Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:40:18 (25761): wrapper (7.7.26015): starting
16:40:18 (25761): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:40:18] Arguments: --nthreads 8
[2025-11-26 16:40:18] Threads: 8
[2025-11-26 16:40:18] Checking for CVMFS
[2025-11-26 16:40:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:40:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:40:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:40:19] 2.11.2.0 2830 57708 82660 153335 1 82 10893762 20275201 1 130560 0 12079690 99.753 3864922 27936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 16:40:19] CVMFS is ok
[2025-11-26 16:40:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:40:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:40:19] Further information can be found at the LHC@home message board.
[2025-11-26 16:40:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:40:19] Checking for apptainer binary...
[2025-11-26 16:40:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:40:19] Running /usr/bin/apptainer --version
[2025-11-26 16:40:19] apptainer version 1.3.2-1.el7
[2025-11-26 16:40:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:40:20] c-204-15.aglt2.org
[2025-11-26 16:40:20] apptainer works
[2025-11-26 16:40:20] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:40:20] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:40:20] Starting ATLAS job with PandaID=6891594818
[2025-11-26 16:40:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:18:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:18:01] 2025-11-27 10:17:28,489 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:18:01] 2025-11-27 10:17:28,502 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:18:01] 2025-11-27 10:17:28,503 | INFO     | sum of square deviations: 127701052058.18114
[2025-11-27 05:18:01] 2025-11-27 10:17:28,514 | INFO     | sum of deviations: 759577398179.2642
[2025-11-27 05:18:01] 2025-11-27 10:17:28,514 | INFO     | mean x: 1764215933.141129
[2025-11-27 05:18:01] 2025-11-27 10:17:28,514 | INFO     | mean y: 3242276.759408602
[2025-11-27 05:18:01] 2025-11-27 10:17:28,514 | INFO     | intersect: -10490473528.42601
[2025-11-27 05:18:01] 2025-11-27 10:17:28,515 | INFO     | chi2: 6.229932918992038
[2025-11-27 05:18:01] 2025-11-27 10:17:28,516 | INFO     | sum of square deviations: 125143828661.11191
[2025-11-27 05:18:01] 2025-11-27 10:17:28,527 | INFO     | sum of deviations: 1021474497931.9103
[2025-11-27 05:18:01] 2025-11-27 10:17:28,527 | INFO     | mean x: 1764215780.6454668
[2025-11-27 05:18:01] 2025-11-27 10:17:28,527 | INFO     | mean y: 3257886.8240866037
[2025-11-27 05:18:01] 2025-11-27 10:17:28,528 | INFO     | intersect: -14396984203.08713
[2025-11-27 05:18:01] 2025-11-27 10:17:28,528 | INFO     | chi2: 3.44523721873066
[2025-11-27 05:18:01] 2025-11-27 10:17:28,528 | INFO     | current chi2=3.44523721873066 (change=44.69864662221633 %)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,529 | INFO     | sum of square deviations: 122620978001.51527
[2025-11-27 05:18:01] 2025-11-27 10:17:28,541 | INFO     | sum of deviations: 1180015732446.295
[2025-11-27 05:18:01] 2025-11-27 10:17:28,541 | INFO     | mean x: 1764215628.1498637
[2025-11-27 05:18:01] 2025-11-27 10:17:28,541 | INFO     | mean y: 3267468.4427792914
[2025-11-27 05:18:01] 2025-11-27 10:17:28,541 | INFO     | intersect: -16974269577.614183
[2025-11-27 05:18:01] 2025-11-27 10:17:28,542 | INFO     | chi2: 2.363453885426242
[2025-11-27 05:18:01] 2025-11-27 10:17:28,542 | INFO     | current chi2=2.363453885426242 (change=31.399386011015608 %)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,543 | INFO     | sum of square deviations: 120132178335.50087
