Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:46:20 (351604): wrapper (7.7.26015): starting
13:46:20 (351604): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 13:46:20] Arguments: --nthreads 12
[2025-11-26 13:46:20] Threads: 12
[2025-11-26 13:46:20] Checking for CVMFS
[2025-11-26 13:46:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:46:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:46:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:46:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:46:20] 2.11.5.0 799525 28657 243392 153335 0 359 31763276 45568000 15235 130560 0 313868895 99.816 166279983 24129 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-26 13:46:20] CVMFS is ok
[2025-11-26 13:46:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:46:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:46:20] Further information can be found at the LHC@home message board.
[2025-11-26 13:46:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:46:20] Checking for apptainer binary...
[2025-11-26 13:46:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:46:20] Running /usr/bin/apptainer --version
[2025-11-26 13:46:21] apptainer version 1.4.1-1.el9
[2025-11-26 13:46:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:46:21] wns0031.triumf.lcg
[2025-11-26 13:46:21] apptainer works
[2025-11-26 13:46:21] Set ATHENA_PROC_NUMBER=12
[2025-11-26 13:46:21] Set ATHENA_CORE_NUMBER=12
[2025-11-26 13:46:21] Starting ATLAS job with PandaID=6898215358
[2025-11-26 13:46:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:50:36]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | WARNING  | wrong length of table data, x=[1764193616.0], y=[2597.0] (must be same and length>=4)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . Timing measurements:
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . get job = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . initial setup = 2 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload setup = 5 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-in = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload execution = 51 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-out = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . log creation = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898215358/pilotlog.txt
[2025-11-26 13:50:36] 2025-11-26 21:49:47,567 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 13:50:36] - Log from pilotlog.txt -
[2025-11-26 13:50:36] 2025-11-26 21:49:47,553 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | found no stored workdir sizes
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | WARNING  | wrong length of table data, x=[1764193616.0], y=[2597.0] (must be same and length>=4)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . Timing measurements:
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . get job = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . initial setup = 2 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload setup = 5 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-in = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload execution = 51 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-out = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . log creation = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898215358/pilotlog.txt
[2025-11-26 13:50:36] 2025-11-26 21:49:47,568 | WARNING  | 
[2025-11-26 13:50:36] [begin log extracts]
[2025-11-26 13:50:36] - Log from pilotlog.txt -
[2025-11-26 13:50:36] 2025-11-26 21:49:47,553 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | WARNING  | found no stored workdir sizes
[2025-11-26 13:50:36] 2025-11-26 21:49:47,554 | INFO     | will not add max space = 0 B to job metrics
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | WARNING  | wrong length of table data, x=[1764193616.0], y=[2597.0] (must be same and length>=4)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . Timing measurements:
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . get job = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,555 | INFO     | . initial setup = 2 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload setup = 5 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-in = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . payload execution = 51 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . stage-out = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | . log creation = 0 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | ..............................
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 13:50:36] 2025-11-26 21:49:47,556 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898215358/pilotlog.txt
[2025-11-26 13:50:36] [end log extracts]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,568 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,568 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | 
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | job summary report
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | --------------------------------------------------
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | PanDA job id: 6898215358
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | task id: 47556161
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 13:47:37,903 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | pilot state: failed 
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | transexitcode: 65
[2025-11-26 13:50:36] 2025-11-26 21:49:47,626 | INFO     | exeerrorcode: 65
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | exitcode: 65
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | cpuconsumptiontime: 40 s
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | nevents: 0
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | neventsw: 0
