Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:47:20 (3298464): wrapper (7.7.26015): starting
16:47:20 (3298464): wrapper: running run_atlas (--nthreads 11)
[2025-11-26 16:47:20] Arguments: --nthreads 11
[2025-11-26 16:47:20] Threads: 11
[2025-11-26 16:47:20] Checking for CVMFS
[2025-11-26 16:47:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:47:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:47:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:47:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:47:20] 2.13.3.0 6673 8137 297636 153335 2 1026 25355588 32935937 57618 16776704 0 77672833 99.747 50537892 30431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:47:20] CVMFS is ok
[2025-11-26 16:47:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:47:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:47:20] Further information can be found at the LHC@home message board.
[2025-11-26 16:47:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:47:20] Checking for apptainer binary...
[2025-11-26 16:47:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:47:20] Running /usr/bin/apptainer --version
[2025-11-26 16:47:20] apptainer version 1.4.4-1.el9
[2025-11-26 16:47:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:47:41] lc-10-9.aglt2.org
[2025-11-26 16:47:41] apptainer works
[2025-11-26 16:47:41] Set ATHENA_PROC_NUMBER=11
[2025-11-26 16:47:41] Set ATHENA_CORE_NUMBER=11
[2025-11-26 16:47:41] Starting ATLAS job with PandaID=6896990099
[2025-11-26 16:47:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:57:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:57:54] 2025-11-27 09:38:55,125 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:57:54] 2025-11-27 09:38:55,126 | INFO     | sum of square deviations: 105457202899.38805
[2025-11-27 06:57:54] 2025-11-27 09:38:55,164 | INFO     | sum of deviations: 839359039314.7203
[2025-11-27 06:57:54] 2025-11-27 09:38:55,165 | INFO     | mean x: 1764215027.1676219
[2025-11-27 06:57:54] 2025-11-27 09:38:55,165 | INFO     | mean y: 3300120.164756447
[2025-11-27 06:57:54] 2025-11-27 09:38:55,165 | INFO     | intersect: -14038508211.891823
[2025-11-27 06:57:54] 2025-11-27 09:38:55,166 | INFO     | chi2: 11.913871975855388
[2025-11-27 06:57:54] 2025-11-27 09:38:55,167 | INFO     | sum of square deviations: 103208071679.14565
[2025-11-27 06:57:54] 2025-11-27 09:38:55,200 | INFO     | sum of deviations: 1123417360776.1736
[2025-11-27 06:57:54] 2025-11-27 09:38:55,200 | INFO     | mean x: 1764214874.6940837
[2025-11-27 06:57:54] 2025-11-27 09:38:55,200 | INFO     | mean y: 3319369.3593073594
[2025-11-27 06:57:54] 2025-11-27 09:38:55,201 | INFO     | intersect: -19200116816.643677
[2025-11-27 06:57:54] 2025-11-27 09:38:55,201 | INFO     | chi2: 8.264963622869082
[2025-11-27 06:57:54] 2025-11-27 09:38:55,202 | INFO     | current chi2=8.264963622869082 (change=30.62739267621115 %)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,202 | INFO     | sum of square deviations: 100991131475.85896
[2025-11-27 06:57:54] 2025-11-27 09:38:55,250 | INFO     | sum of deviations: 1415489597878.6833
[2025-11-27 06:57:54] 2025-11-27 09:38:55,250 | INFO     | mean x: 1764214722.2194767
[2025-11-27 06:57:54] 2025-11-27 09:38:55,250 | INFO     | mean y: 3339459.949127907
[2025-11-27 06:57:54] 2025-11-27 09:38:55,250 | INFO     | intersect: -24723857386.271378
[2025-11-27 06:57:54] 2025-11-27 09:38:55,263 | INFO     | chi2: 4.582620684614962
[2025-11-27 06:57:54] 2025-11-27 09:38:55,264 | INFO     | current chi2=4.582620684614962 (change=44.5536496744536 %)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,264 | INFO     | sum of square deviations: 98805939974.56233
[2025-11-27 06:57:54] 2025-11-27 09:38:55,306 | INFO     | sum of deviations: 1526976757972.579
[2025-11-27 06:57:54] 2025-11-27 09:38:55,306 | INFO     | mean x: 1764214569.7364569
[2025-11-27 06:57:54] 2025-11-27 09:38:55,306 | INFO     | mean y: 3347222.6032210835
[2025-11-27 06:57:54] 2025-11-27 09:38:55,306 | INFO     | intersect: -27261356141.968925
[2025-11-27 06:57:54] 2025-11-27 09:38:55,320 | INFO     | chi2: 3.762065063979374
[2025-11-27 06:57:54] 2025-11-27 09:38:55,321 | INFO     | current chi2=3.762065063979374 (change=17.90581584442293 %)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,321 | INFO     | right removable region: 682
[2025-11-27 06:57:54] 2025-11-27 09:38:55,322 | INFO     | sum of square deviations: 103206510079.1456
[2025-11-27 06:57:54] 2025-11-27 09:38:55,358 | INFO     | sum of deviations: 563058038600.3094
[2025-11-27 06:57:54] 2025-11-27 09:38:55,358 | INFO     | mean x: 1764215179.6940837
[2025-11-27 06:57:54] 2025-11-27 09:38:55,359 | INFO     | mean y: 3318831.6854256853
[2025-11-27 06:57:54] 2025-11-27 09:38:55,359 | INFO     | intersect: -9621612173.012558
[2025-11-27 06:57:54] 2025-11-27 09:38:55,360 | INFO     | chi2: 8.871856830896325
[2025-11-27 06:57:54] 2025-11-27 09:38:55,360 | INFO     | current chi2=8.871856830896325 (change=25.533387895421406 %)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,374 | INFO     | sum of square deviations: 100988219294.16264
