Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:02:32 (20419): wrapper (7.7.26015): starting
18:02:32 (20419): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:02:32] Arguments: --nthreads 8
[2025-11-26 18:02:32] Threads: 8
[2025-11-26 18:02:32] Checking for CVMFS
[2025-11-26 18:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:02:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:02:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:02:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:02:32] 2.11.2.0 26213 66241 86956 153337 1 81 18830019 20275200 1 130560 0 16585187 99.847 3711890 30542 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 18:02:32] CVMFS is ok
[2025-11-26 18:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:02:32] Further information can be found at the LHC@home message board.
[2025-11-26 18:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:02:32] Checking for apptainer binary...
[2025-11-26 18:02:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:02:32] Running /usr/bin/apptainer --version
[2025-11-26 18:02:32] apptainer version 1.3.2-1.el7
[2025-11-26 18:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:02:34] c-115-4.aglt2.org
[2025-11-26 18:02:34] apptainer works
[2025-11-26 18:02:34] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:02:34] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:02:34] Starting ATLAS job with PandaID=6896450934
[2025-11-26 18:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:00:02]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:00:02] 2025-11-27 09:59:38,508 | INFO     | time since job start (39407s) is within the limit (172800.0s)
[2025-11-27 05:00:02] 2025-11-27 09:59:38,543 | INFO     | monitor loop #2874: job 0:6896450934 is in state 'finished'
[2025-11-27 05:00:02] 2025-11-27 09:59:38,544 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,335 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 05:00:02] 2025-11-27 09:59:40,340 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-27 05:00:02] 2025-11-27 09:59:40,343 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896450934/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,343 | INFO     | extracted standard info from prmon json
[2025-11-27 05:00:02] 2025-11-27 09:59:40,344 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:00:02] 2025-11-27 09:59:40,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:00:02] 2025-11-27 09:59:40,354 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:00:02] 2025-11-27 09:59:40,355 | INFO     | sum of square deviations: 83593836474.57733
[2025-11-27 05:00:02] 2025-11-27 09:59:40,363 | INFO     | sum of deviations: 695339254964.572
[2025-11-27 05:00:02] 2025-11-27 09:59:40,363 | INFO     | mean x: 1764217876.1594427
[2025-11-27 05:00:02] 2025-11-27 09:59:40,363 | INFO     | mean y: 3169011.5866873064
[2025-11-27 05:00:02] 2025-11-27 09:59:40,363 | INFO     | intersect: -14671716067.733261
[2025-11-27 05:00:02] 2025-11-27 09:59:40,364 | INFO     | chi2: 5.583220307448085
[2025-11-27 05:00:02] 2025-11-27 09:59:40,364 | INFO     | sum of square deviations: 81667911684.88643
[2025-11-27 05:00:02] 2025-11-27 09:59:40,372 | INFO     | sum of deviations: 917768199066.2891
[2025-11-27 05:00:02] 2025-11-27 09:59:40,372 | INFO     | mean x: 1764217723.6645865
[2025-11-27 05:00:02] 2025-11-27 09:59:40,372 | INFO     | mean y: 3186608.466458658
[2025-11-27 05:00:02] 2025-11-27 09:59:40,373 | INFO     | intersect: -19822751016.28753
[2025-11-27 05:00:02] 2025-11-27 09:59:40,373 | INFO     | chi2: 2.7755270095502933
[2025-11-27 05:00:02] 2025-11-27 09:59:40,373 | INFO     | current chi2=2.7755270095502933 (change=50.28806214492904 %)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,374 | INFO     | sum of square deviations: 79771762550.9984