[2025-11-27 05:18:01] 2025-11-27 10:17:28,554 | INFO     | sum of deviations: 1179719955447.9875
[2025-11-27 05:18:01] 2025-11-27 10:17:28,554 | INFO     | mean x: 1764215475.6515775
[2025-11-27 05:18:01] 2025-11-27 10:17:28,554 | INFO     | mean y: 3267445.2716049384
[2025-11-27 05:18:01] 2025-11-27 10:17:28,554 | INFO     | intersect: -17321651083.416054
[2025-11-27 05:18:01] 2025-11-27 10:17:28,555 | INFO     | chi2: 2.3164310282553426
[2025-11-27 05:18:01] 2025-11-27 10:17:28,555 | INFO     | current chi2=2.3164310282553426 (change=1.9895821729738905 %)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,555 | INFO     | right removable region: 728
[2025-11-27 05:18:01] 2025-11-27 10:17:28,556 | INFO     | sum of square deviations: 125143537691.112
[2025-11-27 05:18:01] 2025-11-27 10:17:28,568 | INFO     | sum of deviations: 533088340372.4106
[2025-11-27 05:18:01] 2025-11-27 10:17:28,568 | INFO     | mean x: 1764216085.6454668
[2025-11-27 05:18:01] 2025-11-27 10:17:28,568 | INFO     | mean y: 3255760.749661705
[2025-11-27 05:18:01] 2025-11-27 10:17:28,568 | INFO     | intersect: -7511978685.286364
[2025-11-27 05:18:01] 2025-11-27 10:17:28,569 | INFO     | chi2: 4.061020966565115
[2025-11-27 05:18:01] 2025-11-27 10:17:28,569 | INFO     | current chi2=4.061020966565115 (change=34.81437088696355 %)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,570 | INFO     | sum of square deviations: 122620396061.51534
[2025-11-27 05:18:01] 2025-11-27 10:17:28,581 | INFO     | sum of deviations: 485276585657.8789
[2025-11-27 05:18:01] 2025-11-27 10:17:28,581 | INFO     | mean x: 1764216238.1498637
[2025-11-27 05:18:01] 2025-11-27 10:17:28,582 | INFO     | mean y: 3258648.8010899182
[2025-11-27 05:18:01] 2025-11-27 10:17:28,582 | INFO     | intersect: -6978718737.5878315
[2025-11-27 05:18:01] 2025-11-27 10:17:28,582 | INFO     | chi2: 4.013808023335853
[2025-11-27 05:18:01] 2025-11-27 10:17:28,583 | INFO     | current chi2=4.013808023335853 (change=1.1625880195638438 %)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,583 | INFO     | left removable region: 20
[2025-11-27 05:18:01] 2025-11-27 10:17:28,583 | INFO     | sum of square deviations: 110046345364.96494
[2025-11-27 05:18:01] 2025-11-27 10:17:28,594 | INFO     | sum of deviations: 849247469017.1687
[2025-11-27 05:18:01] 2025-11-27 10:17:28,594 | INFO     | mean x: 1764216055.1596045
[2025-11-27 05:18:01] 2025-11-27 10:17:28,594 | INFO     | mean y: 3287783.033898305
[2025-11-27 05:18:01] 2025-11-27 10:17:28,594 | INFO     | intersect: -13611485289.845833
[2025-11-27 05:18:01] 2025-11-27 10:17:28,595 | INFO     | chi2: 0.07058382021016919
[2025-11-27 05:18:01] 2025-11-27 10:17:28,595 | INFO     | current memory leak: 7.72 B/s (using 708 data points, chi2=0.07)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,595 | INFO     | could have reported an average CPU frequency of 2184 MHz (28 samples)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | ..............................
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . Timing measurements:
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . get job = 0 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . initial setup = 2 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . payload setup = 9 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . stage-in = 0 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,596 | INFO     | . payload execution = 45366 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,597 | INFO     | . stage-out = 3 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,597 | INFO     | . log creation = 0 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,597 | INFO     | ..............................
