Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:28:19 (143315): wrapper (7.7.26015): starting
17:28:19 (143315): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:28:19] Arguments: --nthreads 8
[2025-11-26 17:28:19] Threads: 8
[2025-11-26 17:28:19] Checking for CVMFS
[2025-11-26 17:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:28:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:28:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:28:21] 2.13.3.0 7100 30587 189640 153337 1 621 32554747 40960000 49209 16776704 0 413419150 99.720 273315360 48521 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:28:21] CVMFS is ok
[2025-11-26 17:28:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:28:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:28:21] Further information can be found at the LHC@home message board.
[2025-11-26 17:28:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:28:21] Checking for apptainer binary...
[2025-11-26 17:28:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:28:21] Running /usr/bin/apptainer --version
[2025-11-26 17:28:22] apptainer version 1.4.4-1.el9
[2025-11-26 17:28:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:28:24] c8-6-10.aglt2.org
[2025-11-26 17:28:24] apptainer works
[2025-11-26 17:28:24] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:28:24] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:28:24] Starting ATLAS job with PandaID=6896297826
[2025-11-26 17:28:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:25:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:25:54] 2025-11-27 10:24:49,428 | INFO     | job 6896297826 has finished - writing final server update
[2025-11-27 05:25:54] 2025-11-27 10:24:49,428 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 05:25:54] 2025-11-27 10:24:49,435 | INFO     | executing command: lscpu
[2025-11-27 05:25:54] 2025-11-27 10:24:49,505 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 05:25:54] 2025-11-27 10:24:50,352 | INFO     | time since job start (42861s) is within the limit (172800.0s)
[2025-11-27 05:25:54] 2025-11-27 10:24:51,545 | INFO     | monitor loop #2365: job 0:6896297826 is in state 'finished'
[2025-11-27 05:25:54] 2025-11-27 10:24:51,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:25:54] 2025-11-27 10:24:52,695 | INFO     | PID=175153 has CPU usage=17.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:25:54] 2025-11-27 10:24:52,695 | INFO     | .. there are 75 such processes running
[2025-11-27 05:25:54] 2025-11-27 10:24:53,696 | INFO     | time since job start (42864s) is within the limit (172800.0s)
[2025-11-27 05:25:54] 2025-11-27 10:24:54,050 | INFO     | monitor loop #2366: job 0:6896297826 is in state 'finished'
[2025-11-27 05:25:54] 2025-11-27 10:24:54,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:25:54] 2025-11-27 10:24:55,703 | INFO     | time since job start (42866s) is within the limit (172800.0s)
[2025-11-27 05:25:54] 2025-11-27 10:24:56,559 | INFO     | monitor loop #2367: job 0:6896297826 is in state 'finished'
[2025-11-27 05:25:54] 2025-11-27 10:24:56,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:25:54] 2025-11-27 10:24:57,710 | INFO     | time since job start (42868s) is within the limit (172800.0s)
[2025-11-27 05:25:54] 2025-11-27 10:24:58,982 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 05:25:54] 2025-11-27 10:24:58,987 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9893046875004
[2025-11-27 05:25:54] 2025-11-27 10:24:59,000 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896297826/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,001 | INFO     | extracted standard info from prmon json
[2025-11-27 05:25:54] 2025-11-27 10:24:59,001 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:25:54] 2025-11-27 10:24:59,001 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:25:54] 2025-11-27 10:24:59,007 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:25:54] 2025-11-27 10:24:59,008 | INFO     | sum of square deviations: 105905457645.42757
[2025-11-27 05:25:54] 2025-11-27 10:24:59,014 | INFO     | sum of deviations: -290333663908.312
[2025-11-27 05:25:54] 2025-11-27 10:24:59,014 | INFO     | mean x: 1764217779.9713876
[2025-11-27 05:25:54] 2025-11-27 10:24:59,014 | INFO     | mean y: 2807358.084406295
[2025-11-27 05:25:54] 2025-11-27 10:24:59,014 | INFO     | intersect: 4839307982.123735
[2025-11-27 05:25:54] 2025-11-27 10:24:59,014 | INFO     | chi2: 24.73089991839341
[2025-11-27 05:25:54] 2025-11-27 10:24:59,015 | INFO     | sum of square deviations: 103649278243.17593
[2025-11-27 05:25:54] 2025-11-27 10:24:59,020 | INFO     | sum of deviations: -64786692860.41161
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | mean x: 1764217627.4783862
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | mean y: 2822597.7391930837
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | intersect: 1105558936.1650848
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | chi2: 21.292827102928225
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | current chi2=21.292827102928225 (change=13.901931700059746 %)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,021 | INFO     | right removable region: 693
