Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:42 (2777330): wrapper (7.7.26015): starting
16:35:42 (2777330): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:35:42] Arguments: --nthreads 8
[2025-11-26 16:35:42] Threads: 8
[2025-11-26 16:35:42] Checking for CVMFS
[2025-11-26 16:35:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:35:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:35:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:35:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:35:43] 2.13.3.0 12531 30595 437048 153335 2 483 27010184 40960001 27295 16776704 0 157818277 99.690 141165380 39411 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:35:43] CVMFS is ok
[2025-11-26 16:35:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:35:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:35:43] Further information can be found at the LHC@home message board.
[2025-11-26 16:35:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:35:43] Checking for apptainer binary...
[2025-11-26 16:35:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:35:43] Running /usr/bin/apptainer --version
[2025-11-26 16:35:43] apptainer version 1.4.4-1.el9
[2025-11-26 16:35:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:35:43] c7-13-33.aglt2.org
[2025-11-26 16:35:43] apptainer works
[2025-11-26 16:35:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:35:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:35:43] Starting ATLAS job with PandaID=6896450416
[2025-11-26 16:35:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:02:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:02:23] 2025-11-27 10:01:32,383 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:02:23] 2025-11-27 10:01:32,384 | INFO     | sum of square deviations: 122124540093.62888
[2025-11-27 05:02:23] 2025-11-27 10:01:32,429 | INFO     | sum of deviations: 887803474855.9818
[2025-11-27 05:02:23] 2025-11-27 10:01:32,446 | INFO     | mean x: 1764215323.1350615
[2025-11-27 05:02:23] 2025-11-27 10:01:32,446 | INFO     | mean y: 2955024.6971350615
[2025-11-27 05:02:23] 2025-11-27 10:01:32,446 | INFO     | intersect: -12822284628.79645
[2025-11-27 05:02:23] 2025-11-27 10:01:32,447 | INFO     | chi2: 6.615486291708451
[2025-11-27 05:02:23] 2025-11-27 10:01:32,447 | INFO     | sum of square deviations: 119642738007.14267
[2025-11-27 05:02:23] 2025-11-27 10:01:32,510 | INFO     | sum of deviations: 1165086749348.6423
[2025-11-27 05:02:23] 2025-11-27 10:01:32,510 | INFO     | mean x: 1764215170.642857
[2025-11-27 05:02:23] 2025-11-27 10:01:32,510 | INFO     | mean y: 2972065.0178571427
[2025-11-27 05:02:23] 2025-11-27 10:01:32,510 | INFO     | intersect: -17177040299.73708
[2025-11-27 05:02:23] 2025-11-27 10:01:32,515 | INFO     | chi2: 2.8638045929564635
[2025-11-27 05:02:23] 2025-11-27 10:01:32,515 | INFO     | current chi2=2.8638045929564635 (change=56.71059591574053 %)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,516 | INFO     | sum of square deviations: 117194752857.86743
[2025-11-27 05:02:23] 2025-11-27 10:01:32,551 | INFO     | sum of deviations: 1272744703445.029
[2025-11-27 05:02:23] 2025-11-27 10:01:32,551 | INFO     | mean x: 1764215018.1493776
[2025-11-27 05:02:23] 2025-11-27 10:01:32,551 | INFO     | mean y: 2978765.508990318
[2025-11-27 05:02:23] 2025-11-27 10:01:32,551 | INFO     | intersect: -19156542162.966263
[2025-11-27 05:02:23] 2025-11-27 10:01:32,552 | INFO     | chi2: 2.1416992044424106
[2025-11-27 05:02:23] 2025-11-27 10:01:32,552 | INFO     | current chi2=2.1416992044424106 (change=25.21489735333456 %)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,554 | INFO     | sum of square deviations: 114780263452.9526
