Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:55 (1816328): wrapper (7.7.26015): starting
17:20:55 (1816328): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:20:55] Arguments: --nthreads 8
[2025-11-26 17:20:55] Threads: 8
[2025-11-26 17:20:55] Checking for CVMFS
[2025-11-26 17:20:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:20:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:20:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:20:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:20:56] 2.13.3.0 12548 30640 356632 153337 3 113 29198178 40960000 32795 16776704 34 152684510 99.623 143372040 35453 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:20:56] CVMFS is ok
[2025-11-26 17:20:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:20:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:20:56] Further information can be found at the LHC@home message board.
[2025-11-26 17:20:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:20:56] Checking for apptainer binary...
[2025-11-26 17:20:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:20:56] Running /usr/bin/apptainer --version
[2025-11-26 17:20:56] apptainer version 1.4.4-1.el9
[2025-11-26 17:20:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:20:57] c7-11-12.aglt2.org
[2025-11-26 17:20:57] apptainer works
[2025-11-26 17:20:57] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:20:57] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:20:57] Starting ATLAS job with PandaID=6892537123
[2025-11-26 17:20:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 09:41:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 09:41:28] 2025-11-27 14:40:40,685 | INFO     | monitor loop #3764: job 0:6892537123 is in state 'finished'
[2025-11-27 09:41:28] 2025-11-27 14:40:40,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 09:41:28] 2025-11-27 14:40:40,970 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 09:41:28] 2025-11-27 14:40:40,974 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3292.1084218749997
[2025-11-27 09:41:28] 2025-11-27 14:40:40,985 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6892537123/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 09:41:28] 2025-11-27 14:40:40,986 | INFO     | extracted standard info from prmon json
[2025-11-27 09:41:28] 2025-11-27 14:40:40,986 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 09:41:28] 2025-11-27 14:40:40,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 09:41:28] 2025-11-27 14:40:41,045 | INFO     | fitting pss+swap vs Time
[2025-11-27 09:41:28] 2025-11-27 14:40:41,047 | INFO     | sum of square deviations: 275215737590.5588
[2025-11-27 09:41:28] 2025-11-27 14:40:41,082 | INFO     | sum of deviations: 1535780697862.0825
[2025-11-27 09:41:28] 2025-11-27 14:40:41,083 | INFO     | mean x: 1764225081.3995838
[2025-11-27 09:41:28] 2025-11-27 14:40:41,083 | INFO     | mean y: 2921475.2081165453
[2025-11-27 09:41:28] 2025-11-27 14:40:41,083 | INFO     | intersect: -9841947319.063152
[2025-11-27 09:41:28] 2025-11-27 14:40:41,084 | INFO     | chi2: 4.896165147783322
[2025-11-27 09:41:28] 2025-11-27 14:40:41,085 | INFO     | sum of square deviations: 270942932800.7139
[2025-11-27 09:41:28] 2025-11-27 14:40:41,126 | INFO     | sum of deviations: 1770942508996.5796
[2025-11-27 09:41:28] 2025-11-27 14:40:41,126 | INFO     | mean x: 1764224928.9069037
[2025-11-27 09:41:28] 2025-11-27 14:40:41,126 | INFO     | mean y: 2929860.6244769874
[2025-11-27 09:41:28] 2025-11-27 14:40:41,126 | INFO     | intersect: -11528431705.948452
[2025-11-27 09:41:28] 2025-11-27 14:40:41,127 | INFO     | chi2: 3.0883791053409255
[2025-11-27 09:41:28] 2025-11-27 14:40:41,127 | INFO     | current chi2=3.0883791053409255 (change=36.92248908844199 %)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,128 | INFO     | sum of square deviations: 266714243703.69965
[2025-11-27 09:41:28] 2025-11-27 14:40:41,151 | INFO     | time since job start (58741s) is within the limit (172800.0s)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,167 | INFO     | sum of deviations: 1757512150455.8677
[2025-11-27 09:41:28] 2025-11-27 14:40:41,167 | INFO     | mean x: 1764224776.4079916
[2025-11-27 09:41:28] 2025-11-27 14:40:41,168 | INFO     | mean y: 2929374.96424816
[2025-11-27 09:41:28] 2025-11-27 14:40:41,168 | INFO     | intersect: -11622420803.622114
[2025-11-27 09:41:28] 2025-11-27 14:40:41,168 | INFO     | chi2: 3.0767397803611405
[2025-11-27 09:41:28] 2025-11-27 14:40:41,169 | INFO     | current chi2=3.0767397803611405 (change=0.3768748778171835 %)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,169 | INFO     | right removable region: 950
[2025-11-27 09:41:28] 2025-11-27 14:40:41,170 | INFO     | sum of square deviations: 270942112350.71405
[2025-11-27 09:41:28] 2025-11-27 14:40:41,222 | INFO     | sum of deviations: 1227382186089.1826
[2025-11-27 09:41:28] 2025-11-27 14:40:41,223 | INFO     | mean x: 1764225233.9069037
[2025-11-27 09:41:28] 2025-11-27 14:40:41,223 | INFO     | mean y: 2932470.9571129708
[2025-11-27 09:41:28] 2025-11-27 14:40:41,223 | INFO     | intersect: -7989101715.088636
[2025-11-27 09:41:28] 2025-11-27 14:40:41,239 | INFO     | chi2: 2.135793709275989
