] 2025-11-27 07:52:53,065 | INFO     | sum of deviations: 195159620841.51416
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | mean x: 1764212532.7390542
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | mean y: 2731556.8423817866
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | intersect: -5961414896.367735
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | chi2: 31.07263277882497
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | current chi2=31.07263277882497 (change=13.867341692880395 %)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,066 | INFO     | left removable region: 10
[2025-11-27 02:53:57] 2025-11-27 07:52:53,067 | INFO     | sum of square deviations: 54456397517.99243
[2025-11-27 02:53:57] 2025-11-27 07:52:53,091 | INFO     | sum of deviations: 196150769593.38992
[2025-11-27 02:53:57] 2025-11-27 07:52:53,091 | INFO     | mean x: 1764212502.2535715
[2025-11-27 02:53:57] 2025-11-27 07:52:53,091 | INFO     | mean y: 2774507.680357143
[2025-11-27 02:53:57] 2025-11-27 07:52:53,091 | INFO     | intersect: -6351880882.973836
[2025-11-27 02:53:57] 2025-11-27 07:52:53,092 | INFO     | chi2: 23.00849141160836
[2025-11-27 02:53:57] 2025-11-27 07:52:53,092 | INFO     | current memory leak: 3.60 B/s (using 560 data points, chi2=23.01)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | could have reported an average CPU frequency of 3799 MHz (23 samples)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | ..............................
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . Timing measurements:
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . get job = 0 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . initial setup = 6 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . payload setup = 72 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . stage-in = 0 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . payload execution = 35121 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . stage-out = 5 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,093 | INFO     | . log creation = 1 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,108 | INFO     | ..............................
[2025-11-27 02:53:57] 2025-11-27 07:52:53,704 | INFO     | 
[2025-11-27 02:53:57] 2025-11-27 07:52:53,704 | INFO     | job summary report
[2025-11-27 02:53:57] 2025-11-27 07:52:53,704 | INFO     | --------------------------------------------------
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | PanDA job id: 6891567417
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | task id: 47493068
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | errors: (none)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | pilot state: finished 
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | transexitcode: 0
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | exeerrorcode: 0
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | exeerrordiag: 
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | exitcode: 0
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | exitmsg: OK
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | cpuconsumptiontime: 135680 s
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | nevents: 1000
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | neventsw: 0
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | pid: 2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | pgrp: 2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | corecount: 8
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | event service: False
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | sizes: {0: 2284071, 1: 2284326, 12: 2284326, 22: 2284354, 33: 2284382, 44: 2284438, 50: 2284856, 54: 2284884, 35198: 2324208, 35204: 2333202, 35208: 2333258, 35248
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | --------------------------------------------------
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | 
[2025-11-27 02:53:57] 2025-11-27 07:52:53,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,832 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:53:57] 2025-11-27 07:52:53,833 | INFO     | job 6891567417 has completed (purged errors)
[2025-11-27 02:53:57] 2025-11-27 07:52:53,833 | INFO     | overall cleanup function is called
[2025-11-27 02:53:57] 2025-11-27 07:52:54,890 | INFO     | --- collectZombieJob: --- 10, [2201165]
[2025-11-27 02:53:57] 2025-11-27 07:52:54,890 | INFO     | zombie collector waiting for pid 2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:54,890 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:53:57] 2025-11-27 07:52:54,891 | INFO     | collected zombie processes
[2025-11-27 02:53:57] 2025-11-27 07:52:54,891 | INFO     | will attempt to kill all subprocesses of pid=2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:58,883 | INFO     | process IDs to be killed: [2201165] (in reverse order)