[2025-11-27 05:02:23] 2025-11-27 10:01:32,619 | INFO     | sum of deviations: 1263146218319.8157
[2025-11-27 05:02:23] 2025-11-27 10:01:32,619 | INFO     | mean x: 1764214865.6518106
[2025-11-27 05:02:23] 2025-11-27 10:01:32,619 | INFO     | mean y: 2978156.295264624
[2025-11-27 05:02:23] 2025-11-27 10:01:32,619 | INFO     | intersect: -19412043806.64972
[2025-11-27 05:02:23] 2025-11-27 10:01:32,624 | INFO     | chi2: 2.1206615362423866
[2025-11-27 05:02:23] 2025-11-27 10:01:32,624 | INFO     | current chi2=2.1206615362423866 (change=0.9822886498900806 %)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,624 | INFO     | right removable region: 717
[2025-11-27 05:02:23] 2025-11-27 10:01:32,625 | INFO     | sum of square deviations: 119642274957.42725
[2025-11-27 05:02:23] 2025-11-27 10:01:32,647 | INFO     | sum of deviations: 702582065905.6372
[2025-11-27 05:02:23] 2025-11-27 10:01:32,647 | INFO     | mean x: 1764215475.6414835
[2025-11-27 05:02:23] 2025-11-27 10:01:32,647 | INFO     | mean y: 2966379.7802197803
[2025-11-27 05:02:23] 2025-11-27 10:01:32,647 | INFO     | intersect: -10357135465.658176
[2025-11-27 05:02:23] 2025-11-27 10:01:32,648 | INFO     | chi2: 4.633873228541867
[2025-11-27 05:02:23] 2025-11-27 10:01:32,648 | INFO     | current chi2=4.633873228541867 (change=29.954155685429317 %)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,653 | INFO     | sum of square deviations: 117194004271.04012
[2025-11-27 05:02:23] 2025-11-27 10:01:32,675 | INFO     | sum of deviations: 656055678752.8799
[2025-11-27 05:02:23] 2025-11-27 10:01:32,682 | INFO     | mean x: 1764215628.143845
[2025-11-27 05:02:23] 2025-11-27 10:01:32,682 | INFO     | mean y: 2969276.366528354
[2025-11-27 05:02:23] 2025-11-27 10:01:32,682 | INFO     | intersect: -9873164648.638033
[2025-11-27 05:02:23] 2025-11-27 10:01:32,687 | INFO     | chi2: 4.590987139374549
[2025-11-27 05:02:23] 2025-11-27 10:01:32,687 | INFO     | current chi2=4.590987139374549 (change=0.9254912047046263 %)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,687 | INFO     | left removable region: 20
[2025-11-27 05:02:23] 2025-11-27 10:01:32,687 | INFO     | sum of square deviations: 105000668506.02563
[2025-11-27 05:02:23] 2025-11-27 10:01:32,709 | INFO     | sum of deviations: 965185095951.5137
[2025-11-27 05:02:23] 2025-11-27 10:01:32,709 | INFO     | mean x: 1764215445.1649928
[2025-11-27 05:02:23] 2025-11-27 10:01:32,709 | INFO     | mean y: 2996995.012912482
[2025-11-27 05:02:23] 2025-11-27 10:01:32,709 | INFO     | intersect: -16213989791.342627
[2025-11-27 05:02:23] 2025-11-27 10:01:32,710 | INFO     | chi2: 0.053587157546083536
[2025-11-27 05:02:23] 2025-11-27 10:01:32,710 | INFO     | current memory leak: 9.19 B/s (using 697 data points, chi2=0.05)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | could have reported an average CPU frequency of 3282 MHz (28 samples)
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | ..............................
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . Timing measurements:
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . get job = 0 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . initial setup = 2 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . payload setup = 10 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . stage-in = 0 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . payload execution = 44680 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . stage-out = 5 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | . log creation = 0 s
[2025-11-27 05:02:23] 2025-11-27 10:01:32,715 | INFO     | ..............................