[2025-11-27 05:00:02] 2025-11-27 09:59:40,381 | INFO     | sum of deviations: 954799819277.7356
[2025-11-27 05:00:02] 2025-11-27 09:59:40,382 | INFO     | mean x: 1764217571.1682389
[2025-11-27 05:00:02] 2025-11-27 09:59:40,382 | INFO     | mean y: 3189577.2641509436
[2025-11-27 05:00:02] 2025-11-27 09:59:40,382 | INFO     | intersect: -21112986927.43761
[2025-11-27 05:00:02] 2025-11-27 09:59:40,382 | INFO     | chi2: 2.5895773104097985
[2025-11-27 05:00:02] 2025-11-27 09:59:40,383 | INFO     | current chi2=2.5895773104097985 (change=6.699617712263711 %)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,383 | INFO     | right removable region: 635
[2025-11-27 05:00:02] 2025-11-27 09:59:40,383 | INFO     | sum of square deviations: 81667651824.88637
[2025-11-27 05:00:02] 2025-11-27 09:59:40,391 | INFO     | sum of deviations: 497223479529.57666
[2025-11-27 05:00:02] 2025-11-27 09:59:40,391 | INFO     | mean x: 1764218028.6645865
[2025-11-27 05:00:02] 2025-11-27 09:59:40,392 | INFO     | mean y: 3184665.932917317
[2025-11-27 05:00:02] 2025-11-27 09:59:40,392 | INFO     | intersect: -10738040375.560268
[2025-11-27 05:00:02] 2025-11-27 09:59:40,392 | INFO     | chi2: 3.199618645358079
[2025-11-27 05:00:02] 2025-11-27 09:59:40,393 | INFO     | current chi2=3.199618645358079 (change=42.69223729019347 %)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,393 | INFO     | sum of square deviations: 79771281687.66176
[2025-11-27 05:00:02] 2025-11-27 09:59:40,401 | INFO     | sum of deviations: 447396193724.99963
[2025-11-27 05:00:02] 2025-11-27 09:59:40,401 | INFO     | mean x: 1764218181.1698112
[2025-11-27 05:00:02] 2025-11-27 09:59:40,401 | INFO     | mean y: 3188671.0833333335
[2025-11-27 05:00:02] 2025-11-27 09:59:40,401 | INFO     | intersect: -9891406005.811487
[2025-11-27 05:00:02] 2025-11-27 09:59:40,402 | INFO     | chi2: 3.1259087162790014
[2025-11-27 05:00:02] 2025-11-27 09:59:40,402 | INFO     | current chi2=3.1259087162790014 (change=2.30370982448218 %)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,402 | INFO     | left removable region: 20
[2025-11-27 05:00:02] 2025-11-27 09:59:40,403 | INFO     | sum of square deviations: 72127654416.60817
[2025-11-27 05:00:02] 2025-11-27 09:59:40,410 | INFO     | sum of deviations: 637516838362.8699
[2025-11-27 05:00:02] 2025-11-27 09:59:40,410 | INFO     | mean x: 1764218150.6764228
[2025-11-27 05:00:02] 2025-11-27 09:59:40,410 | INFO     | mean y: 3215383.5772357723
[2025-11-27 05:00:02] 2025-11-27 09:59:40,410 | INFO     | intersect: -15590231910.65009
[2025-11-27 05:00:02] 2025-11-27 09:59:40,411 | INFO     | chi2: 0.07157943999354115
[2025-11-27 05:00:02] 2025-11-27 09:59:40,411 | INFO     | current memory leak: 8.84 B/s (using 615 data points, chi2=0.07)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,412 | INFO     | could have reported an average CPU frequency of 2411 MHz (25 samples)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,412 | INFO     | ..............................
[2025-11-27 05:00:02] 2025-11-27 09:59:40,412 | INFO     | . Timing measurements:
[2025-11-27 05:00:02] 2025-11-27 09:59:40,412 | INFO     | . get job = 0 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,412 | INFO     | . initial setup = 2 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | . payload setup = 8 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | . stage-in = 0 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | . payload execution = 39365 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | . stage-out = 3 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | . log creation = 0 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,413 | INFO     | ..............................