[2025-11-27 06:57:54] 2025-11-27 09:38:55,407 | INFO     | sum of deviations: 466520609411.2555
[2025-11-27 06:57:54] 2025-11-27 09:38:55,407 | INFO     | mean x: 1764215332.2151163
[2025-11-27 06:57:54] 2025-11-27 09:38:55,408 | INFO     | mean y: 3325460.052325581
[2025-11-27 06:57:54] 2025-11-27 09:38:55,408 | INFO     | intersect: -8146563880.211054
[2025-11-27 06:57:54] 2025-11-27 09:38:55,423 | INFO     | chi2: 8.526377519142843
[2025-11-27 06:57:54] 2025-11-27 09:38:55,423 | INFO     | current chi2=8.526377519142843 (change=3.894103774875488 %)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,423 | INFO     | left removable region: 20
[2025-11-27 06:57:54] 2025-11-27 09:38:55,424 | INFO     | sum of square deviations: 89968033038.10864
[2025-11-27 06:57:54] 2025-11-27 09:38:55,470 | INFO     | sum of deviations: 1049666365417.9918
[2025-11-27 06:57:54] 2025-11-27 09:38:55,470 | INFO     | mean x: 1764215149.3202417
[2025-11-27 06:57:54] 2025-11-27 09:38:55,470 | INFO     | mean y: 3382427.806646526
[2025-11-27 06:57:54] 2025-11-27 09:38:55,471 | INFO     | intersect: -20579898556.20616
[2025-11-27 06:57:54] 2025-11-27 09:38:55,471 | INFO     | chi2: 0.1599643666797294
[2025-11-27 06:57:54] 2025-11-27 09:38:55,472 | INFO     | current memory leak: 11.67 B/s (using 662 data points, chi2=0.16)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | could have reported an average CPU frequency of 2682 MHz (27 samples)
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | ..............................
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . Timing measurements:
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . get job = 0 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . initial setup = 3 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . payload setup = 20 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . stage-in = 0 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . payload execution = 42541 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . stage-out = 14 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | . log creation = 2 s
[2025-11-27 06:57:54] 2025-11-27 09:38:55,473 | INFO     | ..............................
[2025-11-27 06:57:54] 2025-11-27 09:38:56,051 | INFO     | 
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | job summary report
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | --------------------------------------------------
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | PanDA job id: 6896990099
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | task id: 47556161
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | errors: (none)
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | pilot state: finished 
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | transexitcode: 0
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | exeerrorcode: 0
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | exeerrordiag: 
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | exitcode: 0
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | exitmsg: OK
[2025-11-27 06:57:54] 2025-11-27 09:38:56,052 | INFO     | cpuconsumptiontime: 263919 s
[2025-11-27 06:57:54] 2025-11-27 09:38:56,053 | INFO     | nevents: 1000
[2025-11-27 06:57:54] 2025-11-27 09:38:56,053 | INFO     | neventsw: 0
[2025-11-27 06:57:54] 2025-11-27 09:38:56,053 | INFO     | pid: 3323553
[2025-11-27 06:57:54] 2025-11-27 09:38:56,053 | INFO     | pgrp: 3323553
[2025-11-27 06:57:54] 2025-11-27 09:38:56,053 | INFO     | corecount: 11
[2025-11-27 06:57:54] 2025-11-27 09:38:56,058 | INFO     | event service: False
[2025-11-27 06:57:54] 2025-11-27 09:38:56,058 | INFO     | sizes: {0: 2284042, 1: 2284241, 12: 2284241, 15: 2284531, 23: 2284559, 42564: 2327206, 42581: 2336200, 42583: 2336256, 42606: 2336502}
[2025-11-27 06:57:54] 2025-11-27 09:38:56,058 | INFO     | --------------------------------------------------
[2025-11-27 06:57:54] 2025-11-27 09:38:56,058 | INFO     | 
[2025-11-27 06:57:54] 2025-11-27 09:38:56,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 06:57:54] 2025-11-27 09:38:56,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | job 6896990099 has completed (purged errors)
[2025-11-27 06:57:54] 2025-11-27 09:38:56,194 | INFO     | overall cleanup function is called
[2025-11-27 06:57:54] 2025-11-27 09:38:57,322 | INFO     | --- collectZombieJob: --- 10, [3323553]
[2025-11-27 06:57:54] 2025-11-27 09:38:57,322 | INFO     | zombie collector waiting for pid 3323553
[2025-11-27 06:57:54] 2025-11-27 09:38:57,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:57:54] 2025-11-27 09:38:57,322 | INFO     | collected zombie processes
[2025-11-27 06:57:54] 2025-11-27 09:38:57,323 | INFO     | will attempt to kill all subprocesses of pid=3323553
[2025-11-27 06:57:54] 2025-11-27 09:39:00,567 | INFO     | process IDs to be killed: [3323553] (in reverse order)
[2025-11-27 06:57:54] 2025-11-27 09:39:00,950 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:57:54] 2025-11-27 09:39:00,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:57:54] 2025-11-27 09:39:00,988 | INFO     | did not find any defunct processes belonging to 3323553
