Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:02:43 (19399): wrapper (7.7.26015): starting
17:02:43 (19399): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 17:02:43] Arguments: --nthreads 12
[2025-11-26 17:02:43] Threads: 12
[2025-11-26 17:02:43] Checking for CVMFS
[2025-11-26 17:02:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:02:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:02:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:02:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:02:44] 2.11.2.0 2991 288210 96632 153335 2 82 19931673 20275201 1 130560 1 130008191 99.963 17594048 14606 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 17:02:44] CVMFS is ok
[2025-11-26 17:02:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:02:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:02:44] Further information can be found at the LHC@home message board.
[2025-11-26 17:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:02:44] Checking for apptainer binary...
[2025-11-26 17:02:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:02:44] Running /usr/bin/apptainer --version
[2025-11-26 17:02:44] apptainer version 1.3.2-1.el7
[2025-11-26 17:02:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:02:45] c-205-32.aglt2.org
[2025-11-26 17:02:45] apptainer works
[2025-11-26 17:02:45] Set ATHENA_PROC_NUMBER=12
[2025-11-26 17:02:45] Set ATHENA_CORE_NUMBER=12
[2025-11-26 17:02:45] Starting ATLAS job with PandaID=6891572736
[2025-11-26 17:02:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:22:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:22:49] 2025-11-27 05:21:58,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:22:49] 2025-11-27 05:21:59,844 | INFO     | time since job start (26340s) is within the limit (172800.0s)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,128 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 00:22:49] 2025-11-27 05:22:00,132 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-27 00:22:49] 2025-11-27 05:22:00,135 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891572736/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,136 | INFO     | extracted standard info from prmon json
[2025-11-27 00:22:49] 2025-11-27 05:22:00,136 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:22:49] 2025-11-27 05:22:00,136 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:22:49] 2025-11-27 05:22:00,144 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:22:49] 2025-11-27 05:22:00,144 | INFO     | sum of square deviations: 24999352020.657436
[2025-11-27 00:22:49] 2025-11-27 05:22:00,148 | INFO     | sum of deviations: 387249983509.9074
[2025-11-27 00:22:49] 2025-11-27 05:22:00,148 | INFO     | mean x: 1764207753.6620371
[2025-11-27 00:22:49] 2025-11-27 05:22:00,148 | INFO     | mean y: 3426335.787037037
[2025-11-27 00:22:49] 2025-11-27 05:22:00,149 | INFO     | intersect: -27324858931.332783
[2025-11-27 00:22:49] 2025-11-27 05:22:00,149 | INFO     | chi2: 6.033949942272102
[2025-11-27 00:22:49] 2025-11-27 05:22:00,150 | INFO     | sum of square deviations: 24141347980.524513
[2025-11-27 00:22:49] 2025-11-27 05:22:00,153 | INFO     | sum of deviations: 555120421670.7052
[2025-11-27 00:22:49] 2025-11-27 05:22:00,154 | INFO     | mean x: 1764207601.1639345
[2025-11-27 00:22:49] 2025-11-27 05:22:00,154 | INFO     | mean y: 3456140.318501171
[2025-11-27 00:22:49] 2025-11-27 05:22:00,154 | INFO     | intersect: -40563775990.33357
[2025-11-27 00:22:49] 2025-11-27 05:22:00,154 | INFO     | chi2: 2.9062558558858527
[2025-11-27 00:22:49] 2025-11-27 05:22:00,154 | INFO     | current chi2=2.9062558558858527 (change=51.834935926042945 %)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,155 | INFO     | sum of square deviations: 23303204777.888706
[2025-11-27 00:22:49] 2025-11-27 05:22:00,159 | INFO     | sum of deviations: 618900839363.0082
[2025-11-27 00:22:49] 2025-11-27 05:22:00,159 | INFO     | mean x: 1764207448.6658769
[2025-11-27 00:22:49] 2025-11-27 05:22:00,159 | INFO     | mean y: 3467716.021327014
[2025-11-27 00:22:49] 2025-11-27 05:22:00,159 | INFO     | intersect: -46851438345.04565
[2025-11-27 00:22:49] 2025-11-27 05:22:00,160 | INFO     | chi2: 2.267799750425102
[2025-11-27 00:22:49] 2025-11-27 05:22:00,160 | INFO     | current chi2=2.267799750425102 (change=21.968337858751372 %)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,160 | INFO     | right removable region: 421
[2025-11-27 00:22:49] 2025-11-27 05:22:00,160 | INFO     | sum of square deviations: 24141305280.524498
[2025-11-27 00:22:49] 2025-11-27 05:22:00,164 | INFO     | sum of deviations: 255868077265.81946
[2025-11-27 00:22:49] 2025-11-27 05:22:00,164 | INFO     | mean x: 1764207906.1639345
[2025-11-27 00:22:49] 2025-11-27 05:22:00,165 | INFO     | mean y: 3449604.4168618266
[2025-11-27 00:22:49] 2025-11-27 05:22:00,165 | INFO     | intersect: -18694979482.244183
[2025-11-27 00:22:49] 2025-11-27 05:22:00,165 | INFO     | chi2: 3.935978354264038
[2025-11-27 00:22:49] 2025-11-27 05:22:00,165 | INFO     | current chi2=3.935978354264038 (change=34.76945629446283 %)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,166 | INFO     | sum of square deviations: 23303145424.218098
