Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:40:49 (4972): wrapper (7.7.26015): starting
16:40:49 (4972): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:40:49] Arguments: --nthreads 8
[2025-11-26 16:40:49] Threads: 8
[2025-11-26 16:40:49] Checking for CVMFS
[2025-11-26 16:40:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:40:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:40:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:40:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:40:49] 2.11.2.0 2913 47972 80168 153335 2 82 18598693 20275201 1 130560 0 7469431 99.676 2973131 28445 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 16:40:49] CVMFS is ok
[2025-11-26 16:40:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:40:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:40:49] Further information can be found at the LHC@home message board.
[2025-11-26 16:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:40:49] Checking for apptainer binary...
[2025-11-26 16:40:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:40:49] Running /usr/bin/apptainer --version
[2025-11-26 16:40:49] apptainer version 1.3.2-1.el7
[2025-11-26 16:40:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:40:51] c-204-29.aglt2.org
[2025-11-26 16:40:51] apptainer works
[2025-11-26 16:40:51] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:40:51] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:40:51] Starting ATLAS job with PandaID=6891588204
[2025-11-26 16:40:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:57:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:57:34] 2025-11-27 09:56:59,147 | INFO     | time since job start (44150s) is within the limit (172800.0s)
[2025-11-27 04:57:34] 2025-11-27 09:57:00,227 | INFO     | monitor loop #3244: job 0:6891588204 is in state 'finished'
[2025-11-27 04:57:34] 2025-11-27 09:57:00,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:57:34] 2025-11-27 09:57:01,153 | INFO     | time since job start (44152s) is within the limit (172800.0s)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,146 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 04:57:34] 2025-11-27 09:57:02,150 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-27 04:57:34] 2025-11-27 09:57:02,153 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891588204/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,154 | INFO     | extracted standard info from prmon json
[2025-11-27 04:57:34] 2025-11-27 09:57:02,154 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:57:34] 2025-11-27 09:57:02,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:57:34] 2025-11-27 09:57:02,168 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:57:34] 2025-11-27 09:57:02,169 | INFO     | sum of square deviations: 117677922148.34665
[2025-11-27 04:57:34] 2025-11-27 09:57:02,185 | INFO     | sum of deviations: 805971959286.2247
[2025-11-27 04:57:34] 2025-11-27 09:57:02,185 | INFO     | mean x: 1764215354.142265
[2025-11-27 04:57:34] 2025-11-27 09:57:02,185 | INFO     | mean y: 3153996.8522099447
[2025-11-27 04:57:34] 2025-11-27 09:57:02,186 | INFO     | intersect: -12079895054.510223
[2025-11-27 04:57:34] 2025-11-27 09:57:02,186 | INFO     | chi2: 6.437873934183097
[2025-11-27 04:57:34] 2025-11-27 09:57:02,187 | INFO     | sum of square deviations: 115256790666.26967
[2025-11-27 04:57:34] 2025-11-27 09:57:02,198 | INFO     | sum of deviations: 1102574275838.6028
[2025-11-27 04:57:34] 2025-11-27 09:57:02,198 | INFO     | mean x: 1764215201.6467316
[2025-11-27 04:57:34] 2025-11-27 09:57:02,198 | INFO     | mean y: 3172679.80945758
[2025-11-27 04:57:34] 2025-11-27 09:57:02,198 | INFO     | intersect: -16873735718.685135
[2025-11-27 04:57:34] 2025-11-27 09:57:02,199 | INFO     | chi2: 2.624629672519014
[2025-11-27 04:57:34] 2025-11-27 09:57:02,199 | INFO     | current chi2=2.624629672519014 (change=59.23142174960818 %)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,200 | INFO     | sum of square deviations: 112869014198.26347
[2025-11-27 04:57:34] 2025-11-27 09:57:02,211 | INFO     | sum of deviations: 1129864000855.8176
[2025-11-27 04:57:34] 2025-11-27 09:57:02,211 | INFO     | mean x: 1764215049.1484594
[2025-11-27 04:57:34] 2025-11-27 09:57:02,211 | INFO     | mean y: 3174410.1526610646
[2025-11-27 04:57:34] 2025-11-27 09:57:02,211 | INFO     | intersect: -17657324248.04851
[2025-11-27 04:57:34] 2025-11-27 09:57:02,212 | INFO     | chi2: 2.418468457449623
[2025-11-27 04:57:34] 2025-11-27 09:57:02,212 | INFO     | current chi2=2.418468457449623 (change=7.854868716451177 %)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,212 | INFO     | right removable region: 713
[2025-11-27 04:57:34] 2025-11-27 09:57:02,213 | INFO     | sum of square deviations: 115256507016.2698
[2025-11-27 04:57:34] 2025-11-27 09:57:02,224 | INFO     | sum of deviations: 586534948671.643
[2025-11-27 04:57:34] 2025-11-27 09:57:02,224 | INFO     | mean x: 1764215506.6467316
[2025-11-27 04:57:34] 2025-11-27 09:57:02,224 | INFO     | mean y: 3167795.230876217
[2025-11-27 04:57:34] 2025-11-27 09:57:02,224 | INFO     | intersect: -8974842023.257607
[2025-11-27 04:57:34] 2025-11-27 09:57:02,225 | INFO     | chi2: 4.189484138429497