[2025-11-27 06:57:54] 2025-11-27 09:39:01,041 | INFO     | did not find any defunct processes belonging to 3323553
[2025-11-27 06:57:54] 2025-11-27 09:39:01,059 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:57:54] 2025-11-27 09:39:01,060 | INFO     | ready for new job
[2025-11-27 06:57:54] 2025-11-27 09:39:01,060 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:57:54] 2025-11-27 09:39:01,073 | INFO     | ***************************************
[2025-11-27 06:57:54] 2025-11-27 09:39:01,073 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:57:54] 2025-11-27 09:39:01,073 | INFO     | ***************************************
[2025-11-27 06:57:54] 2025-11-27 09:39:01,073 | INFO     | 
[2025-11-27 06:57:54] 2025-11-27 09:39:01,090 | INFO     | architecture information:
[2025-11-27 06:57:54] 2025-11-27 09:39:01,106 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:57:54] 2025-11-27 09:39:01,164 | INFO     | cat /etc/os-release:
[2025-11-27 06:57:54] NAME="CentOS Linux"
[2025-11-27 06:57:54] VERSION="7 (Core)"
[2025-11-27 06:57:54] ID="centos"
[2025-11-27 06:57:54] ID_LIKE="rhel fedora"
[2025-11-27 06:57:54] VERSION_ID="7"
[2025-11-27 06:57:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:57:54] ANSI_COLOR="0;31"
[2025-11-27 06:57:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:57:54] HOME_URL="https://www.centos.org/"
[2025-11-27 06:57:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:57:54] 
[2025-11-27 06:57:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:57:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:57:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:57:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:57:54] 
[2025-11-27 06:57:54] 2025-11-27 09:39:01,165 | INFO     | ***************************************
[2025-11-27 06:57:54] 2025-11-27 09:39:01,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 06:57:54] 2025-11-27 09:39:01,732 | INFO     | sufficient remaining disk space (86997204992 B)
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | INFO     | update_server=False
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:57:54] 2025-11-27 09:39:01,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:57:54] 2025-11-27 09:39:01,740 | INFO     | all job control threads have been joined
[2025-11-27 06:57:54] 2025-11-27 09:39:01,840 | INFO     | all payload control threads have been joined
[2025-11-27 06:57:54] 2025-11-27 09:39:02,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:57:54] 2025-11-27 09:39:02,234 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 06:57:54] 2025-11-27 09:39:02,234 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 06:57:54] 2025-11-27 09:39:02,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:57:54] 2025-11-27 09:39:02,235 | INFO     | will abort loop
[2025-11-27 06:57:54] 2025-11-27 09:39:02,559 | INFO     | all data control threads have been joined
[2025-11-27 06:57:54] 2025-11-27 09:39:02,739 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:02,740 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:02,746 | INFO     | [job] control thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:02,793 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:02,845 | INFO     | [payload] control thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,242 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,327 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,328 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,328 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,394 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,395 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,567 | INFO     | [data] control thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:03,743 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:04,068 | INFO     | [job] validate thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:04,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:06,234 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:57:54] 2025-11-27 09:39:30,642 | INFO     | PID=3314603 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:57:54] 2025-11-27 09:39:30,650 | INFO     | .. there are 89 such processes running
[2025-11-27 06:57:54] 2025-11-27 09:39:30,651 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:57:54] 2025-11-27 09:39:30,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:57:54] 2025-11-27 09:39:30,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:57:54] 2025-11-27 09:39:31,587 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:57:54] 2025-11-27 09:39:32,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050242758464)>', '<ExcThread(monitor, started 140049018517248)>']
[2025-11-27 06:57:54] 2025-11-27 09:39:32,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:57:54] 2025-11-27 09:39:32,663 | INFO     | [monitor] control thread has ended
[2025-11-27 06:57:54] 2025-11-27 09:39:37,709 | INFO     | all workflow threads have been joined