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | pid: 361882
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | pgrp: 361882
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | corecount: 12
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | event service: False
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | sizes: {0: 2284261, 3: 2284523, 11: 2284551, 60: 2309887, 61: 2314177, 63: 2314205, 183: 2314499}
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | --------------------------------------------------
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | 
[2025-11-26 13:50:36] 2025-11-26 21:49:47,627 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 13:50:36] 2025-11-26 21:49:47,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:50:36] 2025-11-26 21:49:47,646 | INFO     | job 6898215358 has completed (purged errors)
[2025-11-26 13:50:36] 2025-11-26 21:49:47,646 | INFO     | overall cleanup function is called
[2025-11-26 13:50:36] 2025-11-26 21:49:48,653 | INFO     | --- collectZombieJob: --- 10, [361882]
[2025-11-26 13:50:36] 2025-11-26 21:49:48,653 | INFO     | zombie collector waiting for pid 361882
[2025-11-26 13:50:36] 2025-11-26 21:49:48,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:50:36] 2025-11-26 21:49:48,653 | INFO     | collected zombie processes
[2025-11-26 13:50:36] 2025-11-26 21:49:48,653 | INFO     | will attempt to kill all subprocesses of pid=361882
[2025-11-26 13:50:36] 2025-11-26 21:49:48,795 | INFO     | process IDs to be killed: [361882] (in reverse order)
[2025-11-26 13:50:36] 2025-11-26 21:49:48,851 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:50:36] 2025-11-26 21:49:48,851 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:50:36] 2025-11-26 21:49:48,857 | INFO     | did not find any defunct processes belonging to 361882
[2025-11-26 13:50:36] 2025-11-26 21:49:48,863 | INFO     | did not find any defunct processes belonging to 361882
[2025-11-26 13:50:36] 2025-11-26 21:49:48,864 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:50:36] 2025-11-26 21:49:48,864 | INFO     | ready for new job
[2025-11-26 13:50:36] 2025-11-26 21:49:48,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:50:36] 2025-11-26 21:49:48,866 | INFO     | ***************************************
[2025-11-26 13:50:36] 2025-11-26 21:49:48,866 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:50:36] 2025-11-26 21:49:48,866 | INFO     | ***************************************
[2025-11-26 13:50:36] 2025-11-26 21:49:48,866 | INFO     | 
[2025-11-26 13:50:36] 2025-11-26 21:49:48,868 | INFO     | architecture information:
[2025-11-26 13:50:36] 2025-11-26 21:49:48,869 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:50:36] 2025-11-26 21:49:48,879 | INFO     | cat /etc/os-release:
[2025-11-26 13:50:36] NAME="CentOS Linux"
[2025-11-26 13:50:36] VERSION="7 (Core)"
[2025-11-26 13:50:36] ID="centos"
[2025-11-26 13:50:36] ID_LIKE="rhel fedora"
[2025-11-26 13:50:36] VERSION_ID="7"
[2025-11-26 13:50:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:50:36] ANSI_COLOR="0;31"
[2025-11-26 13:50:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:50:36] HOME_URL="https://www.centos.org/"
[2025-11-26 13:50:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:50:36] 
[2025-11-26 13:50:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:50:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:50:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:50:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:50:36] 
[2025-11-26 13:50:36] 2025-11-26 21:49:48,879 | INFO     | ***************************************
[2025-11-26 13:50:36] 2025-11-26 21:49:49,381 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 13:50:36] 2025-11-26 21:49:49,394 | INFO     | sufficient remaining disk space (2015272894464 B)
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | INFO     | update_server=False
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:50:36] 2025-11-26 21:49:49,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:50:36] 2025-11-26 21:49:49,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:50:36] 2025-11-26 21:49:49,396 | INFO     | aborting loop
[2025-11-26 13:50:36] 2025-11-26 21:49:49,783 | INFO     | all payload control threads have been joined
[2025-11-26 13:50:36] 2025-11-26 21:49:50,365 | INFO     | all data control threads have been joined
[2025-11-26 13:50:36] 2025-11-26 21:49:50,396 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,400 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,401 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,471 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,598 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,689 | INFO     | [job] validate thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,788 | INFO     | [payload] control thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,806 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,920 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:50,978 | INFO     | all job control threads have been joined
[2025-11-26 13:50:36] 2025-11-26 21:49:51,041 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:51,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:51,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:50:36] 2025-11-26 21:49:51,370 | INFO     | [data] control thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:51,397 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:51,402 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:51,983 | INFO     | [job] control thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:49:55,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:50:36] 2025-11-26 21:50:19,418 | INFO     | PID=355289 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 13:50:36] 2025-11-26 21:50:19,418 | INFO     | .. there are 17 such processes running