[2025-11-27 05:18:01] 2025-11-27 10:17:28,955 | INFO     | 
[2025-11-27 05:18:01] 2025-11-27 10:17:28,955 | INFO     | job summary report
[2025-11-27 05:18:01] 2025-11-27 10:17:28,956 | INFO     | --------------------------------------------------
[2025-11-27 05:18:01] 2025-11-27 10:17:28,956 | INFO     | PanDA job id: 6891594818
[2025-11-27 05:18:01] 2025-11-27 10:17:28,956 | INFO     | task id: 47493068
[2025-11-27 05:18:01] 2025-11-27 10:17:28,956 | INFO     | errors: (none)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,956 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | pilot state: finished 
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | transexitcode: 0
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | exeerrorcode: 0
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | exeerrordiag: 
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | exitcode: 0
[2025-11-27 05:18:01] 2025-11-27 10:17:28,957 | INFO     | exitmsg: OK
[2025-11-27 05:18:01] 2025-11-27 10:17:28,958 | INFO     | cpuconsumptiontime: 351466 s
[2025-11-27 05:18:01] 2025-11-27 10:17:28,958 | INFO     | nevents: 1000
[2025-11-27 05:18:01] 2025-11-27 10:17:28,958 | INFO     | neventsw: 0
[2025-11-27 05:18:01] 2025-11-27 10:17:28,958 | INFO     | pid: 3604
[2025-11-27 05:18:01] 2025-11-27 10:17:28,958 | INFO     | pgrp: 3604
[2025-11-27 05:18:01] 2025-11-27 10:17:28,959 | INFO     | corecount: 8
[2025-11-27 05:18:01] 2025-11-27 10:17:28,959 | INFO     | event service: False
[2025-11-27 05:18:01] 2025-11-27 10:17:28,959 | INFO     | sizes: {0: 2284132, 1: 2284331, 7: 2284593, 12: 2284621, 45380: 2330647, 45385: 2339825, 45393: 2340015}
[2025-11-27 05:18:01] 2025-11-27 10:17:28,959 | INFO     | --------------------------------------------------
[2025-11-27 05:18:01] 2025-11-27 10:17:28,959 | INFO     | 
[2025-11-27 05:18:01] 2025-11-27 10:17:28,960 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:18:01] 2025-11-27 10:17:28,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,994 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,994 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,994 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,994 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:18:01] 2025-11-27 10:17:28,994 | INFO     | job 6891594818 has completed (purged errors)
[2025-11-27 05:18:01] 2025-11-27 10:17:28,995 | INFO     | overall cleanup function is called
[2025-11-27 05:18:01] 2025-11-27 10:17:29,144 | INFO     | PID=29441 has CPU usage=13.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 05:18:01] 2025-11-27 10:17:30,009 | INFO     | --- collectZombieJob: --- 10, [3604]
[2025-11-27 05:18:01] 2025-11-27 10:17:30,010 | INFO     | zombie collector waiting for pid 3604
[2025-11-27 05:18:01] 2025-11-27 10:17:30,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:18:01] 2025-11-27 10:17:30,010 | INFO     | collected zombie processes
[2025-11-27 05:18:01] 2025-11-27 10:17:30,010 | INFO     | will attempt to kill all subprocesses of pid=3604
[2025-11-27 05:18:01] 2025-11-27 10:17:30,099 | INFO     | process IDs to be killed: [3604] (in reverse order)
[2025-11-27 05:18:01] 2025-11-27 10:17:30,158 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:18:01] 2025-11-27 10:17:30,159 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:18:01] 2025-11-27 10:17:30,162 | INFO     | did not find any defunct processes belonging to 3604
[2025-11-27 05:18:01] 2025-11-27 10:17:30,165 | INFO     | did not find any defunct processes belonging to 3604
[2025-11-27 05:18:01] 2025-11-27 10:17:30,167 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:18:01] 2025-11-27 10:17:30,167 | INFO     | ready for new job
[2025-11-27 05:18:01] 2025-11-27 10:17:30,168 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:18:01] 2025-11-27 10:17:30,171 | INFO     | ***************************************
[2025-11-27 05:18:01] 2025-11-27 10:17:30,172 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:18:01] 2025-11-27 10:17:30,172 | INFO     | ***************************************
[2025-11-27 05:18:01] 2025-11-27 10:17:30,172 | INFO     | 
[2025-11-27 05:18:01] 2025-11-27 10:17:30,172 | INFO     | architecture information:
[2025-11-27 05:18:01] 2025-11-27 10:17:30,173 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:18:01] 2025-11-27 10:17:30,191 | INFO     | cat /etc/os-release:
[2025-11-27 05:18:01] NAME="CentOS Linux"
[2025-11-27 05:18:01] VERSION="7 (Core)"
[2025-11-27 05:18:01] ID="centos"
[2025-11-27 05:18:01] ID_LIKE="rhel fedora"
[2025-11-27 05:18:01] VERSION_ID="7"
