Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
19:32:55 (2846469): wrapper (7.7.26015): starting
19:32:55 (2846469): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:32:55] Arguments: --nthreads 8
[2025-11-26 19:32:55] Threads: 8
[2025-11-26 19:32:55] Checking for CVMFS
[2025-11-26 19:32:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:32:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:32:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:32:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:32:56] 2.13.2.0 3460 3270 59540 153343 1 81 3241139 4096000 3890 130560 0 7732134 99.787 1352656 893 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 19:32:56] CVMFS is ok
[2025-11-26 19:32:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:32:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 19:32:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 19:32:56] Further information can be found at the LHC@home message board.
[2025-11-26 19:32:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:32:56] Checking for apptainer binary...
[2025-11-26 19:32:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:32:56] Running /usr/bin/apptainer --version
[2025-11-26 19:32:56] apptainer version 1.4.3
[2025-11-26 19:32:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:32:56] painter
[2025-11-26 19:32:56] apptainer works
[2025-11-26 19:32:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:32:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:32:56] Starting ATLAS job with PandaID=6896557274
[2025-11-26 19:32:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:47:37]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:47:37] 2025-11-27 06:46:30,808 | INFO     | time since job start (15204s) is within the limit (172800.0s)
[2025-11-26 23:47:37] 2025-11-27 06:46:31,004 | INFO     | monitor loop #1141: job 0:6896557274 is in state 'finished'
[2025-11-26 23:47:37] 2025-11-27 06:46:31,004 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,314 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 23:47:37] 2025-11-27 06:46:32,316 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4772.80984375
[2025-11-26 23:47:37] 2025-11-27 06:46:32,319 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6896557274/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,319 | INFO     | extracted standard info from prmon json
[2025-11-26 23:47:37] 2025-11-27 06:46:32,319 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:47:37] 2025-11-27 06:46:32,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:47:37] 2025-11-27 06:46:32,321 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:47:37] 2025-11-27 06:46:32,321 | INFO     | sum of square deviations: 4786986122.056223
[2025-11-26 23:47:37] 2025-11-27 06:46:32,322 | INFO     | sum of deviations: 98838684082.62256
[2025-11-26 23:47:37] 2025-11-27 06:46:32,322 | INFO     | mean x: 1764218368.0883534
[2025-11-26 23:47:37] 2025-11-27 06:46:32,322 | INFO     | mean y: 2852337.8353413655
[2025-11-26 23:47:37] 2025-11-27 06:46:32,322 | INFO     | intersect: -36423620914.88922
[2025-11-26 23:47:37] 2025-11-27 06:46:32,322 | INFO     | chi2: 3.4072155979037935
[2025-11-26 23:47:37] 2025-11-27 06:46:32,323 | INFO     | sum of square deviations: 4504364277.016369
[2025-11-26 23:47:37] 2025-11-27 06:46:32,323 | INFO     | sum of deviations: 144090481705.72125
[2025-11-26 23:47:37] 2025-11-27 06:46:32,323 | INFO     | mean x: 1764218215.590164
[2025-11-26 23:47:37] 2025-11-27 06:46:32,323 | INFO     | mean y: 2876559.2172131147
[2025-11-26 23:47:37] 2025-11-27 06:46:32,323 | INFO     | intersect: -56432845972.26021
[2025-11-26 23:47:37] 2025-11-27 06:46:32,324 | INFO     | chi2: 1.9438463577300915
[2025-11-26 23:47:37] 2025-11-27 06:46:32,324 | INFO     | current chi2=1.9438463577300915 (change=42.949123650232295 %)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,324 | INFO     | sum of square deviations: 4233076597.154817
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | sum of deviations: 138427194570.85364
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | mean x: 1764218063.087866
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | mean y: 2873375.6736401673
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | intersect: -57689386964.86062
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | chi2: 1.9436355215613377
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | current chi2=1.9436355215613377 (change=0.01084633916232136 %)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | right removable region: 238
[2025-11-26 23:47:37] 2025-11-27 06:46:32,325 | INFO     | sum of square deviations: 4504350857.016369
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | sum of deviations: 41124726443.08205
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | mean x: 1764218520.590164
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | mean y: 2883273.450819672
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | intersect: -16104433040.968725
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | chi2: 1.5177779960492757
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | current chi2=1.5177779960492757 (change=55.45400775392518 %)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,326 | INFO     | sum of square deviations: 4233079647.154817
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | sum of deviations: 31492795867.64013
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | mean x: 1764218673.087866
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | mean y: 2888680.2552301255
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | intersect: -13122349484.062988
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | chi2: 1.5000932322716873
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | current chi2=1.5000932322716873 (change=1.165174605483882 %)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | left removable region: 20
[2025-11-26 23:47:37] 2025-11-27 06:46:32,327 | INFO     | sum of square deviations: 3212403763.0137534
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | sum of deviations: 58687422107.431175
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | mean x: 1764218642.582569
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | mean y: 2920140.5871559633
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | intersect: -32227599994.872913
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | chi2: 0.006793100393392812
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | current memory leak: 18.27 B/s (using 218 data points, chi2=0.01)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | could have reported an average CPU frequency of 4661 MHz (12 samples)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | ..............................