[2025-11-27 09:41:28] 2025-11-27 14:40:41,239 | INFO     | current chi2=2.135793709275989 (change=56.378233886923866 %)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,240 | INFO     | sum of square deviations: 266713186576.06354
[2025-11-27 09:41:28] 2025-11-27 14:40:41,305 | INFO     | sum of deviations: 1161908468767.9172
[2025-11-27 09:41:28] 2025-11-27 14:40:41,306 | INFO     | mean x: 1764225386.4100947
[2025-11-27 09:41:28] 2025-11-27 14:40:41,306 | INFO     | mean y: 2934831.4668769715
[2025-11-27 09:41:28] 2025-11-27 14:40:41,306 | INFO     | intersect: -7682730971.56473
[2025-11-27 09:41:28] 2025-11-27 14:40:41,307 | INFO     | chi2: 2.0739515220283704
[2025-11-27 09:41:28] 2025-11-27 14:40:41,307 | INFO     | current chi2=2.0739515220283704 (change=2.8955131283995836 %)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,307 | INFO     | left removable region: 20
[2025-11-27 09:41:28] 2025-11-27 14:40:41,308 | INFO     | sum of square deviations: 249432843367.0281
[2025-11-27 09:41:28] 2025-11-27 14:40:41,376 | INFO     | sum of deviations: 1301133083715.8293
[2025-11-27 09:41:28] 2025-11-27 14:40:41,376 | INFO     | mean x: 1764225355.9268818
[2025-11-27 09:41:28] 2025-11-27 14:40:41,376 | INFO     | mean y: 2945814.5268817204
[2025-11-27 09:41:28] 2025-11-27 14:40:41,376 | INFO     | intersect: -9199899916.37431
[2025-11-27 09:41:28] 2025-11-27 14:40:41,377 | INFO     | chi2: 0.2183485181517949
[2025-11-27 09:41:28] 2025-11-27 14:40:41,377 | INFO     | current memory leak: 5.22 B/s (using 930 data points, chi2=0.22)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,378 | INFO     | could have reported an average CPU frequency of 3275 MHz (36 samples)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,378 | INFO     | ..............................
[2025-11-27 09:41:28] 2025-11-27 14:40:41,378 | INFO     | . Timing measurements:
[2025-11-27 09:41:28] 2025-11-27 14:40:41,378 | INFO     | . get job = 0 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,378 | INFO     | . initial setup = 4 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | . payload setup = 30 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | . stage-in = 0 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | . payload execution = 58634 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | . stage-out = 6 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | . log creation = 1 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,379 | INFO     | ..............................
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | 
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | job summary report
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | --------------------------------------------------
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | PanDA job id: 6892537123
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | task id: 47493029
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | errors: (none)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | pilot state: finished 
[2025-11-27 09:41:28] 2025-11-27 14:40:41,520 | INFO     | transexitcode: 0
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | exeerrorcode: 0
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | exeerrordiag: 
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | exitcode: 0
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | exitmsg: OK
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | cpuconsumptiontime: 195689 s
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | nevents: 1000
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | neventsw: 0
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | pid: 1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | pgrp: 1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | corecount: 8
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | event service: False
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | sizes: {0: 2284127, 1: 2284326, 12: 2284326, 23: 2284616, 34: 2284644, 58669: 2337245, 58676: 2346323, 58688: 2346513}
[2025-11-27 09:41:28] 2025-11-27 14:40:41,521 | INFO     | --------------------------------------------------
[2025-11-27 09:41:28] 2025-11-27 14:40:41,522 | INFO     | 
[2025-11-27 09:41:28] 2025-11-27 14:40:41,522 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | job 6892537123 has completed (purged errors)
[2025-11-27 09:41:28] 2025-11-27 14:40:41,577 | INFO     | overall cleanup function is called
[2025-11-27 09:41:28] 2025-11-27 14:40:42,597 | INFO     | --- collectZombieJob: --- 10, [1828229]
[2025-11-27 09:41:28] 2025-11-27 14:40:42,597 | INFO     | zombie collector waiting for pid 1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:42,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 09:41:28] 2025-11-27 14:40:42,597 | INFO     | collected zombie processes
[2025-11-27 09:41:28] 2025-11-27 14:40:42,597 | INFO     | will attempt to kill all subprocesses of pid=1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:43,551 | INFO     | process IDs to be killed: [1828229] (in reverse order)
[2025-11-27 09:41:28] 2025-11-27 14:40:43,810 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 09:41:28] 2025-11-27 14:40:43,811 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 09:41:28] 2025-11-27 14:40:43,883 | INFO     | did not find any defunct processes belonging to 1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:43,940 | INFO     | did not find any defunct processes belonging to 1828229