[2025-11-27 00:22:49] 2025-11-27 05:22:00,170 | INFO     | sum of deviations: 224827459627.86285
[2025-11-27 00:22:49] 2025-11-27 05:22:00,170 | INFO     | mean x: 1764208058.6635072
[2025-11-27 00:22:49] 2025-11-27 05:22:00,170 | INFO     | mean y: 3455245.646919431
[2025-11-27 00:22:49] 2025-11-27 05:22:00,170 | INFO     | intersect: -17017526637.429867
[2025-11-27 00:22:49] 2025-11-27 05:22:00,170 | INFO     | chi2: 3.8950387607599337
[2025-11-27 00:22:49] 2025-11-27 05:22:00,171 | INFO     | current chi2=3.8950387607599337 (change=1.0401376689420179 %)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,171 | INFO     | left removable region: 20
[2025-11-27 00:22:49] 2025-11-27 05:22:00,171 | INFO     | sum of square deviations: 19994491361.80549
[2025-11-27 00:22:49] 2025-11-27 05:22:00,175 | INFO     | sum of deviations: 402722653419.03204
[2025-11-27 00:22:49] 2025-11-27 05:22:00,175 | INFO     | mean x: 1764208028.1670823
[2025-11-27 00:22:49] 2025-11-27 05:22:00,175 | INFO     | mean y: 3507773.805486284
[2025-11-27 00:22:49] 2025-11-27 05:22:00,175 | INFO     | intersect: -35530606369.44369
[2025-11-27 00:22:49] 2025-11-27 05:22:00,175 | INFO     | chi2: 0.0693853957769509
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | current memory leak: 20.14 B/s (using 401 data points, chi2=0.07)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | could have reported an average CPU frequency of 2412 MHz (18 samples)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | ..............................
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | . Timing measurements:
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | . get job = 0 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | . initial setup = 2 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,176 | INFO     | . payload setup = 7 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,177 | INFO     | . stage-in = 0 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,177 | INFO     | . payload execution = 26301 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,177 | INFO     | . stage-out = 3 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,177 | INFO     | . log creation = 0 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,177 | INFO     | ..............................
[2025-11-27 00:22:49] 2025-11-27 05:22:00,751 | INFO     | 
[2025-11-27 00:22:49] 2025-11-27 05:22:00,751 | INFO     | job summary report
[2025-11-27 00:22:49] 2025-11-27 05:22:00,751 | INFO     | --------------------------------------------------
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | PanDA job id: 6891572736
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | task id: 47493068
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | errors: (none)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | pilot state: finished 
[2025-11-27 00:22:49] 2025-11-27 05:22:00,752 | INFO     | transexitcode: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | exeerrorcode: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | exeerrordiag: 
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | exitcode: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | exitmsg: OK
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | cpuconsumptiontime: 301780 s
[2025-11-27 00:22:49] 2025-11-27 05:22:00,753 | INFO     | nevents: 1000
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | neventsw: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | pid: 30548
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | pgrp: 30548
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | corecount: 12
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | event service: False
[2025-11-27 00:22:49] 2025-11-27 05:22:00,754 | INFO     | sizes: {0: 2284190, 1: 2284332, 5: 2284594, 11: 2284650, 26312: 2322072, 26316: 2331066, 26318: 2331250, 26324: 2331496}
[2025-11-27 00:22:49] 2025-11-27 05:22:00,755 | INFO     | --------------------------------------------------
[2025-11-27 00:22:49] 2025-11-27 05:22:00,755 | INFO     | 
[2025-11-27 00:22:49] 2025-11-27 05:22:00,755 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 00:22:49] 2025-11-27 05:22:00,778 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,778 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,778 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:22:49] 2025-11-27 05:22:00,781 | INFO     | job 6891572736 has completed (purged errors)
[2025-11-27 00:22:49] 2025-11-27 05:22:00,782 | INFO     | overall cleanup function is called
[2025-11-27 00:22:49] 2025-11-27 05:22:00,965 | INFO     | PID=23406 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 00:22:49] 2025-11-27 05:22:01,799 | INFO     | --- collectZombieJob: --- 10, [30548]
[2025-11-27 00:22:49] 2025-11-27 05:22:01,799 | INFO     | zombie collector waiting for pid 30548
[2025-11-27 00:22:49] 2025-11-27 05:22:01,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:22:49] 2025-11-27 05:22:01,799 | INFO     | collected zombie processes
[2025-11-27 00:22:49] 2025-11-27 05:22:01,799 | INFO     | will attempt to kill all subprocesses of pid=30548
[2025-11-27 00:22:49] 2025-11-27 05:22:01,892 | INFO     | process IDs to be killed: [30548] (in reverse order)