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | . Timing measurements:
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | . get job = 0 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | . initial setup = 5 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | . payload setup = 2 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,328 | INFO     | . stage-in = 0 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,329 | INFO     | . payload execution = 15174 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,329 | INFO     | . stage-out = 5 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,329 | INFO     | . log creation = 0 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,329 | INFO     | ..............................
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | 
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | job summary report
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | --------------------------------------------------
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | PanDA job id: 6896557274
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | task id: 47556161
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | errors: (none)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | pilot state: finished 
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | transexitcode: 0
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | exeerrorcode: 0
[2025-11-26 23:47:37] 2025-11-27 06:46:32,370 | INFO     | exeerrordiag: 
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | exitcode: 0
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | exitmsg: OK
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | cpuconsumptiontime: 108415 s
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | nevents: 1000
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | neventsw: 0
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | pid: 2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | pgrp: 2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | corecount: 8
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | event service: False
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | sizes: {0: 2284218, 2: 2284480, 11: 2284508, 15180: 2316711, 15181: 2316710, 15187: 2325774, 15190: 2325958, 15193: 2326204}
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | --------------------------------------------------
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | 
[2025-11-26 23:47:37] 2025-11-27 06:46:32,371 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | job 6896557274 has completed (purged errors)
[2025-11-26 23:47:37] 2025-11-27 06:46:32,384 | INFO     | overall cleanup function is called
[2025-11-26 23:47:37] 2025-11-27 06:46:33,395 | INFO     | --- collectZombieJob: --- 10, [2856988]
[2025-11-26 23:47:37] 2025-11-27 06:46:33,395 | INFO     | zombie collector waiting for pid 2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:33,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:47:37] 2025-11-27 06:46:33,396 | INFO     | collected zombie processes
[2025-11-26 23:47:37] 2025-11-27 06:46:33,396 | INFO     | will attempt to kill all subprocesses of pid=2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:33,457 | INFO     | process IDs to be killed: [2856988] (in reverse order)
[2025-11-26 23:47:37] 2025-11-27 06:46:33,491 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:47:37] 2025-11-27 06:46:33,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:47:37] 2025-11-27 06:46:33,494 | INFO     | did not find any defunct processes belonging to 2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:33,496 | INFO     | did not find any defunct processes belonging to 2856988
[2025-11-26 23:47:37] 2025-11-27 06:46:33,496 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:47:37] 2025-11-27 06:46:33,496 | INFO     | ready for new job
[2025-11-26 23:47:37] 2025-11-27 06:46:33,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:47:37] 2025-11-27 06:46:33,497 | INFO     | ***************************************
[2025-11-26 23:47:37] 2025-11-27 06:46:33,498 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:47:37] 2025-11-27 06:46:33,498 | INFO     | ***************************************
[2025-11-26 23:47:37] 2025-11-27 06:46:33,498 | INFO     | 
[2025-11-26 23:47:37] 2025-11-27 06:46:33,498 | INFO     | architecture information:
[2025-11-26 23:47:37] 2025-11-27 06:46:33,499 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:47:37] 2025-11-27 06:46:33,506 | INFO     | cat /etc/os-release:
[2025-11-26 23:47:37] NAME="CentOS Linux"
[2025-11-26 23:47:37] VERSION="7 (Core)"
[2025-11-26 23:47:37] ID="centos"
[2025-11-26 23:47:37] ID_LIKE="rhel fedora"
[2025-11-26 23:47:37] VERSION_ID="7"
[2025-11-26 23:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:47:37] ANSI_COLOR="0;31"
[2025-11-26 23:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:47:37] HOME_URL="https://www.centos.org/"
[2025-11-26 23:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:47:37] 
[2025-11-26 23:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:47:37] 
[2025-11-26 23:47:37] 2025-11-27 06:46:33,506 | INFO     | ***************************************
[2025-11-26 23:47:37] 2025-11-27 06:46:34,009 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | INFO     | sufficient remaining disk space (176797253632 B)
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | INFO     | update_server=False
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:47:37] 2025-11-27 06:46:34,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:47:37] 2025-11-27 06:46:34,187 | INFO     | all job control threads have been joined
[2025-11-26 23:47:37] 2025-11-27 06:46:34,479 | INFO     | all data control threads have been joined
[2025-11-26 23:47:37] 2025-11-27 06:46:34,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:47:37] 2025-11-27 06:46:34,512 | INFO     | aborting loop
[2025-11-26 23:47:37] 2025-11-27 06:46:35,025 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,025 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,038 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:47:37] 2025-11-27 06:46:35,190 | INFO     | [job] control thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,206 | INFO     | all payload control threads have been joined
[2025-11-26 23:47:37] 2025-11-27 06:46:35,214 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:47:37] 2025-11-27 06:46:35,484 | INFO     | [data] control thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,517 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,554 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,567 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,639 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:35,978 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:36,014 | INFO     | [job] validate thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:36,211 | INFO     | [payload] control thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:36,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:36,356 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:37,043 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:46:39,328 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:47:37] 2025-11-27 06:47:03,963 | INFO     | PID=2850329 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:47:37] 2025-11-27 06:47:03,963 | INFO     | .. there are 4 such processes running
[2025-11-26 23:47:37] 2025-11-27 06:47:03,964 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:47:37] 2025-11-27 06:47:03,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:47:37] 2025-11-27 06:47:03,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:47:37] 2025-11-27 06:47:31,260 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:47:37] 2025-11-27 06:47:32,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137477789882176)>', '<ExcThread(monitor, started 137477297776384)>']
[2025-11-26 23:47:37] 2025-11-27 06:47:33,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:47:37] 2025-11-27 06:47:33,105 | INFO     | [monitor] control thread has ended
[2025-11-26 23:47:37] 2025-11-27 06:47:37,321 | INFO     | all workflow threads have been joined
[2025-11-26 23:47:37] 2025-11-27 06:47:37,321 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:47:37] 2025-11-27 06:47:37,321 | INFO     | traces error code: 0
[2025-11-26 23:47:37] 2025-11-27 06:47:37,321 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:47:37] 2025-11-27 06:47:37,381 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:47:37] 2025-11-27 06:47:37,383 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:47:37] 2025-11-27 06:47:37,384 [wrapper] pilotpid: 2850329
[2025-11-26 23:47:37] 2025-11-27 06:47:37,385 [wrapper] Pilot exit status: 0
[2025-11-26 23:47:37] 2025-11-27 06:47:37,390 [wrapper] pandaids: 6896557274
[2025-11-26 23:47:37] 2025-11-27 06:47:37,412 [wrapper] cleanup supervisor_pilot 3056856 2850330
[2025-11-26 23:47:37] 2025-11-27 06:47:37,414 [wrapper] Test setup, not cleaning