[2025-11-27 05:25:54] 2025-11-27 10:24:59,022 | INFO     | sum of square deviations: 103648864053.17595
[2025-11-27 05:25:54] 2025-11-27 10:24:59,027 | INFO     | sum of deviations: -559266531999.2478
[2025-11-27 05:25:54] 2025-11-27 10:24:59,027 | INFO     | mean x: 1764217932.4783862
[2025-11-27 05:25:54] 2025-11-27 10:24:59,027 | INFO     | mean y: 2825528.850144092
[2025-11-27 05:25:54] 2025-11-27 10:24:59,028 | INFO     | intersect: 9522158459.32848
[2025-11-27 05:25:54] 2025-11-27 10:24:59,028 | INFO     | chi2: 20.865354278710182
[2025-11-27 05:25:54] 2025-11-27 10:24:59,028 | INFO     | current chi2=20.865354278710182 (change=15.630428542587154 %)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,028 | INFO     | left removable region: 10
[2025-11-27 05:25:54] 2025-11-27 10:24:59,028 | INFO     | sum of square deviations: 98798194032.96338
[2025-11-27 05:25:54] 2025-11-27 10:24:59,034 | INFO     | sum of deviations: -405769702797.1653
[2025-11-27 05:25:54] 2025-11-27 10:24:59,034 | INFO     | mean x: 1764217901.9926794
[2025-11-27 05:25:54] 2025-11-27 10:24:59,034 | INFO     | mean y: 2851945.166910688
[2025-11-27 05:25:54] 2025-11-27 10:24:59,034 | INFO     | intersect: 7248593436.374372
[2025-11-27 05:25:54] 2025-11-27 10:24:59,035 | INFO     | chi2: 15.797456182948254
[2025-11-27 05:25:54] 2025-11-27 10:24:59,035 | INFO     | current memory leak: -4.11 B/s (using 683 data points, chi2=15.80)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | could have reported an average CPU frequency of 3797 MHz (27 samples)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | ..............................
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . Timing measurements:
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . get job = 0 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . initial setup = 9 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . payload setup = 91 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . stage-in = 0 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . payload execution = 42623 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . stage-out = 6 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | . log creation = 0 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,036 | INFO     | ..............................
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | 
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | job summary report
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | --------------------------------------------------
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | PanDA job id: 6896297826
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | task id: 47556149
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | errors: (none)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | pilot state: finished 
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | transexitcode: 0
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | exeerrorcode: 0
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | exeerrordiag: 
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | exitcode: 0
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | exitmsg: OK
[2025-11-27 05:25:54] 2025-11-27 10:24:59,362 | INFO     | cpuconsumptiontime: 135794 s
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | nevents: 1000
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | neventsw: 0
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | pid: 235080
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | pgrp: 235080
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | corecount: 8
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | event service: False
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | sizes: {0: 2284144, 1: 2284343, 12: 2284343, 23: 2284371, 34: 2284399, 44: 2284427, 55: 2284583, 62: 2284873, 66: 2284901, 42720: 2327739, 42721: 2327738, 42729: 2
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | --------------------------------------------------
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | 
[2025-11-27 05:25:54] 2025-11-27 10:24:59,363 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | job 6896297826 has completed (purged errors)
[2025-11-27 05:25:54] 2025-11-27 10:24:59,396 | INFO     | overall cleanup function is called
[2025-11-27 05:25:54] 2025-11-27 10:25:00,413 | INFO     | --- collectZombieJob: --- 10, [235080]
[2025-11-27 05:25:54] 2025-11-27 10:25:00,413 | INFO     | zombie collector waiting for pid 235080
[2025-11-27 05:25:54] 2025-11-27 10:25:00,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:25:54] 2025-11-27 10:25:00,413 | INFO     | collected zombie processes
[2025-11-27 05:25:54] 2025-11-27 10:25:00,413 | INFO     | will attempt to kill all subprocesses of pid=235080
[2025-11-27 05:25:54] 2025-11-27 10:25:01,288 | INFO     | process IDs to be killed: [235080] (in reverse order)
[2025-11-27 05:25:54] 2025-11-27 10:25:01,511 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:25:54] 2025-11-27 10:25:01,512 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:25:54] 2025-11-27 10:25:01,545 | INFO     | did not find any defunct processes belonging to 235080