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | job summary report
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | --------------------------------------------------
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | PanDA job id: 6896450416
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | task id: 47556149
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | errors: (none)
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | pilot state: finished 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | transexitcode: 0
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | exeerrorcode: 0
[2025-11-27 05:02:23] 2025-11-27 10:01:33,072 | INFO     | exeerrordiag: 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | exitcode: 0
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | exitmsg: OK
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | cpuconsumptiontime: 194672 s
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | nevents: 1000
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | neventsw: 0
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | pid: 2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | pgrp: 2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | corecount: 8
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | event service: False
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | sizes: {0: 2283487, 1: 2284343, 9: 2284605, 12: 2284633, 44695: 2330676, 44701: 2339670, 44703: 2339854, 44716: 2340100}
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | --------------------------------------------------
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,073 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:02:23] 2025-11-27 10:01:33,118 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,118 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,119 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | job 6896450416 has completed (purged errors)
[2025-11-27 05:02:23] 2025-11-27 10:01:33,120 | INFO     | overall cleanup function is called
[2025-11-27 05:02:23] 2025-11-27 10:01:33,320 | INFO     | PID=2781205 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 05:02:23] 2025-11-27 10:01:33,324 | INFO     | .. there are 48 such processes running
[2025-11-27 05:02:23] 2025-11-27 10:01:34,164 | INFO     | --- collectZombieJob: --- 10, [2790710]
[2025-11-27 05:02:23] 2025-11-27 10:01:34,165 | INFO     | zombie collector waiting for pid 2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:34,165 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:02:23] 2025-11-27 10:01:34,165 | INFO     | collected zombie processes
[2025-11-27 05:02:23] 2025-11-27 10:01:34,165 | INFO     | will attempt to kill all subprocesses of pid=2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:35,221 | INFO     | process IDs to be killed: [2790710] (in reverse order)
[2025-11-27 05:02:23] 2025-11-27 10:01:35,460 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:02:23] 2025-11-27 10:01:35,460 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:02:23] 2025-11-27 10:01:35,510 | INFO     | did not find any defunct processes belonging to 2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:35,549 | INFO     | did not find any defunct processes belonging to 2790710
[2025-11-27 05:02:23] 2025-11-27 10:01:35,551 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:02:23] 2025-11-27 10:01:35,551 | INFO     | ready for new job
[2025-11-27 05:02:23] 2025-11-27 10:01:35,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:02:23] 2025-11-27 10:01:35,576 | INFO     | ***************************************
[2025-11-27 05:02:23] 2025-11-27 10:01:35,576 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:02:23] 2025-11-27 10:01:35,576 | INFO     | ***************************************
[2025-11-27 05:02:23] 2025-11-27 10:01:35,576 | INFO     | 
[2025-11-27 05:02:23] 2025-11-27 10:01:35,581 | INFO     | architecture information:
[2025-11-27 05:02:23] 2025-11-27 10:01:35,592 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:02:23] 2025-11-27 10:01:35,625 | INFO     | cat /etc/os-release:
[2025-11-27 05:02:23] NAME="CentOS Linux"
[2025-11-27 05:02:23] VERSION="7 (Core)"
[2025-11-27 05:02:23] ID="centos"
[2025-11-27 05:02:23] ID_LIKE="rhel fedora"
[2025-11-27 05:02:23] VERSION_ID="7"
[2025-11-27 05:02:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:02:23] ANSI_COLOR="0;31"
[2025-11-27 05:02:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:02:23] HOME_URL="https://www.centos.org/"
[2025-11-27 05:02:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:02:23] 
[2025-11-27 05:02:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:02:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:02:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:02:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:02:23] 
[2025-11-27 05:02:23] 2025-11-27 10:01:35,625 | INFO     | ***************************************
[2025-11-27 05:02:23] 2025-11-27 10:01:36,158 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:02:23] 2025-11-27 10:01:36,204 | INFO     | sufficient remaining disk space (80467722240 B)
[2025-11-27 05:02:23] 2025-11-27 10:01:36,204 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:02:23] 2025-11-27 10:01:36,204 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:02:23] 2025-11-27 10:01:36,204 | INFO     | update_server=False
[2025-11-27 05:02:23] 2025-11-27 10:01:36,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:02:23] 2025-11-27 10:01:36,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:02:23] 2025-11-27 10:01:36,205 | INFO     | aborting loop
[2025-11-27 05:02:23] 2025-11-27 10:01:36,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:02:23] 2025-11-27 10:01:37,211 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,211 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,213 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,215 | INFO     | all data control threads have been joined
[2025-11-27 05:02:23] 2025-11-27 10:01:37,225 | INFO     | all job control threads have been joined
[2025-11-27 05:02:23] 2025-11-27 10:01:37,281 | INFO     | all payload control threads have been joined