[2025-11-27 05:00:02] 2025-11-27 09:59:40,494 | INFO     | 
[2025-11-27 05:00:02] 2025-11-27 09:59:40,494 | INFO     | job summary report
[2025-11-27 05:00:02] 2025-11-27 09:59:40,495 | INFO     | --------------------------------------------------
[2025-11-27 05:00:02] 2025-11-27 09:59:40,495 | INFO     | PanDA job id: 6896450934
[2025-11-27 05:00:02] 2025-11-27 09:59:40,495 | INFO     | task id: 47556161
[2025-11-27 05:00:02] 2025-11-27 09:59:40,495 | INFO     | errors: (none)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | pilot state: finished 
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | transexitcode: 0
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | exeerrorcode: 0
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | exeerrordiag: 
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | exitcode: 0
[2025-11-27 05:00:02] 2025-11-27 09:59:40,496 | INFO     | exitmsg: OK
[2025-11-27 05:00:02] 2025-11-27 09:59:40,497 | INFO     | cpuconsumptiontime: 307486 s
[2025-11-27 05:00:02] 2025-11-27 09:59:40,497 | INFO     | nevents: 1000
[2025-11-27 05:00:02] 2025-11-27 09:59:40,497 | INFO     | neventsw: 0
[2025-11-27 05:00:02] 2025-11-27 09:59:40,497 | INFO     | pid: 30621
[2025-11-27 05:00:02] 2025-11-27 09:59:40,497 | INFO     | pgrp: 30621
[2025-11-27 05:00:02] 2025-11-27 09:59:40,498 | INFO     | corecount: 8
[2025-11-27 05:00:02] 2025-11-27 09:59:40,498 | INFO     | event service: False
[2025-11-27 05:00:02] 2025-11-27 09:59:40,498 | INFO     | sizes: {0: 2284040, 1: 2284239, 6: 2284501, 11: 2284529, 39378: 2327809, 39383: 2336803, 39385: 2336987, 39392: 2337297}
[2025-11-27 05:00:02] 2025-11-27 09:59:40,498 | INFO     | --------------------------------------------------
[2025-11-27 05:00:02] 2025-11-27 09:59:40,498 | INFO     | 
[2025-11-27 05:00:02] 2025-11-27 09:59:40,499 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:00:02] 2025-11-27 09:59:40,514 | INFO     | time since job start (39409s) is within the limit (172800.0s)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,527 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,531 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,531 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,531 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,531 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:00:02] 2025-11-27 09:59:40,531 | INFO     | job 6896450934 has completed (purged errors)
[2025-11-27 05:00:02] 2025-11-27 09:59:40,532 | INFO     | overall cleanup function is called
[2025-11-27 05:00:02] 2025-11-27 09:59:41,545 | INFO     | --- collectZombieJob: --- 10, [30621]
[2025-11-27 05:00:02] 2025-11-27 09:59:41,546 | INFO     | zombie collector waiting for pid 30621
[2025-11-27 05:00:02] 2025-11-27 09:59:41,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:00:02] 2025-11-27 09:59:41,546 | INFO     | collected zombie processes
[2025-11-27 05:00:02] 2025-11-27 09:59:41,546 | INFO     | will attempt to kill all subprocesses of pid=30621
[2025-11-27 05:00:02] 2025-11-27 09:59:41,632 | INFO     | process IDs to be killed: [30621] (in reverse order)
[2025-11-27 05:00:02] 2025-11-27 09:59:41,691 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:00:02] 2025-11-27 09:59:41,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:00:02] 2025-11-27 09:59:41,695 | INFO     | did not find any defunct processes belonging to 30621
[2025-11-27 05:00:02] 2025-11-27 09:59:41,699 | INFO     | did not find any defunct processes belonging to 30621
[2025-11-27 05:00:02] 2025-11-27 09:59:41,701 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:00:02] 2025-11-27 09:59:41,702 | INFO     | ready for new job
[2025-11-27 05:00:02] 2025-11-27 09:59:41,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:00:02] 2025-11-27 09:59:41,705 | INFO     | ***************************************
[2025-11-27 05:00:02] 2025-11-27 09:59:41,705 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:00:02] 2025-11-27 09:59:41,705 | INFO     | ***************************************
[2025-11-27 05:00:02] 2025-11-27 09:59:41,706 | INFO     | 
[2025-11-27 05:00:02] 2025-11-27 09:59:41,706 | INFO     | architecture information:
[2025-11-27 05:00:02] 2025-11-27 09:59:41,707 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:00:02] 2025-11-27 09:59:41,725 | INFO     | cat /etc/os-release:
[2025-11-27 05:00:02] NAME="CentOS Linux"
[2025-11-27 05:00:02] VERSION="7 (Core)"
[2025-11-27 05:00:02] ID="centos"
[2025-11-27 05:00:02] ID_LIKE="rhel fedora"