[2025-11-26 13:50:36] 2025-11-26 21:50:19,419 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:50:36] 2025-11-26 21:50:19,419 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:50:36] 2025-11-26 21:50:19,419 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:50:36] 2025-11-26 21:50:29,338 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:50:36] 2025-11-26 21:50:31,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139774636513088)>', '<ExcThread(monitor, started 139773863782144)>']
[2025-11-26 13:50:36] 2025-11-26 21:50:31,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:50:36] 2025-11-26 21:50:31,469 | INFO     | [monitor] control thread has ended
[2025-11-26 13:50:36] 2025-11-26 21:50:36,224 | INFO     | all workflow threads have been joined
[2025-11-26 13:50:36] 2025-11-26 21:50:36,224 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:50:36] 2025-11-26 21:50:36,224 | INFO     | traces error code: 0
[2025-11-26 13:50:36] 2025-11-26 21:50:36,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:50:36] 2025-11-26 21:50:36,373 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:50:36] 2025-11-26 21:50:36,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:50:36] 2025-11-26 21:50:36,377 [wrapper] pilotpid: 355289
[2025-11-26 13:50:36] 2025-11-26 21:50:36,379 [wrapper] Pilot exit status: 0
[2025-11-26 13:50:36] 2025-11-26 21:50:36,387 [wrapper] pandaids: 6898215358
[2025-11-26 13:50:36] 2025-11-26 21:50:36,425 [wrapper] cleanup supervisor_pilot  355295 355290
[2025-11-26 13:50:36] 2025-11-26 21:50:36,427 [wrapper] Test setup, not cleaning
[2025-11-26 13:50:36] 2025-11-26 21:50:36,429 [wrapper] apfmon messages muted
[2025-11-26 13:50:36] 2025-11-26 21:50:36,431 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:50:36] 2025-11-26 21:50:36,433 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:50:36]  *** Error codes and diagnostics ***
[2025-11-26 13:50:36]     "exeErrorCode": 65,
[2025-11-26 13:50:36]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 13:50:36]     "pilotErrorCode": 1305,
[2025-11-26 13:50:36]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 13:50:36]  *** Listing of results directory ***
[2025-11-26 13:50:36] total 404336
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc      5112 Nov 26 05:40 queuedata.json
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc    576529 Nov 26 05:40 pilot3.tar.gz
[2025-11-26 13:50:36] -rwx------. 1 boinc boinc     36292 Nov 26 05:41 runpilot2-wrapper.sh
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc       100 Nov 26 13:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:50:36] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 13:46 run_atlas
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc       105 Nov 26 13:46 job.xml
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc      6594 Nov 26 13:46 init_data.xml
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc 409842792 Nov 26 13:46 EVNT.47483658._002511.pool.root.1
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 13:46 start_atlas.sh
[2025-11-26 13:50:36] drwxrwx--x. 2 boinc boinc      4096 Nov 26 13:46 shared
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc    590103 Nov 26 13:46 input.tar.gz
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc         0 Nov 26 13:46 boinc_lockfile
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc      2785 Nov 26 13:46 pandaJob.out
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc    991538 Nov 26 13:46 agis_schedconf.cvmfs.json
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc   1516240 Nov 26 13:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:50:36] drwx------. 5 boinc boinc      4096 Nov 26 13:46 pilot3
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc       523 Nov 26 13:47 boinc_task_state.xml
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc       983 Nov 26 13:47 memory_monitor_summary.json
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc     47585 Nov 26 13:47 log.47556161._004933.job.log.tgz.1
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc        95 Nov 26 13:49 pilot_heartbeat.json
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc     10311 Nov 26 13:49 heartbeat.json
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc        23 Nov 26 13:50 wrapper_checkpoint.txt
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc      8192 Nov 26 13:50 boinc_mmap_file
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc      4822 Nov 26 13:50 pilotlog.txt
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc     91538 Nov 26 13:50 log.47556161._004933.job.log.1
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc       186 Nov 26 13:50 output.list
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc       620 Nov 26 13:50 runtime_log
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc    163840 Nov 26 13:50 result.tar.gz
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc      8636 Nov 26 13:50 runtime_log.err
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc       645 Nov 26 13:50 j6xLDm8wUi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9zMKDmhTizAo.diag
[2025-11-26 13:50:36] -rw-r--r--. 1 boinc boinc     22251 Nov 26 13:50 stderr.txt
[2025-11-26 13:50:36] No HITS result produced
[2025-11-26 13:50:36]  *** Contents of shared directory: ***
[2025-11-26 13:50:36] total 401000
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc 409842792 Nov 26 13:46 ATLAS.root_0
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc     15847 Nov 26 13:46 start_atlas.sh
[2025-11-26 13:50:36] -rw-r--r--. 2 boinc boinc    590103 Nov 26 13:46 input.tar.gz
[2025-11-26 13:50:36] -rw-------. 1 boinc boinc    163840 Nov 26 13:50 result.tar.gz
13:50:37 (351604): run_atlas exited; CPU time 38.907891
13:50:37 (351604): called boinc_finish(0)

</stderr_txt>
]]>

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