[2025-11-27 05:18:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:18:01] ANSI_COLOR="0;31"
[2025-11-27 05:18:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:18:01] HOME_URL="https://www.centos.org/"
[2025-11-27 05:18:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:18:01] 
[2025-11-27 05:18:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:18:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:18:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:18:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:18:01] 
[2025-11-27 05:18:01] 2025-11-27 10:17:30,191 | INFO     | ***************************************
[2025-11-27 05:18:01] 2025-11-27 10:17:30,695 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:18:01] 2025-11-27 10:17:30,715 | INFO     | sufficient remaining disk space (17468227584 B)
[2025-11-27 05:18:01] 2025-11-27 10:17:30,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:18:01] 2025-11-27 10:17:30,716 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:18:01] 2025-11-27 10:17:30,716 | INFO     | update_server=False
[2025-11-27 05:18:01] 2025-11-27 10:17:30,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:18:01] 2025-11-27 10:17:30,717 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:18:01] 2025-11-27 10:17:30,717 | INFO     | aborting loop
[2025-11-27 05:18:01] 2025-11-27 10:17:30,958 | INFO     | all job control threads have been joined
[2025-11-27 05:18:01] 2025-11-27 10:17:31,026 | INFO     | all payload control threads have been joined
[2025-11-27 05:18:01] 2025-11-27 10:17:31,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:18:01] 2025-11-27 10:17:31,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:18:01] 2025-11-27 10:17:31,722 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:31,722 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:31,748 | INFO     | all data control threads have been joined
[2025-11-27 05:18:01] 2025-11-27 10:17:31,964 | INFO     | [job] control thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,031 | INFO     | [payload] control thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,471 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,482 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,495 | INFO     | [job] validate thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,753 | INFO     | [data] control thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:32,773 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:33,017 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:33,022 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:33,112 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:33,409 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:33,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:18:01] 2025-11-27 10:17:34,704 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:35,492 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:41,764 | INFO     | job.realtimelogging is not enabled
[2025-11-27 05:18:01] 2025-11-27 10:17:42,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:18:01] 2025-11-27 10:17:53,641 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:18:01] 2025-11-27 10:17:55,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013821724480)>', '<ExcThread(monitor, started 140013594736384)>']
[2025-11-27 05:18:01] 2025-11-27 10:18:00,243 | INFO     | all workflow threads have been joined
[2025-11-27 05:18:01] 2025-11-27 10:18:00,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:18:01] 2025-11-27 10:18:00,243 | INFO     | traces error code: 0
[2025-11-27 05:18:01] 2025-11-27 10:18:00,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:18:01] 2025-11-27 10:18:01,361 | INFO     | PID=29441 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 05:18:01] 2025-11-27 10:18:01,362 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:18:01] 2025-11-27 10:18:01,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:18:01] 2025-11-27 10:18:01,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:18:01] 2025-11-27 10:18:01,362 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:18:01] 2025-11-27 10:18:01,362 | INFO     | [monitor] control thread has ended
[2025-11-27 05:18:01] 2025-11-27 10:18:01,476 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:18:01] 2025-11-27 10:18:01,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:18:01] 2025-11-27 10:18:01,485 [wrapper] pilotpid: 29441
[2025-11-27 05:18:01] 2025-11-27 10:18:01,490 [wrapper] Pilot exit status: 0
[2025-11-27 05:18:01] 2025-11-27 10:18:01,507 [wrapper] pandaids: 6891594818