[2025-11-27 06:57:54] 2025-11-27 09:39:37,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:57:54] 2025-11-27 09:39:37,710 | INFO     | traces error code: 0
[2025-11-27 06:57:54] 2025-11-27 09:39:37,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:57:54] 2025-11-27 09:39:38,466 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:57:54] 2025-11-27 09:39:38,489 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:57:54] 2025-11-27 09:39:38,509 [wrapper] pilotpid: 3314603
[2025-11-27 06:57:54] 2025-11-27 09:39:38,533 [wrapper] Pilot exit status: 0
[2025-11-27 06:57:54] 2025-11-27 09:39:38,669 [wrapper] pandaids: 6896990099
[2025-11-27 06:57:54] 2025-11-27 09:39:38,888 [wrapper] cleanup supervisor_pilot   74922 3314604
[2025-11-27 06:57:54] 2025-11-27 09:39:38,891 [wrapper] Test setup, not cleaning
[2025-11-27 06:57:54] 2025-11-27 09:39:38,893 [wrapper] apfmon messages muted
[2025-11-27 06:57:54] 2025-11-27 09:39:38,896 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:57:54] 2025-11-27 09:39:38,898 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:57:54]  *** Error codes and diagnostics ***
[2025-11-27 06:57:54]     "exeErrorCode": 0,
[2025-11-27 06:57:54]     "exeErrorDiag": "",
[2025-11-27 06:57:54]     "pilotErrorCode": 0,
[2025-11-27 06:57:54]     "pilotErrorDiag": "",
[2025-11-27 06:57:54]  *** Listing of results directory ***
[2025-11-27 06:57:54] total 1326132
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 07:49 pilot3.tar.gz
[2025-11-27 06:57:54] -rwx------. 1 boincer umatlas     36292 Nov 25 08:15 runpilot2-wrapper.sh
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 08:15 queuedata.json
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:57:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:47 run_atlas
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:47 job.xml
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas 409821350 Nov 26 16:47 EVNT.47483658._002170.pool.root.1
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:47 start_atlas.sh
[2025-11-27 06:57:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:47 shared
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 16:47 input.tar.gz
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:47 boinc_lockfile
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 16:47 pandaJob.out
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas        57 Nov 26 16:47 setup.sh.local
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas    991538 Nov 26 16:48 agis_schedconf.cvmfs.json
[2025-11-27 06:57:54] drwx------. 5 boincer umatlas      4096 Nov 26 16:48 pilot3
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:20 boinc_task_state.xml
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas 930042459 Nov 27 04:36 HITS.47556161._001539.pool.root.1
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas      1059 Nov 27 04:38 memory_monitor_summary.json
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:38 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas   2203688 Nov 27 04:38 log.47556161._001539.job.log.tgz.1
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas      7962 Nov 27 04:38 heartbeat.json
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas        95 Nov 27 04:39 pilot_heartbeat.json
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas      5010 Nov 27 04:39 pilotlog.txt
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas   4878948 Nov 27 04:39 log.47556161._001539.job.log.1
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas       353 Nov 27 04:39 output.list
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:39 runtime_log
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas   7106560 Nov 27 04:39 result.tar.gz
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas      9340 Nov 27 04:39 runtime_log.err
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas       659 Nov 27 04:39 7BSMDmx37h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeOMKDmkBYLJo.diag
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:57 wrapper_checkpoint.txt
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas      6887 Nov 27 06:57 init_data.xml
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:57 boinc_mmap_file
[2025-11-27 06:57:54] -rw-r--r--. 1 boincer umatlas     21172 Nov 27 06:57 stderr.txt
[2025-11-27 06:57:54] HITS file was successfully produced:
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas 930042459 Nov 27 04:36 shared/HITS.pool.root.1
[2025-11-27 06:57:54]  *** Contents of shared directory: ***
[2025-11-27 06:57:54] total 1316012
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas 409821350 Nov 26 16:47 ATLAS.root_0
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:47 start_atlas.sh
[2025-11-27 06:57:54] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 16:47 input.tar.gz
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas 930042459 Nov 27 04:36 HITS.pool.root.1
[2025-11-27 06:57:54] -rw-------. 1 boincer umatlas   7106560 Nov 27 04:39 result.tar.gz
06:57:55 (3298464): run_atlas exited; CPU time 265748.315379
06:57:55 (3298464): called boinc_finish(0)

</stderr_txt>
]]>

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