[2025-11-27 04:57:34] 2025-11-27 09:57:02,225 | INFO     | current chi2=4.189484138429497 (change=34.92441477947173 %)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,226 | INFO     | sum of square deviations: 112868534371.66396
[2025-11-27 04:57:34] 2025-11-27 09:57:02,237 | INFO     | sum of deviations: 540305757734.5966
[2025-11-27 04:57:34] 2025-11-27 09:57:02,237 | INFO     | mean x: 1764215659.1512606
[2025-11-27 04:57:34] 2025-11-27 09:57:02,237 | INFO     | mean y: 3170745.6148459385
[2025-11-27 04:57:34] 2025-11-27 09:57:02,237 | INFO     | intersect: -8442193445.844621
[2025-11-27 04:57:34] 2025-11-27 09:57:02,238 | INFO     | chi2: 4.144854511378101
[2025-11-27 04:57:34] 2025-11-27 09:57:02,238 | INFO     | current chi2=4.144854511378101 (change=1.0652773844401373 %)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,238 | INFO     | left removable region: 20
[2025-11-27 04:57:34] 2025-11-27 09:57:02,239 | INFO     | sum of square deviations: 103199702677.63069
[2025-11-27 04:57:34] 2025-11-27 09:57:02,249 | INFO     | sum of deviations: 811870999577.8401
[2025-11-27 04:57:34] 2025-11-27 09:57:02,249 | INFO     | mean x: 1764215628.6594517
[2025-11-27 04:57:34] 2025-11-27 09:57:02,249 | INFO     | mean y: 3194812.367965368
[2025-11-27 04:57:34] 2025-11-27 09:57:02,249 | INFO     | intersect: -13875871393.711926
[2025-11-27 04:57:34] 2025-11-27 09:57:02,250 | INFO     | chi2: 0.08412252809464896
[2025-11-27 04:57:34] 2025-11-27 09:57:02,250 | INFO     | current memory leak: 7.87 B/s (using 693 data points, chi2=0.08)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,251 | INFO     | could have reported an average CPU frequency of 2159 MHz (28 samples)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,251 | INFO     | ..............................
[2025-11-27 04:57:34] 2025-11-27 09:57:02,251 | INFO     | . Timing measurements:
[2025-11-27 04:57:34] 2025-11-27 09:57:02,251 | INFO     | . get job = 0 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . initial setup = 2 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . payload setup = 9 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . stage-in = 0 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . payload execution = 44110 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . stage-out = 3 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | . log creation = 0 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,252 | INFO     | ..............................
[2025-11-27 04:57:34] 2025-11-27 09:57:02,346 | INFO     | 
[2025-11-27 04:57:34] 2025-11-27 09:57:02,346 | INFO     | job summary report
[2025-11-27 04:57:34] 2025-11-27 09:57:02,346 | INFO     | --------------------------------------------------
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | PanDA job id: 6891588204
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | task id: 47493068
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | errors: (none)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | pilot state: finished 
[2025-11-27 04:57:34] 2025-11-27 09:57:02,347 | INFO     | transexitcode: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:02,348 | INFO     | exeerrorcode: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:02,348 | INFO     | exeerrordiag: 
[2025-11-27 04:57:34] 2025-11-27 09:57:02,348 | INFO     | exitcode: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:02,348 | INFO     | exitmsg: OK
[2025-11-27 04:57:34] 2025-11-27 09:57:02,348 | INFO     | cpuconsumptiontime: 343411 s
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | nevents: 1000
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | neventsw: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | pid: 15152
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | pgrp: 15152
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | corecount: 8
[2025-11-27 04:57:34] 2025-11-27 09:57:02,349 | INFO     | event service: False
[2025-11-27 04:57:34] 2025-11-27 09:57:02,350 | INFO     | sizes: {0: 2284304, 6: 2284566, 11: 2284594, 44123: 2330229, 44128: 2339223, 44129: 2339279, 44135: 2339653}
[2025-11-27 04:57:34] 2025-11-27 09:57:02,350 | INFO     | --------------------------------------------------
[2025-11-27 04:57:34] 2025-11-27 09:57:02,350 | INFO     | 
[2025-11-27 04:57:34] 2025-11-27 09:57:02,350 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:57:34] 2025-11-27 09:57:02,379 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,379 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,379 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,380 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,381 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,383 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:57:34] 2025-11-27 09:57:02,383 | INFO     | job 6891588204 has completed (purged errors)
[2025-11-27 04:57:34] 2025-11-27 09:57:02,383 | INFO     | overall cleanup function is called
[2025-11-27 04:57:34] 2025-11-27 09:57:03,399 | INFO     | --- collectZombieJob: --- 10, [15152]
[2025-11-27 04:57:34] 2025-11-27 09:57:03,399 | INFO     | zombie collector waiting for pid 15152
[2025-11-27 04:57:34] 2025-11-27 09:57:03,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:57:34] 2025-11-27 09:57:03,400 | INFO     | collected zombie processes