[2025-11-27 02:53:57] 2025-11-27 07:52:59,318 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:53:57] 2025-11-27 07:52:59,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:53:57] 2025-11-27 07:52:59,403 | INFO     | did not find any defunct processes belonging to 2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:59,507 | INFO     | did not find any defunct processes belonging to 2201165
[2025-11-27 02:53:57] 2025-11-27 07:52:59,509 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:53:57] 2025-11-27 07:52:59,510 | INFO     | ready for new job
[2025-11-27 02:53:57] 2025-11-27 07:52:59,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:53:57] 2025-11-27 07:52:59,512 | INFO     | ***************************************
[2025-11-27 02:53:57] 2025-11-27 07:52:59,512 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:53:57] 2025-11-27 07:52:59,512 | INFO     | ***************************************
[2025-11-27 02:53:57] 2025-11-27 07:52:59,512 | INFO     | 
[2025-11-27 02:53:57] 2025-11-27 07:52:59,523 | INFO     | architecture information:
[2025-11-27 02:53:57] 2025-11-27 07:52:59,530 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:53:57] 2025-11-27 07:52:59,574 | INFO     | cat /etc/os-release:
[2025-11-27 02:53:57] NAME="CentOS Linux"
[2025-11-27 02:53:57] VERSION="7 (Core)"
[2025-11-27 02:53:57] ID="centos"
[2025-11-27 02:53:57] ID_LIKE="rhel fedora"
[2025-11-27 02:53:57] VERSION_ID="7"
[2025-11-27 02:53:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:53:57] ANSI_COLOR="0;31"
[2025-11-27 02:53:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:53:57] HOME_URL="https://www.centos.org/"
[2025-11-27 02:53:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:53:57] 
[2025-11-27 02:53:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:53:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:53:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:53:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:53:57] 
[2025-11-27 02:53:57] 2025-11-27 07:52:59,575 | INFO     | ***************************************
[2025-11-27 02:53:57] 2025-11-27 07:53:00,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | INFO     | sufficient remaining disk space (55662608384 B)
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | INFO     | update_server=False
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:53:57] 2025-11-27 07:53:00,182 | INFO     | aborting loop
[2025-11-27 02:53:57] 2025-11-27 07:53:00,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:53:57] 2025-11-27 07:53:00,384 | INFO     | all payload control threads have been joined
[2025-11-27 02:53:57] 2025-11-27 07:53:00,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:53:57] 2025-11-27 07:53:00,818 | INFO     | all data control threads have been joined
[2025-11-27 02:53:57] 2025-11-27 07:53:01,092 | INFO     | all job control threads have been joined
[2025-11-27 02:53:57] 2025-11-27 07:53:01,188 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,189 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,192 | INFO     | [job] validate thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,390 | INFO     | [payload] control thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,498 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,552 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,751 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,763 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:01,825 | INFO     | [data] control thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:02,100 | INFO     | [job] control thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:02,103 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:02,470 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:02,543 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:02,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:53:57] 2025-11-27 07:53:02,752 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:03,755 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:04,382 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:53:57] 2025-11-27 07:53:26,667 | INFO     | PID=2167763 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:53:57] 2025-11-27 07:53:26,667 | INFO     | .. there are 116 such processes running
[2025-11-27 02:53:57] 2025-11-27 07:53:26,668 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:53:57] 2025-11-27 07:53:26,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:53:57] 2025-11-27 07:53:26,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:53:57] 2025-11-27 07:53:49,281 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:53:57] 2025-11-27 07:53:49,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914469705536)>', '<ExcThread(monitor, started 139913961912064)>']
[2025-11-27 02:53:57] 2025-11-27 07:53:49,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:53:57] 2025-11-27 07:53:49,908 | INFO     | [monitor] control thread has ended
[2025-11-27 02:53:57] 2025-11-27 07:53:54,338 | INFO     | all workflow threads have been joined