[2025-11-27 05:18:01] 2025-11-27 10:18:01,553 [wrapper] cleanup supervisor_pilot 15468 29442
[2025-11-27 05:18:01] 2025-11-27 10:18:01,559 [wrapper] Test setup, not cleaning
[2025-11-27 05:18:01] 2025-11-27 10:18:01,564 [wrapper] apfmon messages muted
[2025-11-27 05:18:01] 2025-11-27 10:18:01,569 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:18:01] 2025-11-27 10:18:01,574 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:18:01]  *** Error codes and diagnostics ***
[2025-11-27 05:18:01]     "exeErrorCode": 0,
[2025-11-27 05:18:01]     "exeErrorDiag": "",
[2025-11-27 05:18:01]     "pilotErrorCode": 0,
[2025-11-27 05:18:01]     "pilotErrorDiag": "",
[2025-11-27 05:18:01]  *** Listing of results directory ***
[2025-11-27 05:18:01] total 1313976
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 13:40 queuedata.json
[2025-11-27 05:18:01] -rwx------ 1 boincer umatlas     36292 Nov 18 13:41 runpilot2-wrapper.sh
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas       100 Nov 26 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:18:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 16:40 run_atlas
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas       105 Nov 26 16:40 job.xml
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas 408440365 Nov 26 16:40 EVNT.47493065._000764.pool.root.1
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 16:40 start_atlas.sh
[2025-11-27 05:18:01] drwxrwx--x 2 boincer umatlas      4096 Nov 26 16:40 shared
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 16:40 input.tar.gz
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas         0 Nov 26 16:40 boinc_lockfile
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas      2772 Nov 26 16:40 pandaJob.out
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas    991538 Nov 26 16:40 agis_schedconf.cvmfs.json
[2025-11-27 05:18:01] drwx------ 5 boincer umatlas      4096 Nov 26 16:40 pilot3
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas       532 Nov 27 05:06 boinc_task_state.xml
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 05:09 init_data.xml
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas 916708460 Nov 27 05:16 HITS.47493068._006290.pool.root.1
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas      1062 Nov 27 05:17 memory_monitor_summary.json
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas   1516240 Nov 27 05:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas   1991244 Nov 27 05:17 log.47493068._006290.job.log.tgz.1
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas      8659 Nov 27 05:17 heartbeat.json
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 05:17 boinc_mmap_file
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas        29 Nov 27 05:17 wrapper_checkpoint.txt
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas        95 Nov 27 05:18 pilot_heartbeat.json
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas       745 Nov 27 05:18 pilotlog.txt
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas   6233241 Nov 27 05:18 log.47493068._006290.job.log.1
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas       353 Nov 27 05:18 output.list
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas       620 Nov 27 05:18 runtime_log
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas   8243200 Nov 27 05:18 result.tar.gz
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas      8704 Nov 27 05:18 runtime_log.err
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas       668 Nov 27 05:18 mXtLDm9off8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtIGKDmmyWdbm.diag
[2025-11-27 05:18:01] -rw-r--r-- 1 boincer umatlas     21182 Nov 27 05:18 stderr.txt
[2025-11-27 05:18:01] HITS file was successfully produced:
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas 916708460 Nov 27 05:16 shared/HITS.pool.root.1
[2025-11-27 05:18:01]  *** Contents of shared directory: ***
[2025-11-27 05:18:01] total 1302748
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas 408440365 Nov 26 16:40 ATLAS.root_0
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 16:40 start_atlas.sh
[2025-11-27 05:18:01] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 16:40 input.tar.gz
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas 916708460 Nov 27 05:16 HITS.pool.root.1
[2025-11-27 05:18:01] -rw------- 1 boincer umatlas   8243200 Nov 27 05:18 result.tar.gz
05:18:03 (25761): run_atlas exited; CPU time 349166.134016
05:18:03 (25761): called boinc_finish(0)

</stderr_txt>
]]>

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