[2025-11-27 04:57:34] 2025-11-27 09:57:03,400 | INFO     | will attempt to kill all subprocesses of pid=15152
[2025-11-27 04:57:34] 2025-11-27 09:57:03,488 | INFO     | process IDs to be killed: [15152] (in reverse order)
[2025-11-27 04:57:34] 2025-11-27 09:57:03,547 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:57:34] 2025-11-27 09:57:03,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:57:34] 2025-11-27 09:57:03,552 | INFO     | did not find any defunct processes belonging to 15152
[2025-11-27 04:57:34] 2025-11-27 09:57:03,556 | INFO     | did not find any defunct processes belonging to 15152
[2025-11-27 04:57:34] 2025-11-27 09:57:03,559 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:57:34] 2025-11-27 09:57:03,559 | INFO     | ready for new job
[2025-11-27 04:57:34] 2025-11-27 09:57:03,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:57:34] 2025-11-27 09:57:03,562 | INFO     | ***************************************
[2025-11-27 04:57:34] 2025-11-27 09:57:03,562 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:57:34] 2025-11-27 09:57:03,562 | INFO     | ***************************************
[2025-11-27 04:57:34] 2025-11-27 09:57:03,563 | INFO     | 
[2025-11-27 04:57:34] 2025-11-27 09:57:03,563 | INFO     | architecture information:
[2025-11-27 04:57:34] 2025-11-27 09:57:03,564 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:57:34] 2025-11-27 09:57:03,582 | INFO     | cat /etc/os-release:
[2025-11-27 04:57:34] NAME="CentOS Linux"
[2025-11-27 04:57:34] VERSION="7 (Core)"
[2025-11-27 04:57:34] ID="centos"
[2025-11-27 04:57:34] ID_LIKE="rhel fedora"
[2025-11-27 04:57:34] VERSION_ID="7"
[2025-11-27 04:57:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:57:34] ANSI_COLOR="0;31"
[2025-11-27 04:57:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:57:34] HOME_URL="https://www.centos.org/"
[2025-11-27 04:57:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:57:34] 
[2025-11-27 04:57:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:57:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:57:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:57:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:57:34] 
[2025-11-27 04:57:34] 2025-11-27 09:57:03,582 | INFO     | ***************************************
[2025-11-27 04:57:34] 2025-11-27 09:57:04,086 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:57:34] 2025-11-27 09:57:04,108 | INFO     | sufficient remaining disk space (17459838976 B)
[2025-11-27 04:57:34] 2025-11-27 09:57:04,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:57:34] 2025-11-27 09:57:04,109 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:57:34] 2025-11-27 09:57:04,109 | INFO     | update_server=False
[2025-11-27 04:57:34] 2025-11-27 09:57:04,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:57:34] 2025-11-27 09:57:04,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:57:34] 2025-11-27 09:57:04,110 | INFO     | aborting loop
[2025-11-27 04:57:34] 2025-11-27 09:57:04,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:57:34] 2025-11-27 09:57:04,226 | INFO     | all data control threads have been joined
[2025-11-27 04:57:34] 2025-11-27 09:57:04,396 | INFO     | all payload control threads have been joined
[2025-11-27 04:57:34] 2025-11-27 09:57:05,113 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,115 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,115 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,231 | INFO     | [data] control thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,239 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,344 | INFO     | all job control threads have been joined
[2025-11-27 04:57:34] 2025-11-27 09:57:05,401 | INFO     | [payload] control thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,480 | INFO     | [job] validate thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:57:34] 2025-11-27 09:57:05,689 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,717 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,758 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:05,954 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:06,206 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:06,350 | INFO     | [job] control thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:06,703 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:06,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:57:34] 2025-11-27 09:57:07,599 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:10,844 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:57:34] 2025-11-27 09:57:21,966 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:57:34] 2025-11-27 09:57:23,611 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445674944320)>', '<ExcThread(monitor, started 140444985960192)>']
[2025-11-27 04:57:34] 2025-11-27 09:57:28,613 | INFO     | all workflow threads have been joined
[2025-11-27 04:57:34] 2025-11-27 09:57:28,613 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:57:34] 2025-11-27 09:57:28,619 | INFO     | traces error code: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:28,619 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:57:34] 2025-11-27 09:57:34,387 | INFO     | PID=8694 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 04:57:34] 2025-11-27 09:57:34,395 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:57:34] 2025-11-27 09:57:34,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:57:34] 2025-11-27 09:57:34,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:57:34] 2025-11-27 09:57:34,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:57:34] 2025-11-27 09:57:34,396 | INFO     | [monitor] control thread has ended