[2025-11-27 05:00:02] VERSION_ID="7"
[2025-11-27 05:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:00:02] ANSI_COLOR="0;31"
[2025-11-27 05:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:00:02] HOME_URL="https://www.centos.org/"
[2025-11-27 05:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:00:02] 
[2025-11-27 05:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:00:02] 
[2025-11-27 05:00:02] 2025-11-27 09:59:41,726 | INFO     | ***************************************
[2025-11-27 05:00:02] 2025-11-27 09:59:42,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:00:02] 2025-11-27 09:59:42,250 | INFO     | sufficient remaining disk space (17490247680 B)
[2025-11-27 05:00:02] 2025-11-27 09:59:42,250 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:00:02] 2025-11-27 09:59:42,250 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:00:02] 2025-11-27 09:59:42,251 | INFO     | update_server=False
[2025-11-27 05:00:02] 2025-11-27 09:59:42,251 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:00:02] 2025-11-27 09:59:42,251 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:00:02] 2025-11-27 09:59:42,252 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:00:02] 2025-11-27 09:59:42,252 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:00:02] 2025-11-27 09:59:42,252 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:00:02] 2025-11-27 09:59:42,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:00:02] 2025-11-27 09:59:42,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:00:02] 2025-11-27 09:59:42,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:00:02] 2025-11-27 09:59:42,253 | INFO     | aborting loop
[2025-11-27 05:00:02] 2025-11-27 09:59:42,606 | INFO     | all data control threads have been joined
[2025-11-27 05:00:02] 2025-11-27 09:59:43,177 | INFO     | all payload control threads have been joined
[2025-11-27 05:00:02] 2025-11-27 09:59:43,257 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,257 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,259 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,410 | INFO     | all job control threads have been joined
[2025-11-27 05:00:02] 2025-11-27 09:59:43,611 | INFO     | [data] control thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,720 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,741 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:43,766 | INFO     | [job] validate thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,117 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,182 | INFO     | [payload] control thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,206 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,257 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,416 | INFO     | [job] control thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,450 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:00:02] 2025-11-27 09:59:44,741 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:44,810 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:48,610 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:00:02] 2025-11-27 09:59:56,558 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:00:02] 2025-11-27 09:59:56,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140141793466176)>', '<ExcThread(monitor, started 140141041522432)>']
[2025-11-27 05:00:02] 2025-11-27 09:59:57,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:00:02] 2025-11-27 09:59:57,324 | INFO     | [monitor] control thread has ended
[2025-11-27 05:00:02] 2025-11-27 10:00:01,934 | INFO     | all workflow threads have been joined
[2025-11-27 05:00:02] 2025-11-27 10:00:01,934 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:00:02] 2025-11-27 10:00:01,934 | INFO     | traces error code: 0
[2025-11-27 05:00:02] 2025-11-27 10:00:01,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:00:02] 2025-11-27 10:00:02,034 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:00:02] 2025-11-27 10:00:02,039 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:00:02] 2025-11-27 10:00:02,043 [wrapper] pilotpid: 24174
[2025-11-27 05:00:02] 2025-11-27 10:00:02,047 [wrapper] Pilot exit status: 0
[2025-11-27 05:00:02] 2025-11-27 10:00:02,062 [wrapper] pandaids: 6896450934
[2025-11-27 05:00:02] 2025-11-27 10:00:02,100 [wrapper] cleanup supervisor_pilot  2792 24175
[2025-11-27 05:00:02] 2025-11-27 10:00:02,104 [wrapper] Test setup, not cleaning
[2025-11-27 05:00:02] 2025-11-27 10:00:02,109 [wrapper] apfmon messages muted