[2025-11-27 05:25:54] 2025-11-27 10:25:01,573 | INFO     | did not find any defunct processes belonging to 235080
[2025-11-27 05:25:54] 2025-11-27 10:25:01,574 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:25:54] 2025-11-27 10:25:01,574 | INFO     | ready for new job
[2025-11-27 05:25:54] 2025-11-27 10:25:01,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:25:54] 2025-11-27 10:25:01,582 | INFO     | ***************************************
[2025-11-27 05:25:54] 2025-11-27 10:25:01,582 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:25:54] 2025-11-27 10:25:01,582 | INFO     | ***************************************
[2025-11-27 05:25:54] 2025-11-27 10:25:01,582 | INFO     | 
[2025-11-27 05:25:54] 2025-11-27 10:25:01,591 | INFO     | architecture information:
[2025-11-27 05:25:54] 2025-11-27 10:25:01,608 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:25:54] 2025-11-27 10:25:01,648 | INFO     | cat /etc/os-release:
[2025-11-27 05:25:54] NAME="CentOS Linux"
[2025-11-27 05:25:54] VERSION="7 (Core)"
[2025-11-27 05:25:54] ID="centos"
[2025-11-27 05:25:54] ID_LIKE="rhel fedora"
[2025-11-27 05:25:54] VERSION_ID="7"
[2025-11-27 05:25:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:25:54] ANSI_COLOR="0;31"
[2025-11-27 05:25:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:25:54] HOME_URL="https://www.centos.org/"
[2025-11-27 05:25:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:25:54] 
[2025-11-27 05:25:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:25:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:25:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:25:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:25:54] 
[2025-11-27 05:25:54] 2025-11-27 10:25:01,648 | INFO     | ***************************************
[2025-11-27 05:25:54] 2025-11-27 10:25:02,150 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:25:54] 2025-11-27 10:25:02,173 | INFO     | sufficient remaining disk space (155000504320 B)
[2025-11-27 05:25:54] 2025-11-27 10:25:02,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:25:54] 2025-11-27 10:25:02,173 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:25:54] 2025-11-27 10:25:02,173 | INFO     | update_server=False
[2025-11-27 05:25:54] 2025-11-27 10:25:02,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:25:54] 2025-11-27 10:25:02,230 | INFO     | all job control threads have been joined
[2025-11-27 05:25:54] 2025-11-27 10:25:02,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:25:54] 2025-11-27 10:25:02,600 | INFO     | aborting loop
[2025-11-27 05:25:54] 2025-11-27 10:25:02,857 | INFO     | all payload control threads have been joined
[2025-11-27 05:25:54] 2025-11-27 10:25:02,927 | INFO     | all data control threads have been joined
[2025-11-27 05:25:54] 2025-11-27 10:25:03,180 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:03,236 | INFO     | [job] control thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:03,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:25:54] 2025-11-27 10:25:03,607 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:03,863 | INFO     | [payload] control thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:03,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:25:54] 2025-11-27 10:25:03,933 | INFO     | [data] control thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,013 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,060 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,181 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:25:54] 2025-11-27 10:25:04,363 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,375 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,408 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,409 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:04,411 | INFO     | [job] validate thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:05,193 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:05,598 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:07,889 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:25:54] 2025-11-27 10:25:29,752 | INFO     | 42879s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 05:25:54] 2025-11-27 10:25:32,948 | INFO     | PID=175153 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 05:25:54] 2025-11-27 10:25:32,948 | INFO     | .. there are 74 such processes running
[2025-11-27 05:25:54] 2025-11-27 10:25:32,952 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:25:54] 2025-11-27 10:25:32,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:25:54] 2025-11-27 10:25:32,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:25:54] 2025-11-27 10:25:46,170 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:25:54] 2025-11-27 10:25:47,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140009644963648)>', '<ExcThread(monitor, started 140009013241600)>']
[2025-11-27 05:25:54] 2025-11-27 10:25:48,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:25:54] 2025-11-27 10:25:48,081 | INFO     | [monitor] control thread has ended
[2025-11-27 05:25:54] 2025-11-27 10:25:52,226 | INFO     | all workflow threads have been joined
[2025-11-27 05:25:54] 2025-11-27 10:25:52,226 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:25:54] 2025-11-27 10:25:52,231 | INFO     | traces error code: 0
[2025-11-27 05:25:54] 2025-11-27 10:25:52,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:25:54] 2025-11-27 10:25:53,794 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:25:54] 2025-11-27 10:25:53,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:25:54] 2025-11-27 10:25:53,804 [wrapper] pilotpid: 175153
[2025-11-27 05:25:54] 2025-11-27 10:25:53,809 [wrapper] Pilot exit status: 0
[2025-11-27 05:25:54] 2025-11-27 10:25:53,828 [wrapper] pandaids: 6896297826
[2025-11-27 05:25:54] 2025-11-27 10:25:53,979 [wrapper] cleanup supervisor_pilot 2293407 175154
[2025-11-27 05:25:54] 2025-11-27 10:25:54,014 [wrapper] Test setup, not cleaning
[2025-11-27 05:25:54] 2025-11-27 10:25:54,017 [wrapper] apfmon messages muted
[2025-11-27 05:25:54] 2025-11-27 10:25:54,022 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:25:54] 2025-11-27 10:25:54,024 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:25:54]  *** Error codes and diagnostics ***
[2025-11-27 05:25:54]     "exeErrorCode": 0,
[2025-11-27 05:25:54]     "exeErrorDiag": "",
[2025-11-27 05:25:54]     "pilotErrorCode": 0,
[2025-11-27 05:25:54]     "pilotErrorDiag": "",
[2025-11-27 05:25:54]  *** Listing of results directory ***
[2025-11-27 05:25:54] total 1299684
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 20:11 queuedata.json
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 20:13 pilot3.tar.gz
[2025-11-27 05:25:54] -rwx------. 1 boincer umatlas     36292 Nov 24 20:14 runpilot2-wrapper.sh
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:25:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:28 run_atlas
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:28 job.xml
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas 410469631 Nov 26 17:28 EVNT.47483658._001469.pool.root.1
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:28 start_atlas.sh
[2025-11-27 05:25:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:28 shared
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 17:28 input.tar.gz
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:28 boinc_lockfile
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 17:28 pandaJob.out
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas        57 Nov 26 17:28 setup.sh.local
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas    991546 Nov 26 17:30 agis_schedconf.cvmfs.json
[2025-11-27 05:25:54] drwx------. 5 boincer umatlas      4096 Nov 26 17:30 pilot3
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:55 boinc_task_state.xml
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 05:19 init_data.xml
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas 902491227 Nov 27 05:23 HITS.47556149._004560.pool.root.1
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas      1075 Nov 27 05:24 memory_monitor_summary.json
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:24 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas   1888657 Nov 27 05:24 log.47556149._004560.job.log.tgz.1
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas      7943 Nov 27 05:24 heartbeat.json
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas        95 Nov 27 05:25 pilot_heartbeat.json
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas      4940 Nov 27 05:25 pilotlog.txt
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:25 boinc_mmap_file
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:25 wrapper_checkpoint.txt
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas   5110226 Nov 27 05:25 log.47556149._004560.job.log.1
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas       353 Nov 27 05:25 output.list
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:25 runtime_log
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas   7014400 Nov 27 05:25 result.tar.gz
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 05:25 runtime_log.err
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas       665 Nov 27 05:25 IIHMDmnowh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN2LKDmup9WXn.diag
[2025-11-27 05:25:54] -rw-r--r--. 1 boincer umatlas     21915 Nov 27 05:25 stderr.txt
[2025-11-27 05:25:54] HITS file was successfully produced:
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas 902491227 Nov 27 05:23 shared/HITS.pool.root.1
[2025-11-27 05:25:54]  *** Contents of shared directory: ***
[2025-11-27 05:25:54] total 1289648
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas 410469631 Nov 26 17:28 ATLAS.root_0
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:28 start_atlas.sh
[2025-11-27 05:25:54] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 17:28 input.tar.gz
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas 902491227 Nov 27 05:23 HITS.pool.root.1
[2025-11-27 05:25:54] -rw-------. 1 boincer umatlas   7014400 Nov 27 05:25 result.tar.gz
05:25:55 (143315): run_atlas exited; CPU time 136535.656322
05:25:55 (143315): called boinc_finish(0)

</stderr_txt>
]]>

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