[2025-11-27 02:53:57] 2025-11-27 07:53:54,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:53:57] 2025-11-27 07:53:54,339 | INFO     | traces error code: 0
[2025-11-27 02:53:57] 2025-11-27 07:53:54,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:53:57] 2025-11-27 07:53:55,779 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:53:57] 2025-11-27 07:53:55,798 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:53:57] 2025-11-27 07:53:55,807 [wrapper] pilotpid: 2167763
[2025-11-27 02:53:57] 2025-11-27 07:53:55,829 [wrapper] Pilot exit status: 0
[2025-11-27 02:53:57] 2025-11-27 07:53:55,981 [wrapper] pandaids: 6891567417
[2025-11-27 02:53:57] 2025-11-27 07:53:56,304 [wrapper] cleanup supervisor_pilot  804329 2167764
[2025-11-27 02:53:57] 2025-11-27 07:53:56,369 [wrapper] Test setup, not cleaning
[2025-11-27 02:53:57] 2025-11-27 07:53:56,438 [wrapper] apfmon messages muted
[2025-11-27 02:53:57] 2025-11-27 07:53:56,463 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:53:57] 2025-11-27 07:53:56,491 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:53:57]  *** Error codes and diagnostics ***
[2025-11-27 02:53:57]     "exeErrorCode": 0,
[2025-11-27 02:53:57]     "exeErrorDiag": "",
[2025-11-27 02:53:57]     "pilotErrorCode": 0,
[2025-11-27 02:53:57]     "pilotErrorDiag": "",
[2025-11-27 02:53:57]  *** Listing of results directory ***
[2025-11-27 02:53:57] total 1307936
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-27 02:53:57] -rwx------. 1 boincer umatlas     36292 Nov 18 10:30 runpilot2-wrapper.sh
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:53:57] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:01 run_atlas
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:01 job.xml
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas 409258402 Nov 26 17:01 EVNT.47493065._000166.pool.root.1
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:01 start_atlas.sh
[2025-11-27 02:53:57] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:01 shared
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 17:01 input.tar.gz
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:01 boinc_lockfile
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas      2770 Nov 26 17:01 pandaJob.out
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas    991538 Nov 26 17:03 agis_schedconf.cvmfs.json
[2025-11-27 02:53:57] drwx------. 5 boincer umatlas      4096 Nov 26 17:03 pilot3
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:25 boinc_task_state.xml
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas      7171 Nov 27 02:47 init_data.xml
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas 913804901 Nov 27 02:50 HITS.47493068._001651.pool.root.1
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas      1053 Nov 27 02:52 memory_monitor_summary.json
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas   1796301 Nov 27 02:52 log.47493068._001651.job.log.tgz.1
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas      7907 Nov 27 02:52 heartbeat.json
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas        95 Nov 27 02:53 pilot_heartbeat.json
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:53 boinc_mmap_file
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:53 wrapper_checkpoint.txt
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas      4825 Nov 27 02:53 pilotlog.txt
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas   4375489 Nov 27 02:53 log.47493068._001651.job.log.1
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas       353 Nov 27 02:53 output.list
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:53 runtime_log
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas   6195200 Nov 27 02:53 result.tar.gz
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 02:53 runtime_log.err
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas       659 Nov 27 02:53 pa1NDmXqcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhGFKDmpg1EWn.diag
[2025-11-27 02:53:57] -rw-r--r--. 1 boincer umatlas     21891 Nov 27 02:53 stderr.txt
[2025-11-27 02:53:57] HITS file was successfully produced:
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas 913804901 Nov 27 02:50 shared/HITS.pool.root.1
[2025-11-27 02:53:57]  *** Contents of shared directory: ***
[2025-11-27 02:53:57] total 1298712
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas 409258402 Nov 26 17:01 ATLAS.root_0
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:01 start_atlas.sh
[2025-11-27 02:53:57] -rw-r--r--. 2 boincer umatlas    590100 Nov 26 17:01 input.tar.gz
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas 913804901 Nov 27 02:50 HITS.pool.root.1
[2025-11-27 02:53:57] -rw-------. 1 boincer umatlas   6195200 Nov 27 02:53 result.tar.gz
02:53:58 (2144553): run_atlas exited; CPU time 136460.191508
02:53:58 (2144553): called boinc_finish(0)

</stderr_txt>
]]>

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