[2025-11-27 09:41:28] 2025-11-27 14:40:43,941 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 09:41:28] 2025-11-27 14:40:43,941 | INFO     | ready for new job
[2025-11-27 09:41:28] 2025-11-27 14:40:43,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 09:41:28] 2025-11-27 14:40:43,951 | INFO     | ***************************************
[2025-11-27 09:41:28] 2025-11-27 14:40:43,951 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 09:41:28] 2025-11-27 14:40:43,951 | INFO     | ***************************************
[2025-11-27 09:41:28] 2025-11-27 14:40:43,951 | INFO     | 
[2025-11-27 09:41:28] 2025-11-27 14:40:43,959 | INFO     | architecture information:
[2025-11-27 09:41:28] 2025-11-27 14:40:43,967 | INFO     | executing command: cat /etc/os-release
[2025-11-27 09:41:28] 2025-11-27 14:40:43,992 | INFO     | cat /etc/os-release:
[2025-11-27 09:41:28] NAME="CentOS Linux"
[2025-11-27 09:41:28] VERSION="7 (Core)"
[2025-11-27 09:41:28] ID="centos"
[2025-11-27 09:41:28] ID_LIKE="rhel fedora"
[2025-11-27 09:41:28] VERSION_ID="7"
[2025-11-27 09:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 09:41:28] ANSI_COLOR="0;31"
[2025-11-27 09:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 09:41:28] HOME_URL="https://www.centos.org/"
[2025-11-27 09:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 09:41:28] 
[2025-11-27 09:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 09:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 09:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 09:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 09:41:28] 
[2025-11-27 09:41:28] 2025-11-27 14:40:43,996 | INFO     | ***************************************
[2025-11-27 09:41:28] 2025-11-27 14:40:44,500 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 09:41:28] 2025-11-27 14:40:44,529 | INFO     | sufficient remaining disk space (78770077696 B)
[2025-11-27 09:41:28] 2025-11-27 14:40:44,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 09:41:28] 2025-11-27 14:40:44,529 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 09:41:28] 2025-11-27 14:40:44,529 | INFO     | update_server=False
[2025-11-27 09:41:28] 2025-11-27 14:40:44,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 09:41:28] 2025-11-27 14:40:44,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:41:28] 2025-11-27 14:40:44,530 | INFO     | aborting loop
[2025-11-27 09:41:28] 2025-11-27 14:40:44,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 09:41:28] 2025-11-27 14:40:44,796 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 09:41:28] 2025-11-27 14:40:45,042 | INFO     | all job control threads have been joined
[2025-11-27 09:41:28] 2025-11-27 14:40:45,535 | INFO     | [job] retrieve thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:45,553 | INFO     | [job] job monitor thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:45,636 | INFO     | all data control threads have been joined
[2025-11-27 09:41:28] 2025-11-27 14:40:45,692 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:45,795 | INFO     | [payload] failed_post thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:45,832 | INFO     | all payload control threads have been joined
[2025-11-27 09:41:28] 2025-11-27 14:40:46,001 | INFO     | [payload] validate_post thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,050 | INFO     | [job] control thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,092 | INFO     | [job] validate thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,092 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,136 | INFO     | [data] copytool_in thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 09:41:28] 2025-11-27 14:40:46,642 | INFO     | [data] control thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,803 | INFO     | [data] copytool_out thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,829 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:46,839 | INFO     | [payload] control thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:47,543 | INFO     | [job] queue monitor thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:40:48,539 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 09:41:28] 2025-11-27 14:41:14,999 | INFO     | PID=1820264 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 09:41:28] 2025-11-27 14:41:14,999 | INFO     | .. there are 48 such processes running
[2025-11-27 09:41:28] 2025-11-27 14:41:15,000 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 09:41:28] 2025-11-27 14:41:15,000 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 09:41:28] 2025-11-27 14:41:15,000 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 09:41:28] 2025-11-27 14:41:22,263 | INFO     | [monitor] cgroup control has ended
[2025-11-27 09:41:28] 2025-11-27 14:41:22,537 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026423330624)>', '<ExcThread(monitor, started 140026151147264)>']
[2025-11-27 09:41:28] 2025-11-27 14:41:23,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 09:41:28] 2025-11-27 14:41:23,044 | INFO     | [monitor] control thread has ended