[2025-11-27 04:57:34] 2025-11-27 09:57:34,502 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:57:34] 2025-11-27 09:57:34,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:57:34] 2025-11-27 09:57:34,511 [wrapper] pilotpid: 8694
[2025-11-27 04:57:34] 2025-11-27 09:57:34,516 [wrapper] Pilot exit status: 0
[2025-11-27 04:57:34] 2025-11-27 09:57:34,532 [wrapper] pandaids: 6891588204
[2025-11-27 04:57:34] 2025-11-27 09:57:34,571 [wrapper] cleanup supervisor_pilot 13708 8695
[2025-11-27 04:57:34] 2025-11-27 09:57:34,576 [wrapper] Test setup, not cleaning
[2025-11-27 04:57:34] 2025-11-27 09:57:34,581 [wrapper] apfmon messages muted
[2025-11-27 04:57:34] 2025-11-27 09:57:34,586 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:57:34] 2025-11-27 09:57:34,591 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:57:34]  *** Error codes and diagnostics ***
[2025-11-27 04:57:34]     "exeErrorCode": 0,
[2025-11-27 04:57:34]     "exeErrorDiag": "",
[2025-11-27 04:57:34]     "pilotErrorCode": 0,
[2025-11-27 04:57:34]     "pilotErrorDiag": "",
[2025-11-27 04:57:34]  *** Listing of results directory ***
[2025-11-27 04:57:34] total 1316560
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 12:39 queuedata.json
[2025-11-27 04:57:34] -rwx------ 1 boincer umatlas     36292 Nov 18 12:40 runpilot2-wrapper.sh
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas       100 Nov 26 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:57:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 16:40 run_atlas
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas       105 Nov 26 16:40 job.xml
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas 410156869 Nov 26 16:40 EVNT.47493065._000514.pool.root.1
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 16:40 start_atlas.sh
[2025-11-27 04:57:34] drwxrwx--x 2 boincer umatlas      4096 Nov 26 16:40 shared
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 16:40 input.tar.gz
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas         0 Nov 26 16:40 boinc_lockfile
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 16:40 pandaJob.out
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas    991538 Nov 26 16:41 agis_schedconf.cvmfs.json
[2025-11-27 04:57:34] drwx------ 5 boincer umatlas      4096 Nov 26 16:41 pilot3
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas       532 Nov 27 04:49 boinc_task_state.xml
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 04:54 init_data.xml
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas 918000999 Nov 27 04:56 HITS.47493068._005132.pool.root.1
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas      1062 Nov 27 04:56 memory_monitor_summary.json
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas   1516240 Nov 27 04:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas   1970636 Nov 27 04:56 log.47493068._005132.job.log.tgz.1
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas      8659 Nov 27 04:57 heartbeat.json
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 04:57 boinc_mmap_file
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas        29 Nov 27 04:57 wrapper_checkpoint.txt
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas        95 Nov 27 04:57 pilot_heartbeat.json
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas       744 Nov 27 04:57 pilotlog.txt
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas   6073543 Nov 27 04:57 log.47493068._005132.job.log.1
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas       353 Nov 27 04:57 output.list
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas       620 Nov 27 04:57 runtime_log
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas   8058880 Nov 27 04:57 result.tar.gz
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas      8704 Nov 27 04:57 runtime_log.err
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas       668 Nov 27 04:57 42iKDmaref8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYbFKDm1JHUjn.diag
[2025-11-27 04:57:34] -rw-r--r-- 1 boincer umatlas     21294 Nov 27 04:57 stderr.txt
[2025-11-27 04:57:34] HITS file was successfully produced:
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas 918000999 Nov 27 04:56 shared/HITS.pool.root.1
[2025-11-27 04:57:34]  *** Contents of shared directory: ***
[2025-11-27 04:57:34] total 1305508
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas 410156869 Nov 26 16:40 ATLAS.root_0
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 16:40 start_atlas.sh
[2025-11-27 04:57:34] -rw-r--r-- 2 boincer umatlas    590096 Nov 26 16:40 input.tar.gz
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas 918000999 Nov 27 04:56 HITS.pool.root.1
[2025-11-27 04:57:34] -rw------- 1 boincer umatlas   8058880 Nov 27 04:57 result.tar.gz
04:57:35 (4972): run_atlas exited; CPU time 341092.959798
04:57:35 (4972): called boinc_finish(0)

</stderr_txt>
]]>

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