[2025-11-27 05:00:02] 2025-11-27 10:00:02,114 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:00:02] 2025-11-27 10:00:02,119 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:00:02]  *** Error codes and diagnostics ***
[2025-11-27 05:00:02]     "exeErrorCode": 0,
[2025-11-27 05:00:02]     "exeErrorDiag": "",
[2025-11-27 05:00:02]     "pilotErrorCode": 0,
[2025-11-27 05:00:02]     "pilotErrorDiag": "",
[2025-11-27 05:00:02]  *** Listing of results directory ***
[2025-11-27 05:00:02] total 1302484
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 23:09 pilot3.tar.gz
[2025-11-27 05:00:02] -rwx------ 1 boincer umatlas     36292 Nov 24 23:10 runpilot2-wrapper.sh
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 23:10 queuedata.json
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas       100 Nov 26 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:00:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 18:02 run_atlas
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas       105 Nov 26 18:02 job.xml
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas 408743367 Nov 26 18:02 EVNT.47483658._002080.pool.root.1
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 18:02 input.tar.gz
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:02 start_atlas.sh
[2025-11-27 05:00:02] drwxrwx--x 2 boincer umatlas      4096 Nov 26 18:02 shared
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas         0 Nov 26 18:02 boinc_lockfile
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas      2783 Nov 26 18:02 pandaJob.out
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas        57 Nov 26 18:02 setup.sh.local
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas    991546 Nov 26 18:02 agis_schedconf.cvmfs.json
[2025-11-27 05:00:02] drwx------ 5 boincer umatlas      4096 Nov 26 18:02 pilot3
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas       533 Nov 27 04:50 boinc_task_state.xml
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 04:58 init_data.xml
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas 906415844 Nov 27 04:58 HITS.47556161._000632.pool.root.1
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas        95 Nov 27 04:59 pilot_heartbeat.json
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas      1064 Nov 27 04:59 memory_monitor_summary.json
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas   1516240 Nov 27 04:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas   1908194 Nov 27 04:59 log.47556161._000632.job.log.tgz.1
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas      8652 Nov 27 04:59 heartbeat.json
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:59 boinc_mmap_file
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:59 wrapper_checkpoint.txt
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas      4552 Nov 27 05:00 pilotlog.txt
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas   5428671 Nov 27 05:00 log.47556161._000632.job.log.1
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas       353 Nov 27 05:00 output.list
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas       620 Nov 27 05:00 runtime_log
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas   7352320 Nov 27 05:00 result.tar.gz
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas       666 Nov 27 05:00 wfCLDmMZzh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmbJJKDm6A652n.diag
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 05:00 runtime_log.err
[2025-11-27 05:00:02] -rw-r--r-- 1 boincer umatlas     21233 Nov 27 05:00 stderr.txt
[2025-11-27 05:00:02] HITS file was successfully produced:
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas 906415844 Nov 27 04:58 shared/HITS.pool.root.1
[2025-11-27 05:00:02]  *** Contents of shared directory: ***
[2025-11-27 05:00:02] total 1292116
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas 408743367 Nov 26 18:02 ATLAS.root_0
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 18:02 input.tar.gz
[2025-11-27 05:00:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 18:02 start_atlas.sh
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas 906415844 Nov 27 04:58 HITS.pool.root.1
[2025-11-27 05:00:02] -rw------- 1 boincer umatlas   7352320 Nov 27 05:00 result.tar.gz
05:00:03 (20419): run_atlas exited; CPU time 305831.521978
05:00:03 (20419): called boinc_finish(0)

</stderr_txt>
]]>

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