[2025-11-26 23:47:37] 2025-11-27 06:47:37,415 [wrapper] apfmon messages muted
[2025-11-26 23:47:37] 2025-11-27 06:47:37,416 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:47:37] 2025-11-27 06:47:37,418 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:47:37]  *** Error codes and diagnostics ***
[2025-11-26 23:47:37]     "exeErrorCode": 0,
[2025-11-26 23:47:37]     "exeErrorDiag": "",
[2025-11-26 23:47:37]     "pilotErrorCode": 0,
[2025-11-26 23:47:37]     "pilotErrorDiag": "",
[2025-11-26 23:47:37]  *** Listing of results directory ***
[2025-11-26 23:47:37] total 1313332
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc    576529 Nov 24 21:09 pilot3.tar.gz
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc      5112 Nov 24 21:51 queuedata.json
[2025-11-26 23:47:37] -rwx------ 1 boinc boinc     36292 Nov 24 21:52 runpilot2-wrapper.sh
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc       100 Nov 26 19:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:47:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 19:32 run_atlas
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc       105 Nov 26 19:32 job.xml
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 19:32 start_atlas.sh
[2025-11-26 23:47:37] drwxrwx--x 2 boinc boinc      4096 Nov 26 19:32 shared
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc    590106 Nov 26 19:32 input.tar.gz
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc      9935 Nov 26 19:32 init_data.xml
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc 412012881 Nov 26 19:32 EVNT.47483658._002084.pool.root.1
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc         0 Nov 26 19:32 boinc_lockfile
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc      2783 Nov 26 19:32 pandaJob.out
[2025-11-26 23:47:37] -rw------- 1 boinc boinc    991554 Nov 26 19:33 agis_schedconf.cvmfs.json
[2025-11-26 23:47:37] drwx------ 5 boinc boinc      4096 Nov 26 19:33 pilot3
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc       532 Nov 26 23:41 boinc_task_state.xml
[2025-11-26 23:47:37] -rw------- 1 boinc boinc 921349486 Nov 26 23:46 HITS.47556161._000676.pool.root.1
[2025-11-26 23:47:37] -rw------- 1 boinc boinc      1045 Nov 26 23:46 memory_monitor_summary.json
[2025-11-26 23:47:37] -rw------- 1 boinc boinc   1516240 Nov 26 23:46 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:47:37] -rw------- 1 boinc boinc   1561761 Nov 26 23:46 log.47556161._000676.job.log.tgz.1
[2025-11-26 23:47:37] -rw------- 1 boinc boinc      8566 Nov 26 23:46 heartbeat.json
[2025-11-26 23:47:37] -rw------- 1 boinc boinc        95 Nov 26 23:47 pilot_heartbeat.json
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc      8192 Nov 26 23:47 boinc_mmap_file
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc        29 Nov 26 23:47 wrapper_checkpoint.txt
[2025-11-26 23:47:37] -rw------- 1 boinc boinc      4831 Nov 26 23:47 pilotlog.txt
[2025-11-26 23:47:37] -rw------- 1 boinc boinc   2220668 Nov 26 23:47 log.47556161._000676.job.log.1
[2025-11-26 23:47:37] -rw------- 1 boinc boinc       353 Nov 26 23:47 output.list
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc       620 Nov 26 23:47 runtime_log
[2025-11-26 23:47:37] -rw------- 1 boinc boinc   3799040 Nov 26 23:47 result.tar.gz
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc      8923 Nov 26 23:47 runtime_log.err
[2025-11-26 23:47:37] -rw------- 1 boinc boinc       663 Nov 26 23:47 AtmLDmeD0h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjKJKDmXucCbn.diag
[2025-11-26 23:47:37] -rw-r--r-- 1 boinc boinc     21418 Nov 26 23:47 stderr.txt
[2025-11-26 23:47:37] HITS file was successfully produced:
[2025-11-26 23:47:37] -rw------- 1 boinc boinc 921349486 Nov 26 23:46 shared/HITS.pool.root.1
[2025-11-26 23:47:37]  *** Contents of shared directory: ***
[2025-11-26 23:47:37] total 1306432
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc     15847 Nov 26 19:32 start_atlas.sh
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc    590106 Nov 26 19:32 input.tar.gz
[2025-11-26 23:47:37] -rw-r--r-- 2 boinc boinc 412012881 Nov 26 19:32 ATLAS.root_0
[2025-11-26 23:47:37] -rw------- 1 boinc boinc 921349486 Nov 26 23:46 HITS.pool.root.1
[2025-11-26 23:47:37] -rw------- 1 boinc boinc   3799040 Nov 26 23:47 result.tar.gz
23:47:38 (2846469): run_atlas exited; CPU time 108251.358656
23:47:38 (2846469): called boinc_finish(0)

</stderr_txt>
]]>

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