[2025-11-27 09:41:28] 2025-11-27 14:41:27,571 | INFO     | all workflow threads have been joined
[2025-11-27 09:41:28] 2025-11-27 14:41:27,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 09:41:28] 2025-11-27 14:41:27,571 | INFO     | traces error code: 0
[2025-11-27 09:41:28] 2025-11-27 14:41:27,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 09:41:28] 2025-11-27 14:41:27,812 [wrapper] ==== pilot stdout END ====
[2025-11-27 09:41:28] 2025-11-27 14:41:27,814 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 09:41:28] 2025-11-27 14:41:27,816 [wrapper] pilotpid: 1820264
[2025-11-27 09:41:28] 2025-11-27 14:41:27,819 [wrapper] Pilot exit status: 0
[2025-11-27 09:41:28] 2025-11-27 14:41:27,889 [wrapper] pandaids: 6892537123
[2025-11-27 09:41:28] 2025-11-27 14:41:28,401 [wrapper] cleanup supervisor_pilot 1976219 1820265
[2025-11-27 09:41:28] 2025-11-27 14:41:28,405 [wrapper] Test setup, not cleaning
[2025-11-27 09:41:28] 2025-11-27 14:41:28,466 [wrapper] apfmon messages muted
[2025-11-27 09:41:28] 2025-11-27 14:41:28,494 [wrapper] ==== wrapper stdout END ====
[2025-11-27 09:41:28] 2025-11-27 14:41:28,497 [wrapper] ==== wrapper stderr END ====
[2025-11-27 09:41:28]  *** Error codes and diagnostics ***
[2025-11-27 09:41:28]     "exeErrorCode": 0,
[2025-11-27 09:41:28]     "exeErrorDiag": "",
[2025-11-27 09:41:28]     "pilotErrorCode": 0,
[2025-11-27 09:41:28]     "pilotErrorDiag": "",
[2025-11-27 09:41:28]  *** Listing of results directory ***
[2025-11-27 09:41:28] total 1307480
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:27 queuedata.json
[2025-11-27 09:41:28] -rwx------. 1 boincer umatlas     36292 Nov 19 02:27 runpilot2-wrapper.sh
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:27 pilot3.tar.gz
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 09:41:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:20 run_atlas
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:20 job.xml
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas 409920514 Nov 26 17:20 EVNT.47493027._000208.pool.root.1
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:20 start_atlas.sh
[2025-11-27 09:41:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:20 shared
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 17:20 input.tar.gz
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:20 boinc_lockfile
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas      2770 Nov 26 17:20 pandaJob.out
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas    991546 Nov 26 17:21 agis_schedconf.cvmfs.json
[2025-11-27 09:41:28] drwx------. 5 boincer umatlas      4096 Nov 26 17:21 pilot3
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:33 boinc_task_state.xml
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas 905368829 Nov 27 09:39 HITS.47493029._002031.pool.root.1
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas      1049 Nov 27 09:40 memory_monitor_summary.json
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:40 agis_ddmendpoints.agis.ALL.json
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas   2124228 Nov 27 09:40 log.47493029._002031.job.log.tgz.1
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas      8574 Nov 27 09:40 heartbeat.json
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas      6904 Nov 27 09:40 init_data.xml
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas        95 Nov 27 09:41 pilot_heartbeat.json
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 09:41 boinc_mmap_file
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas      4824 Nov 27 09:41 pilotlog.txt
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 09:41 wrapper_checkpoint.txt
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas   7701896 Nov 27 09:41 log.47493029._002031.job.log.1
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas       353 Nov 27 09:41 output.list
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 09:41 runtime_log
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas   9840640 Nov 27 09:41 result.tar.gz
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 09:41 runtime_log.err
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas       660 Nov 27 09:41 kMPKDmhmrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmD0FKDmnWWYWm.diag
[2025-11-27 09:41:28] -rw-r--r--. 1 boincer umatlas     21350 Nov 27 09:41 stderr.txt
[2025-11-27 09:41:28] HITS file was successfully produced:
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas 905368829 Nov 27 09:39 shared/HITS.pool.root.1
[2025-11-27 09:41:28]  *** Contents of shared directory: ***
[2025-11-27 09:41:28] total 1294684
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas 409920514 Nov 26 17:20 ATLAS.root_0
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 17:20 start_atlas.sh
[2025-11-27 09:41:28] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 17:20 input.tar.gz
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas 905368829 Nov 27 09:39 HITS.pool.root.1
[2025-11-27 09:41:28] -rw-------. 1 boincer umatlas   9840640 Nov 27 09:41 result.tar.gz
09:41:30 (1816328): run_atlas exited; CPU time 196422.768440
09:41:30 (1816328): called boinc_finish(0)

</stderr_txt>
]]>

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