[2025-11-27 05:02:23] 2025-11-27 10:01:37,384 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,557 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,619 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:37,978 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:02:23] 2025-11-27 10:01:38,112 | INFO     | [job] validate thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,232 | INFO     | [job] control thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,244 | INFO     | [data] control thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,287 | INFO     | [payload] control thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,314 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,357 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,615 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:38,984 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:01:39,706 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:02:23] 2025-11-27 10:01:43,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:02:23] 2025-11-27 10:02:06,923 | INFO     | PID=2781205 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:02:23] 2025-11-27 10:02:06,923 | INFO     | .. there are 48 such processes running
[2025-11-27 05:02:23] 2025-11-27 10:02:06,932 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:02:23] 2025-11-27 10:02:06,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:02:23] 2025-11-27 10:02:06,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:02:23] 2025-11-27 10:02:16,559 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:02:23] 2025-11-27 10:02:17,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139677437138752)>', '<ExcThread(monitor, started 139676950189824)>']
[2025-11-27 05:02:23] 2025-11-27 10:02:18,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:02:23] 2025-11-27 10:02:18,032 | INFO     | [monitor] control thread has ended
[2025-11-27 05:02:23] 2025-11-27 10:02:22,264 | INFO     | all workflow threads have been joined
[2025-11-27 05:02:23] 2025-11-27 10:02:22,264 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:02:23] 2025-11-27 10:02:22,264 | INFO     | traces error code: 0
[2025-11-27 05:02:23] 2025-11-27 10:02:22,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:02:23] 2025-11-27 10:02:23,096 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:02:23] 2025-11-27 10:02:23,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:02:23] 2025-11-27 10:02:23,102 [wrapper] pilotpid: 2781205
[2025-11-27 05:02:23] 2025-11-27 10:02:23,104 [wrapper] Pilot exit status: 0
[2025-11-27 05:02:23] 2025-11-27 10:02:23,115 [wrapper] pandaids: 6896450416
[2025-11-27 05:02:23] 2025-11-27 10:02:23,235 [wrapper] cleanup supervisor_pilot 2348604 2781206
[2025-11-27 05:02:23] 2025-11-27 10:02:23,237 [wrapper] Test setup, not cleaning
[2025-11-27 05:02:23] 2025-11-27 10:02:23,239 [wrapper] apfmon messages muted
[2025-11-27 05:02:23] 2025-11-27 10:02:23,242 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:02:23] 2025-11-27 10:02:23,245 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:02:23]  *** Error codes and diagnostics ***
[2025-11-27 05:02:23]     "exeErrorCode": 0,
[2025-11-27 05:02:23]     "exeErrorDiag": "",
[2025-11-27 05:02:23]     "pilotErrorCode": 0,
[2025-11-27 05:02:23]     "pilotErrorDiag": "",
[2025-11-27 05:02:23]  *** Listing of results directory ***
[2025-11-27 05:02:23] total 1305612
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 22:04 pilot3.tar.gz
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 22:36 queuedata.json
[2025-11-27 05:02:23] -rwx------. 1 boincer umatlas     36292 Nov 24 22:41 runpilot2-wrapper.sh
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:02:23] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:35 run_atlas
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:35 job.xml
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas 409405028 Nov 26 16:35 EVNT.47483658._001496.pool.root.1
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:35 start_atlas.sh
[2025-11-27 05:02:23] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:35 shared
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 16:35 input.tar.gz
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:35 boinc_lockfile
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 16:35 pandaJob.out
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas        57 Nov 26 16:35 setup.sh.local
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas    991538 Nov 26 16:35 agis_schedconf.cvmfs.json
[2025-11-27 05:02:23] drwx------. 5 boincer umatlas      4096 Nov 26 16:35 pilot3
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:50 boinc_task_state.xml
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas      6902 Nov 27 05:00 init_data.xml
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas 907930427 Nov 27 05:00 HITS.47556149._004824.pool.root.1
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas      1049 Nov 27 05:01 memory_monitor_summary.json
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas   1955851 Nov 27 05:01 log.47556149._004824.job.log.tgz.1
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas      8580 Nov 27 05:01 heartbeat.json
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas        95 Nov 27 05:02 pilot_heartbeat.json
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:02 wrapper_checkpoint.txt
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas      4824 Nov 27 05:02 pilotlog.txt
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas   5887594 Nov 27 05:02 log.47556149._004824.job.log.1
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas       353 Nov 27 05:02 output.list
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:02 runtime_log
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas   7864320 Nov 27 05:02 result.tar.gz
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas       660 Nov 27 05:02 U5mMDm66yh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb5LKDmOZsDin.diag
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 05:02 runtime_log.err
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:02 boinc_mmap_file
[2025-11-27 05:02:23] -rw-r--r--. 1 boincer umatlas     21007 Nov 27 05:02 stderr.txt
[2025-11-27 05:02:23] HITS file was successfully produced:
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas 907930427 Nov 27 05:00 shared/HITS.pool.root.1
[2025-11-27 05:02:23]  *** Contents of shared directory: ***
[2025-11-27 05:02:23] total 1294748
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas 409405028 Nov 26 16:35 ATLAS.root_0
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:35 start_atlas.sh
[2025-11-27 05:02:23] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 16:35 input.tar.gz
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas 907930427 Nov 27 05:00 HITS.pool.root.1
[2025-11-27 05:02:23] -rw-------. 1 boincer umatlas   7864320 Nov 27 05:02 result.tar.gz
05:02:44 (2777330): run_atlas exited; CPU time 194944.117446
05:02:44 (2777330): called boinc_finish(0)

</stderr_txt>
]]>

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