[2025-11-27 00:22:49] 2025-11-27 05:22:01,944 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:22:49] 2025-11-27 05:22:01,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:22:49] 2025-11-27 05:22:01,947 | INFO     | did not find any defunct processes belonging to 30548
[2025-11-27 00:22:49] 2025-11-27 05:22:01,950 | INFO     | did not find any defunct processes belonging to 30548
[2025-11-27 00:22:49] 2025-11-27 05:22:01,952 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:22:49] 2025-11-27 05:22:01,952 | INFO     | ready for new job
[2025-11-27 00:22:49] 2025-11-27 05:22:01,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:22:49] 2025-11-27 05:22:01,954 | INFO     | ***************************************
[2025-11-27 00:22:49] 2025-11-27 05:22:01,954 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:22:49] 2025-11-27 05:22:01,955 | INFO     | ***************************************
[2025-11-27 00:22:49] 2025-11-27 05:22:01,955 | INFO     | 
[2025-11-27 00:22:49] 2025-11-27 05:22:01,955 | INFO     | architecture information:
[2025-11-27 00:22:49] 2025-11-27 05:22:01,956 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:22:49] 2025-11-27 05:22:01,972 | INFO     | cat /etc/os-release:
[2025-11-27 00:22:49] NAME="CentOS Linux"
[2025-11-27 00:22:49] VERSION="7 (Core)"
[2025-11-27 00:22:49] ID="centos"
[2025-11-27 00:22:49] ID_LIKE="rhel fedora"
[2025-11-27 00:22:49] VERSION_ID="7"
[2025-11-27 00:22:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:22:49] ANSI_COLOR="0;31"
[2025-11-27 00:22:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:22:49] HOME_URL="https://www.centos.org/"
[2025-11-27 00:22:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:22:49] 
[2025-11-27 00:22:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:22:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:22:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:22:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:22:49] 
[2025-11-27 00:22:49] 2025-11-27 05:22:01,972 | INFO     | ***************************************
[2025-11-27 00:22:49] 2025-11-27 05:22:02,475 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 00:22:49] 2025-11-27 05:22:02,491 | INFO     | sufficient remaining disk space (28238151680 B)
[2025-11-27 00:22:49] 2025-11-27 05:22:02,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:22:49] 2025-11-27 05:22:02,492 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:22:49] 2025-11-27 05:22:02,492 | INFO     | update_server=False
[2025-11-27 00:22:49] 2025-11-27 05:22:02,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:22:49] 2025-11-27 05:22:02,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:22:49] 2025-11-27 05:22:02,493 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:22:49] 2025-11-27 05:22:02,493 | INFO     | aborting loop
[2025-11-27 00:22:49] 2025-11-27 05:22:03,031 | INFO     | all payload control threads have been joined
[2025-11-27 00:22:49] 2025-11-27 05:22:03,067 | INFO     | all data control threads have been joined
[2025-11-27 00:22:49] 2025-11-27 05:22:03,498 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,498 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,664 | INFO     | [job] validate thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,685 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,802 | INFO     | all job control threads have been joined
[2025-11-27 00:22:49] 2025-11-27 05:22:03,811 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,930 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:03,979 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,036 | INFO     | [payload] control thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:22:49] 2025-11-27 05:22:04,071 | INFO     | [data] control thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,124 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,499 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,715 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:04,807 | INFO     | [job] control thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:05,269 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:22:49] 2025-11-27 05:22:06,275 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:08,055 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:13,094 | INFO     | job.realtimelogging is not enabled
[2025-11-27 00:22:49] 2025-11-27 05:22:14,099 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:22:49] 2025-11-27 05:22:33,153 | INFO     | PID=23406 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 00:22:49] 2025-11-27 05:22:33,153 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:22:49] 2025-11-27 05:22:33,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:22:49] 2025-11-27 05:22:33,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:22:49] 2025-11-27 05:22:42,478 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:22:49] 2025-11-27 05:22:44,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139799841158976)>', '<ExcThread(monitor, started 139798996035328)>']
[2025-11-27 00:22:49] 2025-11-27 05:22:45,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:22:49] 2025-11-27 05:22:45,215 | INFO     | [monitor] control thread has ended
[2025-11-27 00:22:49] 2025-11-27 05:22:49,261 | INFO     | all workflow threads have been joined
[2025-11-27 00:22:49] 2025-11-27 05:22:49,261 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:22:49] 2025-11-27 05:22:49,261 | INFO     | traces error code: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:49,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:22:49] 2025-11-27 05:22:49,356 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:22:49] 2025-11-27 05:22:49,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:22:49] 2025-11-27 05:22:49,363 [wrapper] pilotpid: 23406
[2025-11-27 00:22:49] 2025-11-27 05:22:49,367 [wrapper] Pilot exit status: 0
[2025-11-27 00:22:49] 2025-11-27 05:22:49,381 [wrapper] pandaids: 6891572736
[2025-11-27 00:22:49] 2025-11-27 05:22:49,427 [wrapper] cleanup supervisor_pilot 19663 23407
[2025-11-27 00:22:49] 2025-11-27 05:22:49,431 [wrapper] Test setup, not cleaning
[2025-11-27 00:22:49] 2025-11-27 05:22:49,434 [wrapper] apfmon messages muted
[2025-11-27 00:22:49] 2025-11-27 05:22:49,438 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:22:49] 2025-11-27 05:22:49,441 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:22:49]  *** Error codes and diagnostics ***
[2025-11-27 00:22:49]     "exeErrorCode": 0,
[2025-11-27 00:22:49]     "exeErrorDiag": "",
[2025-11-27 00:22:49]     "pilotErrorCode": 0,
[2025-11-27 00:22:49]     "pilotErrorDiag": "",
[2025-11-27 00:22:49]  *** Listing of results directory ***
[2025-11-27 00:22:49] total 1321716
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 11:24 pilot3.tar.gz
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 11:28 queuedata.json
[2025-11-27 00:22:49] -rwx------ 1 boincer umatlas     36292 Nov 18 11:29 runpilot2-wrapper.sh
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas       100 Nov 26 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:22:49] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 17:02 run_atlas
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas       105 Nov 26 17:02 job.xml
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas 409520957 Nov 26 17:02 EVNT.47493065._000351.pool.root.1
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 17:02 start_atlas.sh
[2025-11-27 00:22:49] drwxrwx--x 2 boincer umatlas      4096 Nov 26 17:02 shared
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 17:02 input.tar.gz
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas         0 Nov 26 17:02 boinc_lockfile
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas      2773 Nov 26 17:02 pandaJob.out
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas    991538 Nov 26 17:02 agis_schedconf.cvmfs.json
[2025-11-27 00:22:49] drwx------ 5 boincer umatlas      4096 Nov 26 17:03 pilot3
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas       533 Nov 27 00:12 boinc_task_state.xml
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 00:21 init_data.xml
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas 928220975 Nov 27 00:21 HITS.47493068._003508.pool.root.1
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas      1065 Nov 27 00:21 memory_monitor_summary.json
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas   1516240 Nov 27 00:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas   2205739 Nov 27 00:21 log.47493068._003508.job.log.tgz.1
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas      8669 Nov 27 00:22 heartbeat.json
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 00:22 boinc_mmap_file
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas        29 Nov 27 00:22 wrapper_checkpoint.txt
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas        95 Nov 27 00:22 pilot_heartbeat.json
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas      4818 Nov 27 00:22 pilotlog.txt
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas   3686139 Nov 27 00:22 log.47493068._003508.job.log.1
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas       353 Nov 27 00:22 output.list
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas       620 Nov 27 00:22 runtime_log
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas   5908480 Nov 27 00:22 result.tar.gz
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas      8706 Nov 27 00:22 runtime_log.err
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas       670 Nov 27 00:22 P79NDmOldf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeoFKDmVwF96m.diag
[2025-11-27 00:22:49] -rw-r--r-- 1 boincer umatlas     21416 Nov 27 00:22 stderr.txt
[2025-11-27 00:22:49] HITS file was successfully produced:
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas 928220975 Nov 27 00:21 shared/HITS.pool.root.1
[2025-11-27 00:22:49]  *** Contents of shared directory: ***
[2025-11-27 00:22:49] total 1312764
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas 409520957 Nov 26 17:02 ATLAS.root_0
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas     15120 Nov 26 17:02 start_atlas.sh
[2025-11-27 00:22:49] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 17:02 input.tar.gz
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas 928220975 Nov 27 00:21 HITS.pool.root.1
[2025-11-27 00:22:49] -rw------- 1 boincer umatlas   5908480 Nov 27 00:22 result.tar.gz
00:22:50 (19399): run_atlas exited; CPU time 294828.035426
00:22:50 (19399): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN